mRNA_P-wetherbeei_contig1778.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA) HSP 1 Score: 142 bits (357), Expect = 5.350e-40 Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = 1
Query: 49 ASIANQQGKYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRSPGTQS 399
A+ A KYPR G+RGAPQ F +KL+EIL+NE +V+ WT+SG F++ + F E+L+ YFR +SSFQRQLNLYGFRKI KGPD GAY H F RD+PE L +VRR P +Q+
Sbjct: 86 AAPAPSTQKYPRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRRMPQSQN 202
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A7S2WU52_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU52_9STRA) HSP 1 Score: 145 bits (365), Expect = 2.890e-38 Identity = 67/117 (57.26%), Postives = 87/117 (74.36%), Query Frame = 1
Query: 52 SIANQQGKYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRSPGTQSA 402
+++ Q +YPR GKRGAPQ FA+KL+EIL NE + + WT SG+ FV+K+ F VL+KYFR +SSFQRQLNLYGFRKI+KG DAGAY H F R +PE+L++VRR P + S+
Sbjct: 149 AVSGQTQRYPRTGKRGAPQVFARKLYEILDNEPPDAISWTTSGTSFVIKEMDAFVTCVLMKYFRHQKYSSFQRQLNLYGFRKISKGSDAGAYAHESFIRGQPELLHFVRRMPQSSSS 265
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.870e-38 Identity = 61/110 (55.45%), Postives = 79/110 (71.82%), Query Frame = 1
Query: 73 KYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRSPGTQSA 402
KYPR G+RGAPQ F +KL+EILS E ++++ WT SG F++K+ F +L+KYFR +SSFQRQLNLYGFRK+ KG D G+Y H F RD+PE+L VRR P + A
Sbjct: 2 KYPRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRRIPQSAGA 111
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA) HSP 1 Score: 142 bits (359), Expect = 7.920e-38 Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 73 KYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRSP 387
+YPR GKRGAPQ F +KL+EIL NE ++ + WT SG FV+KD F VL+KYFR FSSFQRQLNLYGFRKI+KG + GAYCH FF RD+ + L VRR+P
Sbjct: 64 RYPRTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRRTP 168
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK) HSP 1 Score: 141 bits (356), Expect = 8.930e-38 Identity = 64/109 (58.72%), Postives = 86/109 (78.90%), Query Frame = 1
Query: 73 KYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRSPGTQS 399
KYPR G+RGAPQAFA+KL+EIL E +++ W A+G+ F ++D RFS+E+L+KYFR + F+SFQRQLNLYGFRKIT+G DAG+Y H +F + KP++L VRRS + S
Sbjct: 2 KYPRTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSSS 110
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A835YGA3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGA3_9STRA) HSP 1 Score: 141 bits (355), Expect = 4.720e-37 Identity = 68/120 (56.67%), Postives = 86/120 (71.67%), Query Frame = 1
Query: 49 ASIANQQGKYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRS-PGTQSAK 405
+ + N +YPRFGKRGAPQAFA KLFE+LSNE ++V WT SG F + D +F+ E LIKYF+ N +SFQRQLNLYGFRK KG D+G + H F RD+PE+L VRR+ +Q+AK
Sbjct: 8 SEVQNDLKRYPRFGKRGAPQAFATKLFELLSNESPDIVSWTPSGLAFRIHDMEKFTSECLIKYFKHNNAASFQRQLNLYGFRKSLKGEDSGGFQHASFQRDRPELLIEVRRTVQASQAAK 127
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE) HSP 1 Score: 140 bits (353), Expect = 3.660e-36 Identity = 66/112 (58.93%), Postives = 81/112 (72.32%), Query Frame = 1
Query: 49 ASIANQQGKYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRS 384
A+ + Q + R GKRGAPQAFA+KL EIL+ E + W A+GS F + D RFSE++L KY+R + FSSFQRQLNLY FRKI KG DAG Y HP F RD+P+ LY+VRRS
Sbjct: 22 ATAGDGQRERGRIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRRS 133
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A6V2VRS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VRS5_HETAK) HSP 1 Score: 136 bits (343), Expect = 5.450e-36 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 1
Query: 70 GKYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRSPGTQS 399
G +PR G RGAPQ FA+KL++IL E ++V+CW G+ F +KD RFS+EVL+KYFR N +SSFQRQ+NLYGF+KI++GP AGA H F R +P++L V+R P + S
Sbjct: 8 GDFPRTGSRGAPQVFARKLYQILLTESKDVICWNEPGTAFFIKDMDRFSQEVLMKYFRHNNYSSFQRQMNLYGFKKISRGPFAGANMHQQFLRGRPDLLVMVKRKPRSSS 117
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A7S2WKC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKC6_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.210e-36 Identity = 63/111 (56.76%), Postives = 78/111 (70.27%), Query Frame = 1
Query: 55 IANQQGKYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRSP 387
+ Q KYPR GKRGAPQAFA KL+EIL E EV+ W+ +G F +KD F +VL+KYFR +SSFQRQLNLYGFRK TKG D G Y H +F R + ++L +VRR+P
Sbjct: 66 VPGDQRKYPRTGKRGAPQAFAHKLYEILEAESTEVIAWSGTGRAFFIKDMDIFVSQVLLKYFRHVKYSSFQRQLNLYGFRKATKGQDVGGYYHHYFMRSRRDLLPFVRRTP 176
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Match: A0A6H5JVV9_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVV9_9PHAE) HSP 1 Score: 135 bits (341), Expect = 1.990e-34 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 73 KYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTASGSGFVLKDPRRFSEEVLIKYFRRNIFSSFQRQLNLYGFRKITKGPDAGAYCHPFFHRDKPEMLYYVRRSPGTQSAK 405
KYPRFGKRGAPQAF KL+EIL E+ ++V WTA+G GF ++D R S EVL ++F+++ FSSFQRQLNLYGFRKITKG ++G+Y HP F R + L +RRS A+
Sbjct: 49 KYPRFGKRGAPQAFPSKLYEILEGENPDIVGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSESGSYQHPHFRRGERTTLLTIRRSTKASPAR 159 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1778.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1778.4.1 >prot_P-wetherbeei_contig1778.4.1 ID=prot_P-wetherbeei_contig1778.4.1|Name=mRNA_P-wetherbeei_contig1778.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp MDAMPPTMASIANQQGKYPRFGKRGAPQAFAQKLFEILSNEDQEVVCWTAback to top mRNA from alignment at P-wetherbeei_contig1778:6171..6584+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1778.4.1 ID=mRNA_P-wetherbeei_contig1778.4.1|Name=mRNA_P-wetherbeei_contig1778.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig1778:6171..6584+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1778:6171..6584+ >mRNA_P-wetherbeei_contig1778.4.1 ID=mRNA_P-wetherbeei_contig1778.4.1|Name=mRNA_P-wetherbeei_contig1778.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig1778:6171..6584+ (Phaeothamnion wetherbeei SAG_119_79)back to top |