mRNA_P-wetherbeei_contig17721.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17721.1.1
Unique NamemRNA_P-wetherbeei_contig17721.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: A0A835Z1U5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1U5_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.130e-18
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 1 
Query:    1 DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            DDEGHY G +G +L   YEV+ DVG GTFGRVV C+DR  RR VAVK+VR +++Y+ESALIE
Sbjct:  171 DDEGHYEGQSGSVLGDGYEVQEDVGTGTFGRVVACWDRRGRRTVAVKVVRRVKRYHESALIE 232
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: A0A7S1BPD7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPD7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 5.210e-17
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 1 
Query:    1 DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            D  GH+RGG G L+  RYEV RDVG+GTFGRVV+C DR     VA+KIVR + +Y+ESA IE
Sbjct:   22 DTVGHFRGGLGSLVTERYEVLRDVGMGTFGRVVECVDRRYDDTVAIKIVRDVRRYHESAKIE 83
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: A0A7S1BLV6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLV6_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.070e-16
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 1 
Query:    1 DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            D  GH+RGG G L+  RYEV RDVG+GTFGRVV+C DR     VA+KIVR + +Y+ESA IE
Sbjct:   22 DTVGHFRGGLGSLVTERYEVLRDVGMGTFGRVVECVDRRYDDTVAIKIVRDVRRYHESAKIE 83
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: A0A4D9CUL9_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUL9_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.390e-15
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 1 
Query:    1 DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            D  GHY G  G ++  RYEV  DVG+GTFGRVVQC DR   R VAVK+VRSI +Y ESAL+E
Sbjct:  377 DRVGHYEGREGDMIRGRYEVLGDVGMGTFGRVVQCLDRKRGREVAVKVVRSIPRYTESALVE 438
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: A0A6H5L2A1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.880e-14
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1 
Query:    4 DEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            DEGHY+G  G  L  RYE+  DVG+GTFGRVV+C+     R VAVK+VR + KY+ESALIE
Sbjct:  406 DEGHYKGKKGDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRRVAVKVVRKVAKYHESALIE 466
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: A0A2P2LIX1_RHIMU (Uncharacterized protein MANES_12G020700 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LIX1_RHIMU)

HSP 1 Score: 70.9 bits (172), Expect = 7.660e-14
Identity = 30/62 (48.39%), Postives = 46/62 (74.19%), Query Frame = 1 
Query:    1 DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            D +GHY    G  L  RY+++R +G GTFG+V++C+DR  R  VA+K+V+SI+KY E+A++E
Sbjct:   81 DKDGHYMFALGDNLTSRYKIQRKIGEGTFGQVLECWDRETREMVAIKVVQSIKKYREAAMLE 142
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: A0A5B7CED8_DAVIN (Protein kinase domain-containing protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7CED8_DAVIN)

HSP 1 Score: 69.7 bits (169), Expect = 1.750e-13
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 1 
Query:    1 DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            D +GHY    G  L  RY++ R +G GTFG+V++C+DR  +  VA+K+VRSI+KY E+A+IE
Sbjct:   79 DKDGHYMFELGENLTSRYKILRKIGEGTFGQVLECWDREAKEMVAIKVVRSIKKYREAAMIE 140
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: UPI0010AAECC9 (serine/threonine-protein kinase AFC2-like isoform X2 n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010AAECC9)

HSP 1 Score: 72.0 bits (175), Expect = 2.020e-13
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 1 
Query:    1 DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            D +GHY    G  L  RY++ R +G GTFG+V++C+DR  +  VA+K+VRSI+KY E+A+IE
Sbjct:   80 DKDGHYMFALGENLTSRYKIHRKIGEGTFGQVLECWDRETKEMVAIKVVRSIKKYREAAMIE 141
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: A0A1D6ELZ8_MAIZE (Serine/threonine-protein kinase AFC2 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6ELZ8_MAIZE)

HSP 1 Score: 69.3 bits (168), Expect = 2.420e-13
Identity = 30/62 (48.39%), Postives = 45/62 (72.58%), Query Frame = 1 
Query:    1 DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            D +GHY    G  L  RY++ R +G GTFG+V++C+DR  +  VA+KIVRS++KY ++A+IE
Sbjct:   80 DKDGHYVFAVGENLASRYKIYRKMGEGTFGQVLECWDRESKEMVAIKIVRSVKKYSDAAMIE 141
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BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Match: A0A7J7BXX0_TRIWF (Serine/threonine-protein kinase AFC2-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7BXX0_TRIWF)

HSP 1 Score: 69.7 bits (169), Expect = 2.510e-13
Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 1 
Query:    1 DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVRSIEKYYESALIE 186
            D +GHY    G  L  RY++ R +G GTFG+V++C+DR  R  VA+K+VRSI KY ++A++E
Sbjct:   80 DKDGHYVFALGENLTSRYKIHRKIGEGTFGQVLECWDRETRELVAIKVVRSIRKYRKAAMVE 141
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17721.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1U5_9STRA2.130e-1864.52Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S1BPD7_9STRA5.210e-1761.29Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1BLV6_9STRA2.070e-1661.29Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A4D9CUL9_9STRA5.390e-1562.90Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A6H5L2A1_9PHAE1.880e-1460.66Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A2P2LIX1_RHIMU7.660e-1448.39Uncharacterized protein MANES_12G020700 n=1 Tax=Rh... [more]
A0A5B7CED8_DAVIN1.750e-1350.00Protein kinase domain-containing protein n=1 Tax=D... [more]
UPI0010AAECC92.020e-1350.00serine/threonine-protein kinase AFC2-like isoform ... [more]
A0A1D6ELZ8_MAIZE2.420e-1348.39Serine/threonine-protein kinase AFC2 n=1 Tax=Zea m... [more]
A0A7J7BXX0_TRIWF2.510e-1348.39Serine/threonine-protein kinase AFC2-like n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17721contigP-wetherbeei_contig17721:1..186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog57918.XP_004309989.1
PFAMsPkinase
Model size186
Max annot lvl35493|Streptophyta
KEGG koko:K08287
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0034641,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046483,GO:0046777,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564
Exons1
Evalue7.36e-15
EggNOG OGsKOG0667@1|root,KOG0671@2759|Eukaryota,37QUV@33090|Viridiplantae,3GER1@35493|Streptophyta,4JKF1@91835|fabids
EC2.7.12.1
DescriptionSerine threonine-protein kinase AFC2-like
Cds size186
COG categoryT
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186124.86079-CDS-P-wetherbeei_contig17721:0..1861683186124.86079-CDS-P-wetherbeei_contig17721:0..186Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17721 1..186 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17721.1.1prot_P-wetherbeei_contig17721.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17721 1..186 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17721.1.1

>prot_P-wetherbeei_contig17721.1.1 ID=prot_P-wetherbeei_contig17721.1.1|Name=mRNA_P-wetherbeei_contig17721.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=62bp
DDEGHYRGGAGRLLVRRYEVERDVGVGTFGRVVQCYDRHDRRPVAVKIVR
SIEKYYESALIE
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mRNA from alignment at P-wetherbeei_contig17721:1..186-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17721.1.1 ID=mRNA_P-wetherbeei_contig17721.1.1|Name=mRNA_P-wetherbeei_contig17721.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=186bp|location=Sequence derived from alignment at P-wetherbeei_contig17721:1..186- (Phaeothamnion wetherbeei SAG_119_79)
GACGACGAAGGCCACTACCGCGGCGGCGCCGGCCGCCTGTTGGTGCGCCG
CTACGAGGTGGAGCGCGACGTCGGCGTCGGGACGTTCGGGCGCGTCGTTC
AGTGCTACGACCGCCACGACCGCCGCCCGGTCGCCGTCAAGATCGTCCGA
TCCATCGAGAAGTACTATGAGTCGGCGCTCATCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17721:1..186-

>mRNA_P-wetherbeei_contig17721.1.1 ID=mRNA_P-wetherbeei_contig17721.1.1|Name=mRNA_P-wetherbeei_contig17721.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=186bp|location=Sequence derived from alignment at P-wetherbeei_contig17721:1..186- (Phaeothamnion wetherbeei SAG_119_79)
GACGACGAAGGCCACTACCGCGGCGGCGCCGGCCGCCTGTTGGTGCGCCG
CTACGAGGTGGAGCGCGACGTCGGCGTCGGGACGTTCGGGCGCGTCGTTC
AGTGCTACGACCGCCACGACCGCCGCCCGGTCGCCGTCAAGATCGTCCGA
TCCATCGAGAAGTACTATGAGTCGGCGCTCATCGAG
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