mRNA_P-wetherbeei_contig17709.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17709.1.1
Unique NamemRNA_P-wetherbeei_contig17709.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17709.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17709contigP-wetherbeei_contig17709:91..1218 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1121396.KB893072_gene1254
PFAMsNB-ARC,Peptidase_C14,TIR_2,TPR_10,TPR_12,TPR_7,TPR_8
Model size1128
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue0.000381
EggNOG OGsCOG0457@1|root,COG3903@1|root,COG0457@2|Bacteria,COG3903@2|Bacteria
DescriptionADP binding
Cds size1128
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186124.4750354-CDS-P-wetherbeei_contig17709:90..12181683186124.4750354-CDS-P-wetherbeei_contig17709:90..1218Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17709 91..1218 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17709.1.1prot_P-wetherbeei_contig17709.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17709 91..1218 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17709.1.1

>prot_P-wetherbeei_contig17709.1.1 ID=prot_P-wetherbeei_contig17709.1.1|Name=mRNA_P-wetherbeei_contig17709.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=376bp
EAEARFAAAASQVDGEADGLAAVASVNLGLADSRRKQHRWAPALDALTKA
LLPLRKTAAPQDPQLATVLHQLGALIAYTGKASDAEPALMECLNVSRKVV
NPRQLSAYLCVLADFYLFHRAFQRAAGHLQEAAGILIQNFGPADPQGCHV
QLAMGDVWDRIDRVSQAIQLRDALQQSVAGNPALSFEVAYRRALAHKKRR
EWAPCLEILQACLAMTGEQDARRVLIQGEIGNALLGLTRFGEAEGSMVQG
YQLAMGIFGPEHPQTAVCAADLARLWQSQGRIQEAEPGYQFAHSVLFQKL
GEGHPLTLTLCDRLIECCMQRKDFMRAQLLTIETMKDRSRIYGDTHPLVA
ESLSLLGRVWLQQRKFGEAADALTQA
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mRNA from alignment at P-wetherbeei_contig17709:91..1218-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17709.1.1 ID=mRNA_P-wetherbeei_contig17709.1.1|Name=mRNA_P-wetherbeei_contig17709.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1128bp|location=Sequence derived from alignment at P-wetherbeei_contig17709:91..1218- (Phaeothamnion wetherbeei SAG_119_79)
GAGGCGGAGGCGCGCTTTGCTGCGGCCGCCAGTCAAGTTGACGGAGAGGC
CGACGGATTGGCCGCGGTCGCCAGCGTAAATTTGGGGTTGGCCGACTCGC
GTCGCAAACAGCACCGCTGGGCACCTGCCCTCGACGCCCTCACCAAAGCT
TTGCTGCCCCTGCGCAAAACCGCCGCCCCACAGGACCCCCAGCTGGCCAC
CGTGCTCCATCAATTGGGCGCCTTGATCGCATATACCGGCAAAGCTTCGG
ACGCCGAGCCGGCTCTGATGGAGTGTCTCAACGTCAGCCGCAAGGTGGTC
AATCCCCGCCAGCTCAGCGCTTATCTGTGCGTACTGGCCGACTTTTATCT
TTTCCATCGCGCCTTTCAGCGGGCGGCGGGGCACCTCCAGGAAGCCGCTG
GCATTCTCATCCAAAATTTTGGCCCGGCCGATCCTCAGGGATGCCACGTG
CAGCTGGCGATGGGCGACGTGTGGGATCGCATCGATCGGGTTTCTCAGGC
GATTCAGCTCCGCGACGCTCTGCAGCAATCGGTGGCCGGCAACCCGGCGC
TCAGCTTCGAAGTTGCCTATCGACGTGCGCTGGCTCATAAGAAGCGGCGC
GAGTGGGCTCCCTGTCTGGAGATCTTGCAGGCCTGCCTGGCTATGACGGG
GGAGCAGGACGCTCGTCGTGTCCTCATCCAGGGCGAGATCGGCAACGCTC
TCCTGGGCTTGACGCGCTTTGGCGAGGCCGAAGGCTCGATGGTGCAGGGC
TACCAGCTGGCCATGGGGATTTTCGGGCCGGAACATCCGCAAACGGCCGT
ATGCGCCGCCGATCTGGCGCGCCTGTGGCAGAGTCAGGGGCGTATCCAGG
AGGCCGAGCCGGGCTATCAGTTTGCCCATTCGGTGCTCTTCCAGAAGTTG
GGCGAAGGGCACCCGCTCACTTTGACTCTGTGCGATCGCCTCATCGAGTG
CTGCATGCAGCGTAAGGATTTTATGCGGGCTCAGCTTTTGACTATCGAGA
CCATGAAAGATCGCAGCCGGATTTATGGGGATACCCATCCTCTGGTCGCA
GAGAGCCTTTCCCTGCTGGGCCGCGTGTGGCTGCAGCAGCGCAAATTCGG
CGAAGCGGCTGATGCTTTGACGCAGGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17709:91..1218-

>mRNA_P-wetherbeei_contig17709.1.1 ID=mRNA_P-wetherbeei_contig17709.1.1|Name=mRNA_P-wetherbeei_contig17709.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1128bp|location=Sequence derived from alignment at P-wetherbeei_contig17709:91..1218- (Phaeothamnion wetherbeei SAG_119_79)
GAGGCGGAGGCGCGCTTTGCTGCGGCCGCCAGTCAAGTTGACGGAGAGGC
CGACGGATTGGCCGCGGTCGCCAGCGTAAATTTGGGGTTGGCCGACTCGC
GTCGCAAACAGCACCGCTGGGCACCTGCCCTCGACGCCCTCACCAAAGCT
TTGCTGCCCCTGCGCAAAACCGCCGCCCCACAGGACCCCCAGCTGGCCAC
CGTGCTCCATCAATTGGGCGCCTTGATCGCATATACCGGCAAAGCTTCGG
ACGCCGAGCCGGCTCTGATGGAGTGTCTCAACGTCAGCCGCAAGGTGGTC
AATCCCCGCCAGCTCAGCGCTTATCTGTGCGTACTGGCCGACTTTTATCT
TTTCCATCGCGCCTTTCAGCGGGCGGCGGGGCACCTCCAGGAAGCCGCTG
GCATTCTCATCCAAAATTTTGGCCCGGCCGATCCTCAGGGATGCCACGTG
CAGCTGGCGATGGGCGACGTGTGGGATCGCATCGATCGGGTTTCTCAGGC
GATTCAGCTCCGCGACGCTCTGCAGCAATCGGTGGCCGGCAACCCGGCGC
TCAGCTTCGAAGTTGCCTATCGACGTGCGCTGGCTCATAAGAAGCGGCGC
GAGTGGGCTCCCTGTCTGGAGATCTTGCAGGCCTGCCTGGCTATGACGGG
GGAGCAGGACGCTCGTCGTGTCCTCATCCAGGGCGAGATCGGCAACGCTC
TCCTGGGCTTGACGCGCTTTGGCGAGGCCGAAGGCTCGATGGTGCAGGGC
TACCAGCTGGCCATGGGGATTTTCGGGCCGGAACATCCGCAAACGGCCGT
ATGCGCCGCCGATCTGGCGCGCCTGTGGCAGAGTCAGGGGCGTATCCAGG
AGGCCGAGCCGGGCTATCAGTTTGCCCATTCGGTGCTCTTCCAGAAGTTG
GGCGAAGGGCACCCGCTCACTTTGACTCTGTGCGATCGCCTCATCGAGTG
CTGCATGCAGCGTAAGGATTTTATGCGGGCTCAGCTTTTGACTATCGAGA
CCATGAAAGATCGCAGCCGGATTTATGGGGATACCCATCCTCTGGTCGCA
GAGAGCCTTTCCCTGCTGGGCCGCGTGTGGCTGCAGCAGCGCAAATTCGG
CGAAGCGGCTGATGCTTTGACGCAGGCT
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