mRNA_P-wetherbeei_contig17705.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: A0A7S3XUN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUN7_HETAK) HSP 1 Score: 72.4 bits (176), Expect = 5.110e-13 Identity = 35/84 (41.67%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 256 ELEKRLQESLETARLEVRRREEAAREQ-------TLCCICRDRAKSVLLLPCRHLCLCRQCAQHDTLGACPICRVTVMDRIAVY 486
+LE+ L+ LE RR+E+ +EQ TLC +C++RAK+VL+LPCRH+CLC++C+++ +L ACP+CR+ + +I +
Sbjct: 60 DLEQDLKACLEAT---TRRKEKVTKEQLDNAAASTLCVVCQERAKTVLILPCRHMCLCQECSENQSLKACPLCRIEIESKIQAF 140
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: A0A7S2G914_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G914_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.520e-12 Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 1
Query: 145 RRTSDSGLARGWRSGLSRFAQPLTADEAAAADPPTLAELEKRLQESLETARLEVRRREEAA----REQTLCCICRDRAKSVLLLPCRHLCLCRQCAQHDTLGACPICRVTVMDRIAVY 486
R T D+ AR GL + + L ++ P+L LE L+ SL E R +A REQ LC +C++R KS L+LPCRHLCLC+ C++ L +CP+CR + +I VY
Sbjct: 84 RLTEDAARAR----GLEQEVRQLRGEDIKGLSMPSLDALEVTLRTSLGAVGRERERLLQARVMNEREQRLCVVCQEREKSCLILPCRHLCLCKDCSRRSELKSCPLCRKPIEQKIDVY 197
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: A0A482S6W3_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6W3_9ARCH) HSP 1 Score: 69.7 bits (169), Expect = 5.000e-12 Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 304 VRRREEAAREQTLCCICRDRAKSVLLLPCRHLCLCRQCAQHDTLGACPICRVTVMDRIAVY 486
+R + EA +EQ LC IC++ K+V+LLPCRHLCLC C+ H L CP+CR ++ +I+V+
Sbjct: 76 IRSQIEAQKEQRLCVICQENEKTVVLLPCRHLCLCDGCSVHSALDMCPLCREAIVHKISVF 136
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: A0A7S2FB17_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FB17_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 5.600e-11 Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 304 VRRREEAAREQTLCCICRDRAKSVLLLPCRHLCLCRQCAQHDTLGACPICRVTVMDRIAVY 486
++R++E R++ LC +C+D K LL+PCRHLC+C+ C+ H L CP+CR T+ ++ VY
Sbjct: 231 IQRQQERDRDEKLCVVCQDAEKETLLMPCRHLCVCKNCSSHVALDRCPVCRTTIEMKLNVY 291
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: A0A7S3H223_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H223_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 6.990e-11 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 256 ELEKRLQESLETARLE----VRRREEAAREQTLCCICRDRAKSVLLLPCRHLCLCRQCAQHDTLGACPICRVTVMDRIAVY 486
ELEK L+ +LE + +R + +EQ +C +C++ KSV+LLPCRHLC+C C+ HD L CP+CR + +I+V+
Sbjct: 53 ELEKSLKTALERIEAKKAVLIRNQIGNQKEQRVCVVCQEHEKSVVLLPCRHLCVCDVCSTHDLLKMCPLCREPIAHKISVF 133
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: A0A812S5N9_SYMMI (Rnf26 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S5N9_SYMMI) HSP 1 Score: 68.6 bits (166), Expect = 9.810e-11 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 301 EVRRREEAAREQTLCCICRDRAKSVLLLPCRHLCLCRQCAQHDT---LGACPICRVTVMDRIAVY 486
+ +RR+E E LCC+CRD K+VLLLPC+HLCLC C++H + + +CP+CR V D + VY
Sbjct: 188 DAQRRDET--ENALCCVCRDNNKTVLLLPCKHLCLCEVCSEHISTRRMTSCPVCRQAVSDALRVY 250
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: A0A7S3XJT7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJT7_HETAK) HSP 1 Score: 66.6 bits (161), Expect = 1.720e-10 Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 238 DPPTLAELEKRLQESLETARLEVRRREEAAREQ--------TLCCICRDRAKSVLLLPCRHLCLCRQCAQHDTLGACPICRVTVMDRIAVY 486
D T+AE E RL++SL+ RR +E +Q T+C +C++ AKSVL+LPCRHLCLC+ C+++ L CP+CR + +I +
Sbjct: 88 DQMTVAETE-RLEQSLQDYISAARRHKEKLLQQKLDMAEASTVCVVCQEHAKSVLILPCRHLCLCQGCSENQLLRTCPLCRENIESKIQTF 177
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: A0A7S2D6M8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6M8_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.100e-10 Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 304 VRRREEAAREQTLCCICRDRAKSVLLLPCRHLCLCRQCAQHDTLGACPICRVTVMDRIAVY 486
++R+ E R++ LC IC+D K LLLPCRHLC+CR CA H L CP+CR + I Y
Sbjct: 606 LQRKREQERDERLCVICQDAQKQTLLLPCRHLCVCRACAGHTALDKCPVCRAKIESTIDAY 666
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: D7FNM1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM1_ECTSI) HSP 1 Score: 66.2 bits (160), Expect = 2.910e-10 Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 250 LAELEKRLQESLETA---RLEVRRREEAAREQTLCCICRDRAKSVLLLPCRHLCLCRQCAQHDTLGACPICRVTVMDRIAVY 486
L LEK L+++LE R + +++ A EQ LC +C++ +SVLLLPCRHLC+CR C++ L CP+CR + + + VY
Sbjct: 107 LEHLEKDLRKALEGVCGERDRIVQQQLAKEEQRLCVVCQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVY 188
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Match: A0A7S2C4Y0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4Y0_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 4.840e-10 Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 304 VRRREEAAREQTLCCICRDRAKSVLLLPCRHLCLCRQCAQHDTLGACPICRVTVMDRIAVY 486
+R + + R+Q LC IC++ K+ LLLPCRHLCLC++C++ + L CP+CR + +I V+
Sbjct: 119 LREQADTERDQRLCVICQENEKNTLLLPCRHLCLCKECSRREELDKCPLCRKGIDQKIDVF 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17705.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17705.1.1 >prot_P-wetherbeei_contig17705.1.1 ID=prot_P-wetherbeei_contig17705.1.1|Name=mRNA_P-wetherbeei_contig17705.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MEPLGHGGNSGRNGSRWRRHRRRTSDSGLARGWRSGLSRFAQPLTADEAAback to top mRNA from alignment at P-wetherbeei_contig17705:731..1269+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17705.1.1 ID=mRNA_P-wetherbeei_contig17705.1.1|Name=mRNA_P-wetherbeei_contig17705.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=539bp|location=Sequence derived from alignment at P-wetherbeei_contig17705:731..1269+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17705:731..1269+ >mRNA_P-wetherbeei_contig17705.1.1 ID=mRNA_P-wetherbeei_contig17705.1.1|Name=mRNA_P-wetherbeei_contig17705.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig17705:731..1269+ (Phaeothamnion wetherbeei SAG_119_79)back to top |