mRNA_P-wetherbeei_contig1777.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: A0A6H5JCZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ4_9PHAE) HSP 1 Score: 204 bits (520), Expect = 4.600e-55 Identity = 117/269 (43.49%), Postives = 163/269 (60.59%), Query Frame = 3
Query: 393 IDTSNIDFFVENQSTCTREAMQNVVAEVRALQERRL------------ANPSRAHHFTLISNEYHLSRIGDVHRLSPRRSLLSPVQDLGATWSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSPRCPLKLHTTKLDLKELAAAGKLDP---------------SVAGSPVLVDEALETAAAALSRVQDVVQPAALRRDTVSINDWKAAAKLLDRAILPAQWAVDPDRPL 1118
+DT NI VE++STCT+EA+ NVV EV ++ L A P + +HFTLISNEYHLSRI VH++S SLL+P++ L A+W +E YPY+ S D+ +FQA +Y +E+LVPL VN+Q +A REEFFQ ENY SLV VR RL E I +++S R P D+++ A G+ A + + +AL AA AL+++Q++++PAA RR++VS+ W A LL+RAIL Q + DPDRPL
Sbjct: 18 VDTENIGILVESESTCTKEALDNVVKEVSRMEREELHEREREGEGRSAAWPRQKYHFTLISNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQADVYKTLEDLVPLQVNVQAVANREEFFQEENYTSLVHVRERLKEFIRKMNSSRRPRAKAANLADVRKGADRGRRGXXXXXXXKSDTLRERNECANNEKTLRKALVWAAGALAKIQEIIEPAATRRNSVSLRGWAMCAALLERAILQVQMSADPDRPL 286
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: D7FW21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW21_ECTSI) HSP 1 Score: 197 bits (502), Expect = 2.210e-51 Identity = 115/254 (45.28%), Postives = 156/254 (61.42%), Query Frame = 3
Query: 393 IDTSNIDFFVENQSTCTREAMQNVVAEVRALQERRL------------ANPSRAHHFTLISNEYHLSRIGDVHRLSPRRSLLSPVQDLGATWSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSPRCPLKLHTTKLDLKELAAAGKLDPSVAGSPVLVDEALETAAAALSRVQDVVQPAALRRDTVSINDWKAAAKLLDRAILPAQWAVDPDRPL 1118
+ T NI VE++STCT+EA+ NVV EV ++ L A P + +HFTLISNEYHLSRI VH++S SLL+P++ L A+W +E YPY+ S D+ +FQA +Y +E+LVPL VN+Q +A REEFFQ ENY SLV VR RL E I +++ R + E A K + EAL AA AL+++Q++++PAA RR++VS+ W A LL+RAIL AQ + DPDRPL
Sbjct: 439 VGTENIGILVESESTCTKEALDNVVKEVSRMEREELHEREREGEGRSAAWPRQKYHFTLISNEYHLSRIITVHQISETVSLLAPLKLLEASWGYEQVPYPYACSNDDAKEFQANVYKTLEDLVPLQVNVQAVANREEFFQEENYASLVHVRERLKEFIRRMNPSR----------ERNERADNDKA----------LREALVWAAGALAKIQEIIEPAAARRNSVSLRGWAMCAALLERAILQAQMSADPDRPL 672
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: A0A7S3V5C3_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5C3_9STRA) HSP 1 Score: 139 bits (351), Expect = 8.980e-32 Identity = 97/315 (30.79%), Postives = 147/315 (46.67%), Query Frame = 3
Query: 387 QGIDTSNIDFFVENQSTCTREAMQNVVAEVRALQERRLANPSRAH----------HFTLISNEYHLSRIGDVHRLSPRRSLLSPVQDLG-------------------------------------------------------------ATWSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSPRCPLKLHTTKLDLKELAAAGKLDPSVAGSPVLVDEALETAAAALSRVQDVVQPAALRRDTVSINDWKAAAKLLDRAILPAQWAVDPDRPL 1118
QGID + ++ ++N+S EA+ +V E+++ + + S HFTLIS EYHL I DVH SP RSLL+ ++++G +WSF+YA+YPY +++ + F + ++L EEL+PLLVN++G+ + EFFQ +NY L ++RR L EHI LH P H+TK +K K V G+ V LE A +L R D+V+PA L +V+ +DWK A + L+ ++ + DPDRPL
Sbjct: 378 QGIDLNGVEICIDNKSRSDDEAINSVTEEIKSTYIPKWLSRSPTTTDTMQKSIDMHFTLISTEYHLCNINDVHHRSPERSLLNAMENIGDSFTGNRNYSVQQKANAGRSSNDFFIYYDDDENGSFGDANISSGEQGVLKSNHPAVRGLVKTSWSFQYATYPYIYAKSDSTVFLGKCFLLGEELMPLLVNMKGVVEQREFFQRDNYLMLASIRRSLVEHIEALHKPS-----HSTKKAMKNELRRIK---DVHGNERDVIRILEGALLSLGRCCDMVKPAGLHVGSVTKDDWKRALRSLEHSMSEIRTYCDPDRPL 684
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: A0A7S1TXW1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXW1_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.200e-31 Identity = 100/249 (40.16%), Postives = 141/249 (56.63%), Query Frame = 3
Query: 390 GIDTSNIDFFVENQSTCTREAMQNVVAEVRALQERRLANPSRAHHFTLISNEYHLSRIGDVHRLSPRRSLLSPVQDLGATWSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSP-RCP--LKLH--TTKLDLKELAAAGKLDPSVAGSPVLVDEALETAAAALSRVQDVVQPAALRRDTVSINDWKAAAKLLDRAILPAQWAVDPDRPLR 1121
G+D S+ +E +S +REA+ VVAEV R P + H+TLIS H+ RI VH S S+L +++ G ++S AS P+ S DE + F A L +++EELVP+ VN QG AA +F + EN LV ++ LNE IA L P + P + H T+K L E AA L G+ + V+E LE+AAA+LSRV+D+VQPA + + D+ AAA +L I + DPDRPL+
Sbjct: 296 GVDISHGHVLLEEESHVSREALDLVVAEVSEAAVRAGQLPGQTVHYTLISTTQHVRRIEYVHEHSHPSSMLRSIEEAGGSFSLLKASNPFLSSPDESLSFLAHLMLVVEELVPIRVNFQGAAAGVDFIRRENLSKLVTAKQSLNELIADLGDPIKLPHAQRYHNPTSKNPLFESAARKLLLGD--GTALNVEEELESAAASLSRVKDMVQPA--KNFQSHMVDFAAAADVLGEVIDRLRLVFDPDRPLQ 540
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: A0A7S4VBZ0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VBZ0_9STRA) HSP 1 Score: 127 bits (319), Expect = 7.990e-28 Identity = 103/362 (28.45%), Postives = 146/362 (40.33%), Query Frame = 3
Query: 387 QGIDTSNIDFFVENQSTCTREAMQNVVAEVRALQ--------------------ERRLANPSRAHHFTLISNEYHLSRIGDVHRLSPRRSLLSPVQDL--GAT---------------------------------------------------------------------------------------------WSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSPRCPLKLHTTKLDL---KELAAAGKLDPSVAGSPVLVDEALETAAAALSRVQDVVQPAALRRDTVSINDWKAAAKLLDRAILPAQWAVDPDRPL 1118
Q ID S +D F+++QS AMQ + EVR+ ER HFTL+S EYHL + DVH SPR+S L +Q L G T WSF+YA+YPY ++RDE V F + ++L EEL PLLVN++G+ ++EFFQ +NY L ++RR HI +LH PR L+ K K+ + +D ++ VD LE+A +L R D+V+PA L ++VS DW+ A L+ ++ + DPDRPL
Sbjct: 170 QSIDLSGVDVFIDSQSKSEARAMQRIADEVRSKYVPKWLDLSSVFESRKDEYGLERSAPRKKVNLHFTLVSTEYHLCNMNDVHHRSPRQSALKSLQGLEDGLTIPSFSRRSSSSQDGYSPWSPHSGNGYSVGGRVYGNAYGSVGSYSDYEXXXXXXXXXXXYSSFSSGGWQGEDALSSNANESPMNSSVRGIVETSWSFQYATYPYVYARDEAVSFLGKCFLLGEELYPLLVNMKGVVEKKEFFQRDNYLMLASIRRSFVGHIEELHKPRRTLRNSLRKFSYHMNKQQIESYGVDNNIRDDRS-VDIVLESALLSLGRCVDLVKPAGLLVNSVSKADWERALHALEHSMREIREVCDPDRPL 530
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: A0A6V2HMV2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HMV2_9STRA) HSP 1 Score: 127 bits (319), Expect = 9.720e-28 Identity = 103/362 (28.45%), Postives = 146/362 (40.33%), Query Frame = 3
Query: 387 QGIDTSNIDFFVENQSTCTREAMQNVVAEVRALQ--------------------ERRLANPSRAHHFTLISNEYHLSRIGDVHRLSPRRSLLSPVQDL--GAT---------------------------------------------------------------------------------------------WSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSPRCPLKLHTTKLDL---KELAAAGKLDPSVAGSPVLVDEALETAAAALSRVQDVVQPAALRRDTVSINDWKAAAKLLDRAILPAQWAVDPDRPL 1118
Q ID S +D F+++QS AMQ + EVR+ ER HFTL+S EYHL + DVH SPR+S L +Q L G T WSF+YA+YPY ++RDE V F + ++L EEL PLLVN++G+ ++EFFQ +NY L ++RR HI +LH PR L+ K K+ + +D ++ VD LE+A +L R D+V+PA L ++VS DW+ A L+ ++ + DPDRPL
Sbjct: 206 QSIDLSGVDVFIDSQSKSEARAMQRIADEVRSKYVPKWLDLSSVFESRKDEYGLERSAPRKKVNLHFTLVSTEYHLCNMNDVHHRSPRQSALKSLQGLEDGLTIPSFSRRSSSSQDGYSPWSPHSGNGYSVGGRVYGNAYGSVGSYSDYEXXXXXXXXXXXYSSFSSGGWQGEDALSSNANESPMNSSVRGIVETSWSFQYATYPYVYARDEAVSFLGKCFLLGEELYPLLVNMKGVVEKKEFFQRDNYLMLASIRRSFVGHIEELHKPRRTLRNSLRKFSYHMNKQQIESYGVDNNIRDDRS-VDIVLESALLSLGRCVDLVKPAGLLVNSVSKADWERALHALEHSMREIREVCDPDRPL 566
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: A0A7R9U259_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U259_9STRA) HSP 1 Score: 117 bits (294), Expect = 7.770e-25 Identity = 76/251 (30.28%), Postives = 136/251 (54.18%), Query Frame = 3
Query: 390 GIDTSNIDFFVENQSTCTREAMQNVVAEVRALQERRLANPSRAHHFTLISNEYHLSRIGDVHRLSPRRSLLSPVQDLGATWSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSP-RCP----LKLHTTKLDLKELAAAGKLDPSVAGS-PVLVDEALETAAAALSRVQDVVQPAALRRDTVSI-NDWKAAAKLLDRAILPAQWAVDPDRPLR 1121
G+D ++ +E +S +R+A+ +V E+ P H+TLIS +HL R+ VH S R S+L ++D G T++F +SYPY S DE ++F A + +++EELVP+LVNL+ E+F +N L L E + L+ P + P + + + AA KL ++G+ +L+ E LE A +++++V+++++ A ++ + +D A +LL + + + +DPDRPL+
Sbjct: 234 GVDITSSQLLLEEESEFSRDAIDLIVPEIAEAAAEGGVLPGETLHYTLISTTHHLRRLAHVHVNSARSSMLKKIEDAGGTYTFLKSSYPYLASPDEGLRFLANIILVVEELVPVLVNLEAATTGSEWFNRDNLRILTEACHSLRELVQSLNDPTKQPHPERFRERSPRNPFYSSAARKKL---LSGAYALLLGEELEDAVSSITKVKNLIESAVYGKEYSGMRSDLDTATRLLGQTVAAMRGVLDPDRPLQ 481
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: A0A7S4M5J4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M5J4_9STRA) HSP 1 Score: 112 bits (281), Expect = 6.420e-23 Identity = 85/284 (29.93%), Postives = 123/284 (43.31%), Query Frame = 3
Query: 522 HFTLISNEYHLSRIGDVHRLSPRRSLLSPVQ-------------------------------DLGAT-----------------------------------------------------WSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSPRCPLKLHTTKLDLKELAAAGKLDPSVAGSPVLVDEALETAAAALSRVQDVVQPAALRRDTVSINDWKAAAKLLDRAILPAQWAVDPDRPLR 1121
HF+L+S EYHL + DVH SPR+SLL ++ D G T WSF+YA+YP+ +++DE V F + ++L EEL PLL N++G+ ++EFFQ +NY L ++RR L H+ +LHS R LK L+E ++ G+ D V LE A +L R DVV+PA L +VS ++W A L ++ + + DPDRPLR
Sbjct: 230 HFSLVSTEYHLCNLNDVHHRSPRQSLLKSIERLKEAGTSDSPPVPGPYGRMMDDSSVSVEWDDEGNTYIRDDQRWDDDDIFVDDEYGDMLEERPYRRTFPSRGDKPKPPPPTISVVVETSWSFQYATYPFLYAKDEAVVFLGKCFLLGEELTPLLANMKGVVDQKEFFQRDNYLMLASIRRSLVSHVERLHSKRTSLKTA-----LREYSS-GRRD---------VTAVLEGALLSLGRCVDVVRPAGLLVSSVSKSEWTRALGQLRHSMEEIRRSCDPDRPLR 498
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: A0A1Z5KLQ0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLQ0_FISSO) HSP 1 Score: 107 bits (268), Expect = 1.410e-21 Identity = 66/205 (32.20%), Postives = 112/205 (54.63%), Query Frame = 3
Query: 528 TLISNEYHLSRIGDVHRLSPRRSLLSPVQDLG--------ATWSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSPRCPLKLHTTKLDLKELAAAGKLDPSVAGSPVLVDEALETAAAALSRVQDVVQPAALRRDTVSINDWKAAAKLLDRAILPAQWAVDPDRPL 1118
+L+S++YH+ +I DV + SPR+S L + + WSF Y + S+D+ F + Y+ ++L P+++NL+G+A EFFQ ENY SLV+ RR L + ++++ + LK + + + ++D + + VD LE+A +L R D+V+PA L +V+ DWK A +L++A+ DPD PL
Sbjct: 232 SLVSSDYHICQIHDVQQRSPRQSALRALNTVTKPSNTTVETKWSFMYTTTAPILSKDKVQGFFYKCYITAQQLYPVVINLRGVANNREFFQRENYLSLVSARRSLVTDMERIYNVQPSLK----SVHHLSIYSGNRVDETQTETKKPVDVVLESALLSLGRCCDLVRPAGLLTGSVTSADWKLAYSILEQAVDQILITCDPDEPL 432
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Match: B8C0Y5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0Y5_THAPS) HSP 1 Score: 106 bits (264), Expect = 1.240e-20 Identity = 87/313 (27.80%), Postives = 133/313 (42.49%), Query Frame = 3
Query: 393 IDTSNIDFFVENQSTCTREAMQNVVAEVRA------LQERRLANPSRAH--------------HFTLISNEYHLSRIGDVHRLSPRRSLLSPVQDL--------------------------------------------------GATWSFEYASYPYSFSRDEEVQFQAQLYVLMEELVPLLVNLQGLAAREEFFQNENYESLVAVRRRLNEHIAQLHSPRCPLKLHTTKLD-LKELAAAGKLDPSVAGSPVLVDEALETAAAALSRVQDVVQPAALRRDTVSINDWKAAAKLLDRAILPAQWAVDPDRPL 1118
ID +++ +S REAM+ + +E+ L ER L H HFTL+S EYHL + DVH SP +S L P+ L +WSF+Y +YP+ +DE + F Q Y+L EEL PLLVN++G+ + EFFQ +NY L ++RR L + L++ K + + +K + G+ + ++V ALE+A L R D+V+PA L +V W A L++++ DPD+PL
Sbjct: 380 IDELQTRMWIDTKSKNEREAMERIASELWRNHIKLWLGERPLTERLNQHYGVGWTILERKVDIHFTLVSTEYHLCNLNDVHHRSPVKSFLQPLVSLRGLVGSDRWVNSHELEAMDPSYSSSVHVRGSNTSPVVPERSTFGGIENSVDTSWSFQYGTYPFLHGKDESIVFLGQCYLLGEELTPLLVNMKGVVEQTEFFQRDNYLLLSSIRRSLVSLVEALYTE----KGQSIRAGVIKYFESQGRNRFTKEDVKIIV--ALESALLNLGRCIDLVKPAGLLVSSVPAPTWSRALDALEKSMHHIHLVCDPDQPL 686 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1777.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1777.1.1 >prot_P-wetherbeei_contig1777.1.1 ID=prot_P-wetherbeei_contig1777.1.1|Name=mRNA_P-wetherbeei_contig1777.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp MQNVVAEVRALQERRLANPSRAHHFTLISNEYHLSRIGDVHRLSPRRSLLback to top mRNA from alignment at P-wetherbeei_contig1777:60..2490- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1777.1.1 ID=mRNA_P-wetherbeei_contig1777.1.1|Name=mRNA_P-wetherbeei_contig1777.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2431bp|location=Sequence derived from alignment at P-wetherbeei_contig1777:60..2490- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1777:60..2490- >mRNA_P-wetherbeei_contig1777.1.1 ID=mRNA_P-wetherbeei_contig1777.1.1|Name=mRNA_P-wetherbeei_contig1777.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig1777:60..2490- (Phaeothamnion wetherbeei SAG_119_79)back to top |