mRNA_P-wetherbeei_contig1783.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1783.3.1
Unique NamemRNA_P-wetherbeei_contig1783.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A836CIE5_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE5_9STRA)

HSP 1 Score: 294 bits (753), Expect = 2.260e-97
Identity = 143/169 (84.62%), Postives = 156/169 (92.31%), Query Frame = 2 
Query:  308 ANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQFFP 814
            ANTLRPYL TIR TLDASLCLRNFPSQTVERHNKPEVEV SSKELL NPI ICRNEQERCL+E+SINS+RVSIG+KQADEIE++LCRKFT FLMQRSE FI+MRRK   GYDISFL+TH HLE MWKHKL+DFV++FME+IDKEISGMKIAINARARIVASE+VRQF P
Sbjct:    2 ANTLRPYLTTIRHTLDASLCLRNFPSQTVERHNKPEVEVQSSKELLLNPITICRNEQERCLVESSINSVRVSIGVKQADEIESILCRKFTRFLMQRSEQFIVMRRKAAPGYDISFLITHAHLEGMWKHKLVDFVIEFMEDIDKEISGMKIAINARARIVASEYVRQFCP 170
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: D7FKQ4_ECTSI (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ4_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 8.570e-95
Identity = 133/167 (79.64%), Postives = 154/167 (92.22%), Query Frame = 2 
Query:  308 ANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 808
            ANTLRPYLN IRGTLDA+LCLRNFPSQTVERHNKPEVE  SSKELL NP+ ICRNEQE+CLIETS+NS+RVSI +KQADEIE +LC KFT+FLMQR+E F++MRRKP EG+DISFLVTH+HLEK+WKHKL+DF++QFME+IDKEISGMKIAINAR RI+A +F+ QF
Sbjct:    2 ANTLRPYLNAIRGTLDAALCLRNFPSQTVERHNKPEVETRSSKELLLNPVTICRNEQEKCLIETSVNSVRVSIAVKQADEIETILCHKFTSFLMQRAEQFVVMRRKPAEGFDISFLVTHSHLEKLWKHKLIDFIIQFMEDIDKEISGMKIAINARGRIIAQQFMLQF 168
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A7S2BQQ1_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQQ1_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.350e-83
Identity = 122/170 (71.76%), Postives = 145/170 (85.29%), Query Frame = 2 
Query:  299 ILQANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 808
            +  A TLRPYLN IR TLDA+LCLRNFPSQ VERHNKPE+E+  +KELL NPI ICR + ERCLIE S+NS+R+SI IKQADEIE VLC KFT FLMQR++ FIIMRRK  EGY ISFLVTH HLEKMWK+KL+DF++ FME+ID+EIS MK+A+NARAR+VA EF+++F
Sbjct:    9 LAMAATLRPYLNCIRSTLDAALCLRNFPSQIVERHNKPEIEIKGNKELLLNPITICRTKTERCLIEPSVNSVRISIQIKQADEIEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKNKLIDFIISFMEDIDREISAMKLAVNARARVVAKEFLKEF 178
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A7S2CG59_9STRA (Actin-related protein 2/3 complex subunit 4 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CG59_9STRA)

HSP 1 Score: 258 bits (659), Expect = 4.020e-83
Identity = 124/167 (74.25%), Postives = 144/167 (86.23%), Query Frame = 2 
Query:  308 ANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 808
            A+TL+PYL  +R TL+A LCLRNFPSQTVERHNKPEVEV  SKELL NP+ ICR ++ERCLIE S+NS+R+SI IKQADE+E VLC KFT FLMQR++ FIIMRRK  EGY ISFLVTH HLEKMWK KL+DFV+QFME+IDKEIS MK+A+N+RAR VA EFVR+F
Sbjct:    2 ASTLKPYLACVRTTLNAGLCLRNFPSQTVERHNKPEVEVRGSKELLLNPLTICRTDKERCLIEPSVNSVRISIQIKQADELEEVLCHKFTRFLMQRADQFIIMRRKAKEGYSISFLVTHAHLEKMWKDKLIDFVIQFMEDIDKEISAMKLAVNSRARNVAQEFVREF 168
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A024TP77_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TP77_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.480e-82
Identity = 123/169 (72.78%), Postives = 144/169 (85.21%), Query Frame = 2 
Query:  302 LQANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 808
            + ANTL PYLN IR TLD +LCL+NFPSQ VERHNKPEVEV  S+ELL NP+ ICRNE ERC IE SINS RVSI IKQADEIE +LC KF+ FLMQR+E FIIMRRKP+EGY ISFL+ HTHLE ++KHKL+DF++QFME+IDKEIS MKI +NAR R+VA+EF++QF
Sbjct:   49 IMANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 217
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A2D4BNX3_PYTIN (Actin-related protein 2/3 complex subunit 4 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNX3_PYTIN)

HSP 1 Score: 256 bits (655), Expect = 1.570e-82
Identity = 125/167 (74.85%), Postives = 144/167 (86.23%), Query Frame = 2 
Query:  308 ANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 808
            ANTL PYL  IR +LDA+LCLRNFPSQ VERHNKPEVE+  SKELL NPI I RNE E+CLIE SINS RVSI IKQADEIE +LC KFT FLMQR+E FIIMRR PVEGY +SFL+THTHLE ++KHKL+DF++QFME+IDKEIS MKI++NAR RIVA+EF++QF
Sbjct:    2 ANTLAPYLTAIRNSLDAALCLRNFPSQVVERHNKPEVELRLSKELLLNPILIARNENEKCLIEPSINSTRVSICIKQADEIETILCHKFTRFLMQRAEQFIIMRRVPVEGYHMSFLITHTHLESLYKHKLIDFIIQFMEDIDKEISEMKISLNARGRIVATEFMKQF 168
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A067C4Y9_SAPPC (Actin-related protein 2/3 complex subunit 4 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C4Y9_SAPPC)

HSP 1 Score: 256 bits (654), Expect = 2.220e-82
Identity = 121/167 (72.46%), Postives = 145/167 (86.83%), Query Frame = 2 
Query:  308 ANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 808
            ANTL PYLN IR TLD +LCL+NFPSQ VERHNKPEVEV  SKEL+  PI ICRNE E+C IE SINS RVSI IKQADEIE++LC KF+ FLMQR+E FII+RRKP+EGYD+SFL+TH+HLE ++KHKL+DF++QFME+IDKEIS MKI +NAR R+VA+EF++QF
Sbjct:    2 ANTLAPYLNAIRATLDGALCLQNFPSQVVERHNKPEVEVRMSKELILTPIVICRNENEKCCIEPSINSARVSICIKQADEIESILCHKFSRFLMQRAEQFIILRRKPIEGYDMSFLITHSHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: W4GJL2_9STRA (Actin-related protein 2/3 complex subunit 4 n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GJL2_9STRA)

HSP 1 Score: 255 bits (652), Expect = 4.620e-82
Identity = 121/167 (72.46%), Postives = 143/167 (85.63%), Query Frame = 2 
Query:  308 ANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 808
            ANTL PYLN IR TLDA+LCL+NFPSQ VERHNKPE+EV  S+ELL NP+ ICRNE E+C IE SINS RVSI IKQADEIE +LC KF+ FLMQR+E FIIMRRK +EGY ISFL+ HTHLE ++KHKL+DF++QFME+IDKEIS MKI +NAR R+VA+EF++QF
Sbjct:    2 ANTLAPYLNAIRSTLDAALCLQNFPSQVVERHNKPEIEVGLSRELLLNPVVICRNENEKCCIEPSINSTRVSISIKQADEIETILCHKFSRFLMQRAEQFIIMRRKAIEGYSISFLIIHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 168
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: A0A3R6WI01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WI01_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.710e-81
Identity = 123/167 (73.65%), Postives = 143/167 (85.63%), Query Frame = 2 
Query:  308 ANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 808
            ANTL PYLN IR TLD +LCL+NFPSQ VERHNKPEVEV  S+ELL NP+ ICRNE ERC IE SINS RVSI IKQADEIE +LC KF+ FLMQR+E FIIMRRKP+EGY ISFL+ HTHLE ++KHKL+DF++QFME+IDKEIS MKI +NAR R+VA+EF++QF
Sbjct:  104 ANTLAPYLNAIRSTLDGALCLQNFPSQVVERHNKPEVEVGLSRELLLNPVVICRNENERCCIEPSINSTRVSICIKQADEIETILCHKFSRFLMQRAEQFIIMRRKPIEGYSISFLIVHTHLENLYKHKLVDFIIQFMEDIDKEISEMKINLNARGRVVATEFMKQF 270
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BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Match: K3WN29_GLOUD (Actin-related protein 2/3 complex subunit 4 n=27 Tax=Oomycota TaxID=4762 RepID=K3WN29_GLOUD)

HSP 1 Score: 254 bits (648), Expect = 1.740e-81
Identity = 123/167 (73.65%), Postives = 143/167 (85.63%), Query Frame = 2 
Query:  308 ANTLRPYLNTIRGTLDASLCLRNFPSQTVERHNKPEVEVCSSKELLANPIRICRNEQERCLIETSINSIRVSIGIKQADEIENVLCRKFTAFLMQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDKEISGMKIAINARARIVASEFVRQF 808
            ANTL PYL  IR +LD++LCLRNFPSQ VERHNKPEVE+  SKELL NPI ICRNE E+CLIE S+NS RVSI IKQADEIE +LC KF  FLMQR++ FIIMRR PVEGYD+SFLV HTHLE M+KHKL+DF++ FME+IDKEIS MKI++NAR RIVA+EF++QF
Sbjct:    1 ANTLAPYLTAIRHSLDSALCLRNFPSQVVERHNKPEVELRLSKELLLNPILICRNETEKCLIEPSVNSTRVSICIKQADEIETILCHKFNRFLMQRADQFIIMRRVPVEGYDMSFLVIHTHLENMYKHKLIDFIITFMEDIDKEISEMKISLNARGRIVATEFMKQF 167
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1783.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIE5_9STRA2.260e-9784.62Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
D7FKQ4_ECTSI8.570e-9579.64Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A7S2BQQ1_9STRA1.350e-8371.76Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A7S2CG59_9STRA4.020e-8374.25Actin-related protein 2/3 complex subunit 4 n=1 Ta... [more]
A0A024TP77_9STRA1.480e-8272.78Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2D4BNX3_PYTIN1.570e-8274.85Actin-related protein 2/3 complex subunit 4 n=2 Ta... [more]
A0A067C4Y9_SAPPC2.220e-8272.46Actin-related protein 2/3 complex subunit 4 n=4 Ta... [more]
W4GJL2_9STRA4.620e-8272.46Actin-related protein 2/3 complex subunit 4 n=5 Ta... [more]
A0A3R6WI01_9STRA1.710e-8173.65Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
K3WN29_GLOUD1.740e-8173.65Actin-related protein 2/3 complex subunit 4 n=27 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1783contigP-wetherbeei_contig1783:4536..6378 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKQ4
Preferred nameARPC4
PFAMsARPC4
Model size1021
Max annot lvl2759|Eukaryota
KEGG rclassRC00048,RC00116
KEGG koko:K00275,ko:K05755,ko:K16608
KEGG ReactionR00277,R00278,R01710,R01711
KEGG Pathwayko00750,ko01100,ko01120,ko04144,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,map00750,map01100,map01120,map04144,map04666,map04810,map05100,map05130,map05131,map05132
KEGG ModuleM00124
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000147,GO:0000902,GO:0001667,GO:0002009,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003779,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005885,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006950,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007154,GO:0007155,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0008360,GO:0009611,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010631,GO:0010638,GO:0012506,GO:0015629,GO:0016020,GO:0016043,GO:0016192,GO:0016331,GO:0016477,GO:0019899,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0023052,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030041,GO:0030139,GO:0030175,GO:0030479,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031143,GO:0031252,GO:0031334,GO:0031410,GO:0031982,GO:0032271,GO:0032273,GO:0032501,GO:0032502,GO:0032535,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033043,GO:0033627,GO:0034314,GO:0034622,GO:0038093,GO:0038094,GO:0038096,GO:0040011,GO:0042060,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044396,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045010,GO:0045335,GO:0046903,GO:0048013,GO:0048308,GO:0048311,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048729,GO:0048856,GO:0048869,GO:0048870,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051258,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051646,GO:0051674,GO:0051716,GO:0060429,GO:0061024,GO:0061645,GO:0065003,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066,GO:0090130,GO:0090132,GO:0097435,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:0098858,GO:0099568,GO:0110053,GO:0120025,GO:1902903,GO:1902905
Exons3
Evalue5.6e-37
EggNOG OGsKOG1876@1|root,KOG1876@2759|Eukaryota
Ec32 ortholog descriptionActin-related protein 2/3 complex subunit ARPC4 or p20-Arc (Arp2/3 complex 20 kDa subunit)
Ec32 orthologEc-21_001730.1
EC1.4.3.5
DescriptionFunctions as actin-binding component of the Arp2 3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament
Cds size231
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04812
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186128.5088112-UTR-P-wetherbeei_contig1783:4535..50571683186128.5088112-UTR-P-wetherbeei_contig1783:4535..5057Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1783 4536..5057 +
1683186128.5217912-UTR-P-wetherbeei_contig1783:5367..54311683186128.5217912-UTR-P-wetherbeei_contig1783:5367..5431Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1783 5368..5431 +
1683186128.550228-UTR-P-wetherbeei_contig1783:6174..63781683186128.550228-UTR-P-wetherbeei_contig1783:6174..6378Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1783 6175..6378 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186128.531553-CDS-P-wetherbeei_contig1783:5431..54791683186128.531553-CDS-P-wetherbeei_contig1783:5431..5479Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1783 5432..5479 +
1683186128.5407228-CDS-P-wetherbeei_contig1783:5991..61741683186128.5407228-CDS-P-wetherbeei_contig1783:5991..6174Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1783 5992..6174 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1783.3.1prot_P-wetherbeei_contig1783.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1783 5432..6174 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1783.3.1

>prot_P-wetherbeei_contig1783.3.1 ID=prot_P-wetherbeei_contig1783.3.1|Name=mRNA_P-wetherbeei_contig1783.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=77bp
MQRSEHFIIMRRKPVEGYDISFLVTHTHLEKMWKHKLLDFVMQFMEEIDK
EISGMKIAINARARIVASEFVRQFFP*
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mRNA from alignment at P-wetherbeei_contig1783:4536..6378+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1783.3.1 ID=mRNA_P-wetherbeei_contig1783.3.1|Name=mRNA_P-wetherbeei_contig1783.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1843bp|location=Sequence derived from alignment at P-wetherbeei_contig1783:4536..6378+ (Phaeothamnion wetherbeei SAG_119_79)
TCCAACTCTGCGTATACACACAGTGCCCCTGCTAAACGTCCAGACGAGGG
TGCGCGCGGCGAGAGCAGCGCATTTCTTTCCAGCATGGTGAGAGAAAACC
GGGTTTCTCGACCTGCTTTTCCGTCAGCTCTCGTCAGTCTGTGTAGCCGT
TCTGGCATATGGTTTCATGATCTGACACATCATATACCTGCTCCGCAATC
TATCAGCTGCGTTGCAAAACGGATCAAACTTCTGTTGCACAAGCCGCTCT
CCCGCTACCTCTTTGCCCCTCTGCTTGTGCCAACGCGTCGGAAACACTAT
TTTGCAGGCGAATACGTTGCGACCATATCTGAACACAATTCGGGGCACGC
TGGACGCATCGCTCTGCCTACGCAACTTTCCCTCGCAAACCGTGGAGCGC
CACAACAAGCCGGAAGTCGAAGTCTGCTCCAGCAAGGAGCTCCTCGCGAA
CCCGATACGTATTTGCAGAAACGAGCAGGAGCGGTGCCTGATTGAAACTT
CAATCAACTCCATCCGCGTCAGGTGTGTATTTGGTGTGGAGTCATTCTAC
CATTGTTGAAAGAAACAGGAGGTGCACCTTGCCGTTCAAAGAGAAAAACA
TGTACAAATATGCATATTCACTGGTTAGAATTACGGATGAGGTCTTCGGG
GGTTAGATTTCCGCTCTTTTAAGGGACGGGATAGACAACGAGCAGCGGAA
GGAGAAAACTGCCGCGCACGTAGACTGTGGGTGCATATGCCTCTTTTTTG
CGCTGTCCGCAAAACATATTTTCTTCCGCTTTCTTCCGCTCCGATCTTCC
GTCATTTGCTGCACCGACGGTGGCGGCGGCAGCATCGGCATCAAGCAGGC
GGATGAGATTGAGAACGTGCTGTGTCGAAAGTTCACGGCCTTTCTCATGC
AGCGATCAGAGCACTTCATCATCATGCGAAGGAAACCTGTCGAGGTCAGG
GTTCCAGACTGTTGTTGCGTGTCGTGATTGTAGTCTTGCCCCCCTTTCCC
TCTTTTTTATGAGCTCTATGCCTTTCCAGGCGGCGCCCTTTCCTTGCTTG
AACGGAGTTTGCTGTTTCGAACAACAGCGCGCACTTTTTTAACATTATTT
CACCGTTTGCTTTTCATGTTTCCGCCCGTATCCTCGTTTTGTTTGGTGAT
CAGAGAACGCTTCCGAGTGAGCCATTTCTATTTGGATGCGTTGGAGCGAC
GCTTTGGTGCGCTGTGTCTACATTTATTCCATTGGTCGCATGTTGGCCGC
ACTCAAGATCGGAAGAAATCAGAAGGATTTTATGCTCGGCCCAAGTACCC
TGGCTGCCACTAACCTTACATCTTGCCATTACCAGCGTGCCCGCCTGTCT
CGGCTGACTGCCCCCCGCCGCCATTGCTACCTCCTTTCCTCTTTTATAGT
AAACTGTGCATATTCGTTCCTCATTCAAATCGAGACCGCGCCCCGCGCTT
CCACAGGGTTACGACATCAGCTTCCTGGTGACGCACACGCACCTGGAGAA
GATGTGGAAGCACAAGCTGCTCGATTTCGTCATGCAGTTTATGGAGGAGA
TAGACAAGGAGATCAGCGGCATGAAGATCGCCATCAACGCCCGCGCCCGC
ATCGTCGCCTCGGAGTTCGTCCGCCAGTTCTTCCCGTGATAGATTGTAGG
GCGGCGGCGGCAGCGGCGGCAGCGGCGGCAGCGGCGGTGGCGGCCAGCGG
GCTGCGAGAGGCCGCGGAAGATTATCAGAGAGAGCAAGCTCGCGATAAGA
TGGCTATCGTCATGCTCTTGGGCTGGGAGCAACACTTTAAAACGTGAGGT
ACATACATATTGAAAGAATGCAATGCTGCTTCTTGTTTTCTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1783:4536..6378+

>mRNA_P-wetherbeei_contig1783.3.1 ID=mRNA_P-wetherbeei_contig1783.3.1|Name=mRNA_P-wetherbeei_contig1783.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=231bp|location=Sequence derived from alignment at P-wetherbeei_contig1783:4536..6378+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGCGATCAGAGCACTTCATCATCATGCGAAGGAAACCTGTCGAGGG
TTACGACATCAGCTTCCTGGTGACGCACACGCACCTGGAGAAGATGTGGA
AGCACAAGCTGCTCGATTTCGTCATGCAGTTTATGGAGGAGATAGACAAG
GAGATCAGCGGCATGAAGATCGCCATCAACGCCCGCGCCCGCATCGTCGC
CTCGGAGTTCGTCCGCCAGTTCTTCCCGTGA
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