mRNA_P-wetherbeei_contig1787.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: A0A6H5JUF1_9PHAE (Thioesterase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF1_9PHAE) HSP 1 Score: 159 bits (401), Expect = 3.950e-45 Identity = 85/188 (45.21%), Postives = 117/188 (62.23%), Query Frame = 1
Query: 1 MNPPSSSKWICCKPPRPEAKLRLFCLPWAGGNSTAFNRWRD-LPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSELPRDDLVAYLVAKGGIPAQLAEEREVLDFYLPPIRADY 561
M+ + KW+ C+ + +A +RLFC WAGG++++FN+W +P VE+ A+E PGRM R E L SV V +A AL G L +PFALFGHS G+LV FELAR L G P+ L+VSG PPD P+S+LPRD LV +L+ GG+P +L ++ E++D++LPPIRADY
Sbjct: 1 MSSSALEKWVVCRRVKADASIRLFCAAWAGGSASSFNKWTSKMPEAVELHALEFPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLL---DKPFALFGHSFGSLVMFELARKLKEDAGKIPVYLVVSGCCPPDMCVGGGRSP-----PISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADY 180
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: UPI0018A84C78 (alpha/beta fold hydrolase n=1 Tax=Nonomuraea cypriaca TaxID=1187855 RepID=UPI0018A84C78) HSP 1 Score: 151 bits (381), Expect = 5.190e-42 Identity = 80/183 (43.72%), Postives = 111/183 (60.66%), Query Frame = 1
Query: 13 SSSKWICCKPPRPEAKLRLFCLPWAGGNSTAFNRW-RDLPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSELPRDDLVAYLVAKGGIPAQLAEEREVLDFYLPPIRAD 558
SSS WI PRP+A++RLFCLP AGG ++++ W R LP +EVCA +LPGR +R EP + +H LA + A L PFA+FGHS+GA++A+E+A+ L+ + G QPLRL SGAR P +++LP D+L+ L A GGIP +L + RE LD +P +R D
Sbjct: 22 SSSSWIRIPVPRPQARIRLFCLPHAGGGASSYTAWARGLPTHIEVCAAQLPGRETRIEEPAITDIHAMARTLADVMAAAADL-----PFAIFGHSMGAVIAYEVAQELLRRGGPQPLRLFASGARAPHLPLSGPR--------LADLPTDELIRGLAAIGGIPVELLDRREYLDLIVPSLRGD 191
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: A0A150QNQ8_SORCE (Gramicidin dehydrogenase n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150QNQ8_SORCE) HSP 1 Score: 140 bits (353), Expect = 5.230e-38 Identity = 79/185 (42.70%), Postives = 111/185 (60.00%), Query Frame = 1
Query: 7 PPSSSKWICCKPPRPEAKLRLFCLPWAGGNSTAFNRW-RDLPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSELPRDDLVAYLVAKGGIPAQLAEEREVLDFYLPPIRAD 558
P +S W+ C P P ++LRLFC P+AGG ++ ++ W R+LPA E+CA++LPGR +R +EP E + V LA AL+ G+L ++PFA +GHSLGALV+FELAR L + P L VSG R P Q P+ LP D +A+L GG P ++ E ++L +LP +RAD
Sbjct: 4 PSTSDAWVGCPRPNPASRLRLFCFPYAGGGASIYSAWWRELPAHTELCAIKLPGREARLSEPPFERLTPLVQALATALD--GWL---AKPFAFYGHSLGALVSFELARELRRRGAPLPRHLFVSGRRAPHQPISA---------PLHGLPDDAFLAWLRRMGGTPEEVLREPDLLALFLPVLRAD 174
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: A0A2L0EIW3_SORCE (Thioesterase n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0EIW3_SORCE) HSP 1 Score: 139 bits (350), Expect = 1.550e-37 Identity = 83/194 (42.78%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 1 MNPPSSSK---WICCKPPRPEAKLRLFCLPWAGGNSTAFNRW-RDLPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSE----LPRDDLVAYLVAKGGIPAQLAEEREVLDFYLPPIRAD 558
MNP SS W+ P P A+LRLFC P+AGG+++A++ W R+LPA VE+C ++LPGR +R EP + + V L+AAL G +L ++PFAL+GHSLGALVAFELAR L + P L+VSG R P +P+ E LP + VA++ GG P ++ E E+++ +LP +RAD
Sbjct: 1 MNPAGSSSADVWVGLPRPNPAARLRLFCFPYAGGSASAYSAWWRELPASVELCTIKLPGREARLREPPFQRLTPLVGALSAAL--GPWL---TKPFALYGHSLGALVAFELARALRRRGAPLPRHLLVSGRRAPH-------------LPMGEAFHALPDPEFVAWIRRMGGTPDEVLREPELMELFLPVLRAD 176
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: V5UWD8_SORCE (Type II thioesterase n=1 Tax=Sorangium cellulosum TaxID=56 RepID=V5UWD8_SORCE) HSP 1 Score: 137 bits (345), Expect = 8.450e-37 Identity = 80/183 (43.72%), Postives = 104/183 (56.83%), Query Frame = 1
Query: 13 SSSKWICCKPPRPEAKLRLFCLPWAGGNSTAFNRW-RDLPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSELPRDDLVAYLVAKGGIPAQLAEEREVLDFYLPPIRAD 558
+S WI C P P A+LRLFCLP+AGG STAF+ W R LPA+VE+CA++LPGR +R EP + + V LA G ++PF L+GHSLGALV+FE+ R L + P L+VSG RPP P+ LVA+L GG P ++ E E+L LP +RAD
Sbjct: 6 TSDTWISCTRPNPAARLRLFCLPYAGGGSTAFSSWQRQLPAQVELCALKLPGREARMREPPFDRLTPLVQALAT-----GIAPWLTKPFVLYGHSLGALVSFEVTRELRRRRAPLPRHLLVSGRRPPHMQPGPE--------PLHGASDQALVAWLRRVGGTPDEVLREPELLAMILPVLRAD 175
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: UPI00168557C2 (thioesterase II family protein n=1 Tax=Cylindrospermum sp. FACHB-282 TaxID=2692794 RepID=UPI00168557C2) HSP 1 Score: 137 bits (344), Expect = 1.020e-36 Identity = 75/187 (40.11%), Postives = 106/187 (56.68%), Query Frame = 1
Query: 4 NPPSSSKWICCKPPRPEAKLRLFCLPWAGGNSTAFNRWRD-LPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSELPRDDLVAYLVAKGGIPAQLAEEREVLDFYLPPIRADY 561
N S+ WI C P P+AKLRLFCLP+AGGN+ + W + LP VEVCAVEL GR + P + + V+++AA L + +PFA+FGHS+GAL++FEL R+L +KYG PL L +S R P P+ LP + + L G P + E +E++ +LP +RAD+
Sbjct: 3 NKSPSNSWITCFQPHPQAKLRLFCLPYAGGNAMIYRTWANGLPETVEVCAVELAGRGKQIQLPPMTRLETLVSEIAANL-----IPFLDKPFAIFGHSMGALISFELTRLLGSKYGLSPLHLFISARRAPQ--------IPSRKPPIYNLPEAEFLEELRLLNGTPKAVLENKELMQLFLPLLRADF 176
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: A0A849M2S6_9BACT (Thioesterase n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A849M2S6_9BACT) HSP 1 Score: 136 bits (342), Expect = 2.260e-36 Identity = 73/184 (39.67%), Postives = 105/184 (57.07%), Query Frame = 1
Query: 13 SSSKWICCKPPRPEAKLRLFCLPWAGGNSTAFNRWRD-LPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSELPRDDLVAYLVAKGGIPAQLAEEREVLDFYLPPIRADY 561
+S+ WI P P AKL+LFCLP+AGG+S A+ W D LPA VE+CA+E+PGR R EPLL+++ E V +LA G + RPF LFGHS+GA FEL +L +KY P L SG P P+ +LP+++ + + + G P ++ E+++ +P IRAD+
Sbjct: 5 NSNPWIVKLKPNPNAKLKLFCLPFAGGSSVAYRDWNDVLPATVELCAIEIPGRGQRLGEPLLKNLPELVTKLAE-----GIKEELDRPFVLFGHSMGAATGFELTHLLQSKYQKTPEHLFFSGRGAPQ--------IPERDEPIHKLPKNEFIDKIRSFNGTPKEVLAHEELMELVIPIIRADF 175
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: A0A7S3UXQ5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXQ5_HETAK) HSP 1 Score: 138 bits (347), Expect = 2.830e-36 Identity = 76/181 (41.99%), Postives = 107/181 (59.12%), Query Frame = 1
Query: 22 KWICCKPPRPEAKLRLFCLPWAGGNSTAFNRWRDLPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSELPRDDLVAYLVAKG--GIPAQLAEEREVLDFYLPPIRAD 558
KW C+ RP+AKLRLFCLPWAGGNST++ RW + + E+ +VELPGRM R EPL++ + + L+ A+ +R +PFALFGH GA++A+EL R L ++ PLRL+V+G+R P VS L +L+A+L A G G+P + E+LD P + AD
Sbjct: 72 KWFICRCERPDAKLRLFCLPWAGGNSTSYARWHEAFPDYEIVSVELPGRMMRAREPLVDEIDFIIHSLSTAMQRLALIRG--KPFALFGHGYGAVLAYELGRGLHARFRRAPLRLLVAGSRAPPHVRFQER--------VSALAPPELLAHLRALGPAGVPEVILGRPELLDRVKPVLLAD 242
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: A0A150S911_SORCE (Gramicidin dehydrogenase n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150S911_SORCE) HSP 1 Score: 135 bits (340), Expect = 4.610e-36 Identity = 77/185 (41.62%), Postives = 108/185 (58.38%), Query Frame = 1
Query: 7 PPSSSKWICCKPPRPEAKLRLFCLPWAGGNSTAFNRW-RDLPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSELPRDDLVAYLVAKGGIPAQLAEEREVLDFYLPPIRAD 558
P +S W+ C P P ++LRLFC P+AGG + +++ W RDLPA E+CA++LPGR +R +EP + + V LA AL G+L ++PFA +GHSLGALV+FELAR L + P L VSG R P P+ L + +A+L GG P ++ E E+L +LP +RAD
Sbjct: 4 PSTSDTWVGCPRPNPASRLRLFCFPYAGGGAVSYSTWWRDLPAHTELCAIKLPGREARMSEPPFDRLTPLVQALATALE--GWL---TKPFAFYGHSLGALVSFELARELRRRGAPLPRHLFVSGRRAPH---------LPTAAPLHGLSDAEFLAWLRRMGGTPEEVLREPELLALFLPVLRAD 174
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Match: A0A0M0SMK7_9CYAN (Gramicidin dehydrogenase n=1 Tax=Hapalosiphon sp. MRB220 TaxID=1704290 RepID=A0A0M0SMK7_9CYAN) HSP 1 Score: 134 bits (338), Expect = 7.670e-36 Identity = 75/187 (40.11%), Postives = 99/187 (52.94%), Query Frame = 1
Query: 4 NPPSSSKWICCKPPRPEAKLRLFCLPWAGGNSTAFNRW-RDLPAEVEVCAVELPGRMSRRAEPLLESVHETVAQLAAALNAGGFLRDSSRPFALFGHSLGALVAFELARVLVTKYGAQPLRLIVSGARPPDQXXXXXXXXXXXXMPVSELPRDDLVAYLVAKGGIPAQLAEEREVLDFYLPPIRADY 561
N + W C P PEAK+RLFC P+AGG++ F W DLP VE+CA+ELPGR R PL + V +LA+ L + +PFA FGHS+G LV+FELAR+L +YG P L VS R P P+ LP + + L G P L E E++ ++P IRAD+
Sbjct: 3 NTSNLDSWFVCYKPNPEAKIRLFCFPYAGGSANIFRSWSNDLPPTVEICAIELPGRGMRIKLPLFTQLEPLVTELASVLKP-----NLDKPFAFFGHSMGGLVSFELARLLRKQYGVIPSHLFVSARRAPQLVSNKP--------PIHRLPDAEFLEELRHLNGTPEALLENDELMQLFMPIIRADF 176 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1787.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1787.3.1 >prot_P-wetherbeei_contig1787.3.1 ID=prot_P-wetherbeei_contig1787.3.1|Name=mRNA_P-wetherbeei_contig1787.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=189bp MNPPSSSKWICCKPPRPEAKLRLFCLPWAGGNSTAFNRWRDLPAEVEVCAback to top mRNA from alignment at P-wetherbeei_contig1787:5468..6553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1787.3.1 ID=mRNA_P-wetherbeei_contig1787.3.1|Name=mRNA_P-wetherbeei_contig1787.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig1787:5468..6553+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1787:5468..6553+ >mRNA_P-wetherbeei_contig1787.3.1 ID=mRNA_P-wetherbeei_contig1787.3.1|Name=mRNA_P-wetherbeei_contig1787.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=567bp|location=Sequence derived from alignment at P-wetherbeei_contig1787:5468..6553+ (Phaeothamnion wetherbeei SAG_119_79)back to top |