mRNA_P-wetherbeei_contig1769.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1769.2.1
Unique NamemRNA_P-wetherbeei_contig1769.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: A0A7S4DAK2_HETAK (40S ribosomal protein SA n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAK2_HETAK)

HSP 1 Score: 382 bits (980), Expect = 3.000e-130
Identity = 190/242 (78.51%), Postives = 216/242 (89.26%), Query Frame = 1 
Query:   10 RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEAAVPAFEQEQPTAWAA--EAPMPAP---PVDVYAPEA 720
            ++EDIQKML+ Q HIGTRNS+N+M +YIW RRQDGVH++N+GKTWEK+VLAARIIVAIENP+DV+AISARPYGQRAVLKFAQYTGA SIA RFTPGTFTNQITKQFREPRLL++TDPRTD+QAV+EASYVNVPVIAFCDSDSPLP+VDVA+PANNKGKLSIGL+YWLLAREVLRMRGTI+RD PWDVPVDLFFYRD EELEK +EA   A+E++ P  W A  EA  PA    P+D  AP+A
Sbjct:   37 KEEDIQKMLAGQCHIGTRNSENKMADYIWTRRQDGVHVMNLGKTWEKIVLAARIIVAIENPEDVVAISARPYGQRAVLKFAQYTGANSIAGRFTPGTFTNQITKQFREPRLLVITDPRTDSQAVKEASYVNVPVIAFCDSDSPLPNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTISRDAPWDVPVDLFFYRDPEELEKADEAQAAAYEEQVPAGWGAAPEAAAPAAEMAPMDYVAPDA 278
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BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: A0A8J2SYU6_9STRA (40S ribosomal protein SA n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYU6_9STRA)

HSP 1 Score: 377 bits (969), Expect = 3.300e-128
Identity = 201/278 (72.30%), Postives = 222/278 (79.86%), Query Frame = 1 
Query:   10 RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEAAVPAFEQEQPTAWAAEAPMPAPPVDVYA-PEAAYGAPPPPAAAVG---------NWDAPAASADPMGGDWGA 813
            ++EDIQKML+AQ HIGTRNSD+ M+EYIWRRRQDGVHI+NIGKTWEKL+LAAR++ AIENPQDVIAISARPYGQRAVLKFAQYTGA SIA RFTPGTFTNQITKQFREPR+L++TDPRTD+QAV EASYVN+PVIAFCDSDSPL HVDVA+P+NNKGKLSIGL+YWLLAREVLRMRGT++R  PWDVPVDLFFYRD EELEK EEA   A EQEQ   W A A   AP    Y+ P A  G    PAA  G          WD  A +A      WGA
Sbjct:   82 KEEDIQKMLAAQCHIGTRNSDHMMEEYIWRRRQDGVHIINIGKTWEKLMLAARVLTAIENPQDVIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFREPRILVITDPRTDSQAVAEASYVNLPVIAFCDSDSPLQHVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTVSRLAPWDVPVDLFFYRDPEELEKAEEAQAFAAEQEQAQTWNASAGEAAPKEQPYSDPNAMAGFEQAPAATGGFAAPAAPEQQWDPNAQAAGAAAQQWGA 359
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BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: F0Y9V2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9V2_AURAN)

HSP 1 Score: 367 bits (943), Expect = 2.260e-126
Identity = 175/214 (81.78%), Postives = 199/214 (92.99%), Query Frame = 1 
Query:   10 RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEAAVPAFEQE 651
            ++EDIQKMLSAQ HIGTRNSD+ M+EYIWRRRQDG+HI+N+GKTWEKL+LAAR++ AIENPQD+IAISARPYGQRAVLKFAQYTGA SIA RFTPGTFTNQITKQF+EPR+L++TDPRTD+QAV+EASYVN+PVIAFCDSDSP  HVDVA+P+NNKGKLSIGL+YWLLARE+LRMRGT+AR  PWDVPVDLFFYRD EELEK +EA   A EQE
Sbjct:    5 KEEDIQKMLSAQCHIGTRNSDHMMEEYIWRRRQDGIHIINVGKTWEKLMLAARVLTAIENPQDIIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFKEPRILVITDPRTDSQAVKEASYVNLPVIAFCDSDSPCQHVDVAIPSNNKGKLSIGLLYWLLAREMLRMRGTVARHAPWDVPVDLFFYRDPEELEKADEAQAFAAEQE 218
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BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: D7FHP2_ECTSI (40S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP2_ECTSI)

HSP 1 Score: 370 bits (951), Expect = 1.310e-125
Identity = 202/272 (74.26%), Postives = 218/272 (80.15%), Query Frame = 1 
Query:    1 CKH-RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEAAVPAFEQEQPTA--WAAE------APMPAPPVDVYAPEAA------YGAPPPPAAAVGNWDA 771
            C H ++EDI KML+AQVHIGTRNSD+QM++YIWRRRQDG+HILNIGKTWEKLVLAARIIVAIENPQDV+AISARPYGQRAVLKFAQYTG  SIA RFTPGTFTNQITKQFREPRLLI+TDPR DAQAV+EASYVNVPVIAFCDSDSPL +VDVA+P+NNKGKLSIGL+YWLLAREVLRMRGTI R   WDVPVDLFFYR+ EELEK EEA  P  E     A  W A+      AP P        P AA      Y APP  AA  G WDA
Sbjct:    9 CLHAKEEDIHKMLAAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRTVAWDVPVDLFFYREPEELEKAEEAQAPFQEPAAAAASGWGADPMAGGAAPTPMEGFAAVDPAAAAPVPVEYQAPPQAAAMGGGWDA 280
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BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: A0A836CJ71_9STRA (40S ribosomal protein SA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ71_9STRA)

HSP 1 Score: 367 bits (942), Expect = 9.580e-125
Identity = 178/204 (87.25%), Postives = 194/204 (95.10%), Query Frame = 1 
Query:   10 RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPE 621
            ++EDIQKMLSAQ HIGTRNSD+QMK+YIWRRR DG+HILNIGKTWEKLVLAARII AIENPQDVIAISARPYGQRAVLKFAQYTGA SIA RFTPGTFTNQITKQFREPRLLI+TDPRTDAQAV+E+SYVNVPVIAFCDSDSPL +VDVA+PANNKGKLSIGL+YW+LAREVLR+RGT+ RD PWDVPVDLFF+R+ EELEK E
Sbjct:   13 KEEDIQKMLSAQAHIGTRNSDDQMKDYIWRRRHDGIHILNIGKTWEKLVLAARIIAAIENPQDVIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFREPRLLIITDPRTDAQAVKESSYVNVPVIAFCDSDSPLNYVDVAIPANNKGKLSIGLLYWMLAREVLRLRGTVPRDAPWDVPVDLFFHREPEELEKTE 216
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BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: A0A1V9ZU98_9STRA (40S ribosomal protein SA n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZU98_9STRA)

HSP 1 Score: 357 bits (915), Expect = 3.380e-121
Identity = 188/260 (72.31%), Postives = 212/260 (81.54%), Query Frame = 1 
Query:   10 RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEAAVPAFEQEQPTA-W-----AAEAPMPAPPVDVYAPEAAYGAPPPPAAAVGNWDA 771
            R+EDIQKML+A VHIGTRN+D QM +YIWRRR DG+HI+N+GKTWEKL+LAA+IIVA+ENP DVIAISARPYGQRAVLKFAQYTG Q+IA RFTPGTFTNQITKQFREPRLLI+TDPRTDAQ VRE++YVNVPVIAFCDSDSPL +VDVA+PANNKGKLSIGL+YWLL+REVLR+RGTI+R  PWDV VDLFFYRD EELEK EEA   A ++    A W     AAEA   AP +    P A +G       A G W A
Sbjct:    5 REEDIQKMLAAMVHIGTRNADAQMGDYIWRRRNDGIHIINVGKTWEKLMLAAKIIVAVENPADVIAISARPYGQRAVLKFAQYTGCQAIAGRFTPGTFTNQITKQFREPRLLIITDPRTDAQPVRESAYVNVPVIAFCDSDSPLRYVDVAIPANNKGKLSIGLLYWLLSREVLRLRGTISRALPWDVAVDLFFYRDPEELEKAEEAQTGAADESMARAGWTNEAVAAEAATEAPTLYTAEPTAEWGT------AGGEWGA 258
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BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: A0A5D6XMB2_9STRA (40S ribosomal protein SA n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMB2_9STRA)

HSP 1 Score: 355 bits (910), Expect = 1.880e-120
Identity = 191/270 (70.74%), Postives = 219/270 (81.11%), Query Frame = 1 
Query:   10 RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEAAVPAFEQEQPTAWAAEAPMPAPPVDVYAPEAAYGAPPPPAAAV-----------GNWDAPAASA 786
            R+EDI+ ML+AQVHIGTRN+D++M +YIWRRR DGV+I+NIGKTWEKL+LAAR+IVAIENP DVIAISARPYGQRAVLKFAQYTG+ SIA RFTPGTFTNQITKQFREPRLLI+TDPRTD+Q+VRE+S+VNVPVIAFCDSDSPL +VDVA+PANNKGKLSIGL+YWLLAREVLR+RGTI+R  PWDV VDLF YRD EEL+K EEA   A E+ Q  A   +A    P   V+A E+A       AAA            G+WDAPAA A
Sbjct:    5 REEDIKLMLAAQVHIGTRNADSKMADYIWRRRNDGVNIINIGKTWEKLMLAARVIVAIENPSDVIAISARPYGQRAVLKFAQYTGSSSIAGRFTPGTFTNQITKQFREPRLLIITDPRTDSQSVRESSFVNVPVIAFCDSDSPLQYVDVAIPANNKGKLSIGLLYWLLAREVLRLRGTISRALPWDVAVDLFLYRDPEELKKAEEAQSGAAEEAQARAGWGDATEAQPEPAVFAAESAVEWTAGAAAAAPXXXXXXXXXAGSWDAPAAGA 274
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BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: D0MUE8_PHYIT (40S ribosomal protein SA n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0MUE8_PHYIT)

HSP 1 Score: 355 bits (910), Expect = 2.230e-120
Identity = 171/215 (79.53%), Postives = 198/215 (92.09%), Query Frame = 1 
Query:   10 RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEAAVPAFEQEQ 654
            R+EDI+ ML+AQVHIGTRN+D++M +YIWRRR DG+HI+N+GKTWEKL+LAAR+IVA+ENP+DVIAISARPYGQRAVLKFAQ+TG Q+IASRFTPGTFTNQITKQFREPRLL++TDPRTD+QAVRE+S+VNVPVIAFCDSDSPL  VDVA+PANNKGKLSIGL+YWLLAREVLR+RGTI+R  PWDV VDLF YRD EEL+K EEA   A E+ Q
Sbjct:    5 REEDIKMMLAAQVHIGTRNADSKMADYIWRRRNDGIHIINVGKTWEKLMLAARVIVAVENPEDVIAISARPYGQRAVLKFAQHTGCQAIASRFTPGTFTNQITKQFREPRLLLITDPRTDSQAVRESSFVNVPVIAFCDSDSPLQFVDVAIPANNKGKLSIGLLYWLLAREVLRLRGTISRTLPWDVAVDLFLYRDPEELKKAEEAQATAAEEAQ 219
[Close]
BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: A0A7S1BNQ5_9STRA (40S ribosomal protein SA n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNQ5_9STRA)

HSP 1 Score: 355 bits (912), Expect = 2.720e-120
Identity = 168/206 (81.55%), Postives = 193/206 (93.69%), Query Frame = 1 
Query:   10 RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEA 627
            ++EDIQKMLSA +H+GTRNSDNQMKEYIWRRR DG+H+LNIG+TWEKLVLAAR+IVA+ENP+DV+AISARPYG RAVLKFA YTGA+ IA RFTPGTFTNQITKQFREPRLLIVTDPRTD+QAVRE+SYVN+PV+AFCDSDSPL +VDVA+PANNK KLS+GL+YWLLAREVLR+RGTI+R   W+VPVDLFF+RD +ELEK EEA
Sbjct:   14 KEEDIQKMLSANIHVGTRNSDNQMKEYIWRRRADGIHVLNIGRTWEKLVLAARVIVAVENPEDVVAISARPYGMRAVLKFAHYTGAKCIAGRFTPGTFTNQITKQFREPRLLIVTDPRTDSQAVRESSYVNIPVVAFCDSDSPLKYVDVAIPANNKAKLSLGLLYWLLAREVLRLRGTISRAADWNVPVDLFFHRDPDELEKAEEA 219
[Close]
BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Match: A0A485LRJ6_9STRA (40S ribosomal protein SA n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LRJ6_9STRA)

HSP 1 Score: 352 bits (903), Expect = 2.180e-119
Identity = 187/286 (65.38%), Postives = 218/286 (76.22%), Query Frame = 1 
Query:   10 RDEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFREPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKGKLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEAAVPAFEQEQPTAW---AAEAPMPAPPVDVYAPEAAYGAPPPPAAAVGNWDAPAASADPMGGDWGAAPAAXXXXXXXXWDA 858
            R+EDIQKML+A VHIGTRN+D+QM +YIWRRR DG+HI+N+G+TWEKL+LAA++IVA+ENP DVIAISARPYGQRAVLKFAQYTG Q+IA RFTPGTFTNQITKQFREPRLLI+TDPRTD+Q VRE++YVNVPVIAFCD+DSPL +VDVA+PANNKGKLSIGL+YWLL+REVLR+RGTI+R  PW+V VDLFFYRD EEL K EEA   A ++     W   AA A       ++Y PE                  PAA     GG+WGA  AA        WDA
Sbjct:    6 REEDIQKMLAAMVHIGTRNADSQMGDYIWRRRNDGIHIINVGQTWEKLMLAAKVIVAVENPADVIAISARPYGQRAVLKFAQYTGCQAIAGRFTPGTFTNQITKQFREPRLLIITDPRTDSQPVRESAYVNVPVIAFCDTDSPLRYVDVAIPANNKGKLSIGLLYWLLSREVLRLRGTISRALPWEVAVDLFFYRDPEELAKAEEAQTGAVDEVARAGWTNEAAAAETATEQPNLYTPE------------------PAAEWGTAGGEWGADAAAGG------WDA 267
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1769.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DAK2_HETAK3.000e-13078.5140S ribosomal protein SA n=2 Tax=Heterosigma akash... [more]
A0A8J2SYU6_9STRA3.300e-12872.3040S ribosomal protein SA n=1 Tax=Pelagomonas calce... [more]
F0Y9V2_AURAN2.260e-12681.78Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
D7FHP2_ECTSI1.310e-12574.2640S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CJ71_9STRA9.580e-12587.2540S ribosomal protein SA n=1 Tax=Tribonema minus T... [more]
A0A1V9ZU98_9STRA3.380e-12172.3140S ribosomal protein SA n=3 Tax=Saprolegniaceae T... [more]
A0A5D6XMB2_9STRA1.880e-12070.7440S ribosomal protein SA n=1 Tax=Pythium brassicum... [more]
D0MUE8_PHYIT2.230e-12079.5340S ribosomal protein SA n=15 Tax=Peronosporaceae ... [more]
A0A7S1BNQ5_9STRA2.720e-12081.5540S ribosomal protein SA n=1 Tax=Corethron hystrix... [more]
A0A485LRJ6_9STRA2.180e-11965.3840S ribosomal protein SA n=2 Tax=Aphanomyces TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1769contigP-wetherbeei_contig1769:3124..3981 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FHP2
Preferred nameRPS0
PFAMs40S_SA_C,Ribosomal_S2
Model size858
Max annot lvl2759|Eukaryota
KEGG koko:K02998
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000447,GO:0000460,GO:0000461,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006518,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0015031,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0030684,GO:0030686,GO:0031123,GO:0031125,GO:0031503,GO:0032991,GO:0033036,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0042255,GO:0042274,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043628,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051029,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0065003,GO:0070727,GO:0070925,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097064,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons1
Evalue9.17e-123
EggNOG OGsCOG0052@1|root,KOG0830@2759|Eukaryota
Descriptionstructural constituent of ribosome
Cds size828
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186123.3403118-UTR-P-wetherbeei_contig1769:3123..31531683186123.3403118-UTR-P-wetherbeei_contig1769:3123..3153Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1769 3124..3153 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186123.3501055-CDS-P-wetherbeei_contig1769:3153..39811683186123.3501055-CDS-P-wetherbeei_contig1769:3153..3981Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1769 3154..3981 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1769.2.1prot_P-wetherbeei_contig1769.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1769 3154..3981 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1769.2.1

>prot_P-wetherbeei_contig1769.2.1 ID=prot_P-wetherbeei_contig1769.2.1|Name=mRNA_P-wetherbeei_contig1769.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp
MLSAQVHIGTRNSDNQMKEYIWRRRQDGVHILNIGKTWEKLVLAARIIVA
IENPQDVIAISARPYGQRAVLKFAQYTGAQSIASRFTPGTFTNQITKQFR
EPRLLIVTDPRTDAQAVREASYVNVPVIAFCDSDSPLPHVDVAVPANNKG
KLSIGLIYWLLAREVLRMRGTIARDQPWDVPVDLFFYRDVEELEKPEEAA
VPAFEQEQPTAWAAEAPMPAPPVDVYAPEAAYGAPPPPAAAVGNWDAPAA
SADPMGGDWGAAPAAPPGAVGGGWDA
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mRNA from alignment at P-wetherbeei_contig1769:3124..3981+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1769.2.1 ID=mRNA_P-wetherbeei_contig1769.2.1|Name=mRNA_P-wetherbeei_contig1769.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig1769:3124..3981+ (Phaeothamnion wetherbeei SAG_119_79)
TGCAAACACAGGGATGAGGACATCCAGAAGATGCTCTCTGCCCAGGTGCA
CATCGGCACACGCAACAGCGACAACCAGATGAAGGAGTACATCTGGCGGC
GGCGGCAGGACGGCGTTCACATCCTCAATATAGGCAAGACGTGGGAGAAG
CTGGTGCTCGCGGCGCGCATCATCGTGGCCATCGAGAACCCGCAGGACGT
GATTGCCATCTCGGCCCGCCCCTACGGCCAGCGCGCCGTCCTCAAGTTCG
CGCAGTACACGGGCGCGCAGTCCATCGCCAGCCGCTTCACCCCGGGCACC
TTCACCAACCAGATCACCAAGCAGTTCCGTGAGCCGCGCCTGCTCATTGT
GACGGACCCGCGCACTGATGCCCAGGCCGTCCGCGAGGCGTCCTACGTCA
ACGTGCCGGTCATCGCCTTCTGCGACTCGGACTCGCCGCTGCCGCACGTG
GATGTCGCAGTGCCCGCCAACAACAAGGGCAAGCTCTCGATCGGCCTTAT
CTACTGGCTGCTCGCGCGCGAGGTGCTCCGCATGCGCGGCACGATCGCTC
GCGACCAGCCGTGGGACGTACCCGTGGACCTCTTCTTCTACCGCGACGTG
GAGGAGCTCGAGAAGCCGGAGGAGGCCGCAGTGCCGGCGTTTGAGCAGGA
ACAGCCGACCGCCTGGGCCGCCGAGGCGCCCATGCCGGCGCCGCCGGTGG
ATGTATACGCGCCCGAGGCCGCCTACGGCGCGCCACCGCCGCCGGCGGCC
GCCGTCGGCAACTGGGACGCGCCGGCGGCGTCGGCGGACCCGATGGGCGG
GGACTGGGGCGCGGCGCCGGCTGCGCCGCCCGGTGCCGTCGGCGGGGGCT
GGGACGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1769:3124..3981+

>mRNA_P-wetherbeei_contig1769.2.1 ID=mRNA_P-wetherbeei_contig1769.2.1|Name=mRNA_P-wetherbeei_contig1769.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig1769:3124..3981+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCTCTGCCCAGGTGCACATCGGCACACGCAACAGCGACAACCAGAT
GAAGGAGTACATCTGGCGGCGGCGGCAGGACGGCGTTCACATCCTCAATA
TAGGCAAGACGTGGGAGAAGCTGGTGCTCGCGGCGCGCATCATCGTGGCC
ATCGAGAACCCGCAGGACGTGATTGCCATCTCGGCCCGCCCCTACGGCCA
GCGCGCCGTCCTCAAGTTCGCGCAGTACACGGGCGCGCAGTCCATCGCCA
GCCGCTTCACCCCGGGCACCTTCACCAACCAGATCACCAAGCAGTTCCGT
GAGCCGCGCCTGCTCATTGTGACGGACCCGCGCACTGATGCCCAGGCCGT
CCGCGAGGCGTCCTACGTCAACGTGCCGGTCATCGCCTTCTGCGACTCGG
ACTCGCCGCTGCCGCACGTGGATGTCGCAGTGCCCGCCAACAACAAGGGC
AAGCTCTCGATCGGCCTTATCTACTGGCTGCTCGCGCGCGAGGTGCTCCG
CATGCGCGGCACGATCGCTCGCGACCAGCCGTGGGACGTACCCGTGGACC
TCTTCTTCTACCGCGACGTGGAGGAGCTCGAGAAGCCGGAGGAGGCCGCA
GTGCCGGCGTTTGAGCAGGAACAGCCGACCGCCTGGGCCGCCGAGGCGCC
CATGCCGGCGCCGCCGGTGGATGTATACGCGCCCGAGGCCGCCTACGGCG
CGCCACCGCCGCCGGCGGCCGCCGTCGGCAACTGGGACGCGCCGGCGGCG
TCGGCGGACCCGATGGGCGGGGACTGGGGCGCGGCGCCGGCTGCGCCGCC
CGGTGCCGTCGGCGGGGGCTGGGACGCG
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