mRNA_P-wetherbeei_contig17775.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: D7G9E2_ECTSI (Possible vitamin K epoxide reductase, plastid protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E2_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 7.900e-22 Identity = 55/110 (50.00%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 4 SASMRQVLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPALGQGSSDAETDRSTRSWILGVTTAMATFSVYLMSLLALRIGAGCPWCFTSALLSWTMCTVAWAKQAVPQRS 333
S VL+G Y V GVPL+ + Y A A LA+ P + S A D++TRS +L VTTAM FS+YL+SLL +IG CPWC TSA LS +MC VAW K+AVP+++
Sbjct: 60 SGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEES-ASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCVVAWMKRAVPEKT 168
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: A0A6H5K243_9PHAE (VKc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K243_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 2.110e-21 Identity = 55/110 (50.00%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 4 SASMRQVLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPALGQGSSDAETDRSTRSWILGVTTAMATFSVYLMSLLALRIGAGCPWCFTSALLSWTMCTVAWAKQAVPQRS 333
S VL+G Y V GVPL+ + Y A A LA+ P + S A D++TRS +L VTTAM FS+YL+SLL +IG CPWC TSA LS +MC VAW K+AVP+++
Sbjct: 149 SGGCLDVLNGPYSNVLGVPLSAFGTLGYLAAAGLAVVPLFAKEES-ASVDKTTRSLLLVVTTAMGVFSLYLLSLLKFKIGYPCPWCLTSAGLSLSMCIVAWTKRAVPEKT 257
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: A0A4D9D107_9STRA (VKc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D107_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 7.430e-21 Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 1
Query: 22 VLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPALG--QGSSD-AETDRSTRSWILGVTTAMATFSVYLMSLLALRIGAGCPWCFTSALLSWTMCTVAWAKQAVPQRSVNLVF 348
VL+ Y GVPLT+P +AY VA LALWP L +GS + AE D ++R+ +L VTT MATFS YLM +LA ++ CP+C SA LS++M + W KQ P + +LV+
Sbjct: 6 VLNSEYASFLGVPLTLPGAVAYGTVAALALWPILAGKEGSRERAEADLNSRAPLLTVTTGMATFSAYLMWVLATQVRELCPYCLASASLSFSMAALTWVKQVEPNATKSLVY 117
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: W7TFV8_9STRA (Vitamin K epoxide reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFV8_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 7.360e-20 Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = 1
Query: 10 SMR--QVLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPALG--QGSSD-AETDRSTRSWILGVTTAMATFSVYLMSLLALRIGAGCPWCFTSALLSWTMCTVAWAKQAVPQRSVNLVF 348
SMR VL+ Y GVPLT+P +AY V LALWP L +GS + AE D ++R+ +L VTT MATFS YLM +LA ++ CP+C SA LS++M + W KQ P + +LV+
Sbjct: 137 SMRCGDVLNSEYASFLGVPLTLPGAVAYGTVTALALWPILAGNEGSRERAEADLNSRAPLLTVTTGMATFSAYLMWVLATQVRELCPYCLASASLSFSMAALTWVKQVEPNATKSLVY 254
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: A0A7S2RXM7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXM7_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.540e-17 Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 10 SMRQVLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPALGQGSSDAETDRSTRSWILGVTTAMATFSVYLMSLLALRIGAGCPWCFTSALLSWTMCTVAWAKQAV 321
S +VL+G + VFGVPLTVP + AY+ A+LAL P L + T +T+ ++ VT+AMATFS YLM +L L++G+ CPWCF SA LS + T W + V
Sbjct: 131 SCSEVLNGPWSSVFGVPLTVPGMAAYATAALLALAP-LVVSRGNMPTRIATQKGLIAVTSAMATFSTYLMLVLFLKLGSWCPWCFFSACLSTLLATFTWFRTGV 233
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: A0A0G4EVC6_VITBC (VKc domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EVC6_VITBC) HSP 1 Score: 82.4 bits (202), Expect = 5.100e-16 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 1 PSASMRQVLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPALGQGSSDAETDRSTRSWILGVTTAMATFSVYLMSLLALRIGAGCPWCFTSALLSWTMCTVAWAKQAVP 324
P+ VL G Y VFG+PLT PA++AY V L+L P S ++ TR +L +TTAMATFSVYLMS+L ++ CP+C+ SA LS T+ ++W VP
Sbjct: 124 PTGGCYTVLGGPYSTVFGIPLTAPAMLAYGLVTYLSLLPL-----SKPSAEQWTRPMLLALTTAMATFSVYLMSVLVFQLQEFCPYCYLSAGLSLTLFLMSWLWSIVP 226
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: A0A7S2K3D4_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3D4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.280e-10 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 22 VLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPALGQGSSDAET-----DRSTRSWILGVTTAMATFSVYLMSLLALRIGAGCPWCFTSALLSWTMCTVAW 306
VLS Y + G+PLT AY+ VA+L++ P L + +D+ + D R +L ++T MATFS +LMSLL L + CP+C SA+LS + TV W
Sbjct: 122 VLSSPYANIAGIPLTAFGFAAYTTVAILSILPLLNKEENDSSSTAGGDDSFNRLALLTISTGMATFSAFLMSLLLLVLKEMCPYCILSAVLSLGLGTVTW 221
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: A0A6M0C4Z5_9CYAN (Vitamin K epoxide reductase family protein n=1 Tax=Okeania sp. SIO2H7 TaxID=2607802 RepID=A0A6M0C4Z5_9CYAN) HSP 1 Score: 66.2 bits (160), Expect = 1.890e-10 Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 1 PSASMRQVLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPALGQ--GSSDAETDRSTRSWIL--GVTTAMATFSVYLMSLLALRIGAGCPWCFTSALLSWTM 291
P+ ++VL Y VFGVPLT+ IAY++V V+A P L Q + + +SW+L +TT M S YLMS++A +I A CP+C SA+LS ++
Sbjct: 46 PTQGCKEVLESPYAMVFGVPLTLFGFIAYTSVTVIAFTPILLQLKNNKSLRSQLEDKSWLLLLVITTTMVVSSGYLMSIMAWKIEAFCPYCIISAILSLSL 146
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: UPI001A057900 (Vitamin K epoxide reductase family protein n=1 Tax=Synechococcales cyanobacterium T60_A2020_003 TaxID=2774349 RepID=UPI001A057900) HSP 1 Score: 65.5 bits (158), Expect = 3.470e-10 Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 1 PSASMRQVLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPAL--GQGSSDAETDRSTRSWILGV--TTAMATFSVYLMSLLALRIGAGCPWCFTSALLSWTM 291
P+ S QVLS Y +VFG+PLT+ + Y+++ ++A+ P L + D T +W+L TAMATFS YLM +LA ++ A CP+C SA S +M
Sbjct: 46 PTKSCDQVLSSPYAEVFGLPLTLFGFLGYASMGIMAIAPLLINPETQKDLRYKVETWTWLLLFLGATAMATFSGYLMYVLAFKLQAACPYCIASATFSLSM 146
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Match: A0A836CDR7_9STRA (VKc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDR7_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 9.670e-10 Identity = 41/80 (51.25%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 82 AYSAVAVLALWPAL------GQGSSDAET---------DRSTRSWILGVTTAMATFSVYLMSLLALRIGAGCPWCFTSAL 276
AY AVA LAL P L + +DA+ D TRSW+L +TTAMATFS YLM +LA RIGA CP+CF S L
Sbjct: 3 AYGAVAALALVPLLLSSRAAREAGADAQALAMQRAAGVDGWTRSWLLVITTAMATFSAYLMGVLAFRIGAFCPYCFLSLL 82 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17775.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17775.1.1 >prot_P-wetherbeei_contig17775.1.1 ID=prot_P-wetherbeei_contig17775.1.1|Name=mRNA_P-wetherbeei_contig17775.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp MRQVLSGLYLQVFGVPLTVPAVIAYSAVAVLALWPALGQGSSDAETDRSTback to top mRNA from alignment at P-wetherbeei_contig17775:648..1375- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17775.1.1 ID=mRNA_P-wetherbeei_contig17775.1.1|Name=mRNA_P-wetherbeei_contig17775.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=728bp|location=Sequence derived from alignment at P-wetherbeei_contig17775:648..1375- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17775:648..1375- >mRNA_P-wetherbeei_contig17775.1.1 ID=mRNA_P-wetherbeei_contig17775.1.1|Name=mRNA_P-wetherbeei_contig17775.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig17775:648..1375- (Phaeothamnion wetherbeei SAG_119_79)back to top |