mRNA_P-wetherbeei_contig17674.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: A0A2S2PQL9_SCHGA (Uncharacterized protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PQL9_SCHGA) HSP 1 Score: 149 bits (375), Expect = 9.760e-43 Identity = 73/103 (70.87%), Postives = 80/103 (77.67%), Query Frame = 1
Query: 7 LARHMKSLTHYTKGTPSPRSGAPTACRLPISGSVSLPLSGCFSPFPHGTCSLSVAEEYLGLEGGPPMFRQDFTCPALLESFAV*----RLRGYHPLWPTFPDR 303
LA KSLTHYTKGTPSP GAPTACR P+S +VSLP SGCFSPFPHGT SLSV++EYL EGGPP+FRQDFTCPALL V R++GYH LWP FP R
Sbjct: 3 LATECKSLTHYTKGTPSPLKGAPTACRRPVSETVSLPSSGCFSPFPHGTGSLSVSKEYLAFEGGPPIFRQDFTCPALLVVPLVPQRGFRIQGYHLLWPGFPSR 105
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: A0A6G5ADV0_RHIMP (Uncharacterized protein (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5ADV0_RHIMP) HSP 1 Score: 139 bits (350), Expect = 6.530e-40 Identity = 66/68 (97.06%), Postives = 66/68 (97.06%), Query Frame = 3
Query: 87 ASDFRICFTPLVGVLFTFPSRYLFTIGRRGVLRLGGWSPHVQTGFHVSRPTRVLRCLTSTGLSPAMAD 290
ASDFRICFTPLVGVLFTFPSRYLFTIGRRGVLRLGGWSPHVQTGFHVSRPTRV CLTSTGLSPAMAD
Sbjct: 1 ASDFRICFTPLVGVLFTFPSRYLFTIGRRGVLRLGGWSPHVQTGFHVSRPTRVSCCLTSTGLSPAMAD 68
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: A0A0V0GKN2_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GKN2_SOLCH) HSP 1 Score: 135 bits (341), Expect = 1.890e-38 Identity = 81/136 (59.56%), Postives = 90/136 (66.18%), Query Frame = 1
Query: 7 LARHMKSLTHYTKGTPSPRSGAPT--ACRLPISGSVSLPLSGCFSPFPHGTCSLSVAEEYLGLEGGPPMFRQDFTCPALLESFAV*----RLRGYHPLWPTFPDRS-TLFHEGTGLVPVRSPLLRESRLMSFPPGT 393
LA KSLTHYTKGT SP +G+ AC I PL G FSPFPHGT SLSV EYL LE GPP+FRQDFTCPALL + +V R+RGYHPLWP FP RS + + LVP RSPLL ESRL+S P T
Sbjct: 3 LATEXKSLTHYTKGTQSPLAGSYFLYACGFRI---YFTPLPGFFSPFPHGTGSLSVDHEYLALEDGPPIFRQDFTCPALLVARSVPPPRFRIRGYHPLWPDFPFRSASKAAKSCRLVPFRSPLLWESRLISVPRAT 135
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: Q3BKI1_9PROT (Uncharacterized protein n=2 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=Q3BKI1_9PROT) HSP 1 Score: 138 bits (348), Expect = 5.480e-38 Identity = 66/82 (80.49%), Postives = 71/82 (86.59%), Query Frame = 1
Query: 1 LKLARHMKSLTHYTKGTPSPRSGAPTACRLPISGSVSLPLSGCFSPFPHGTCSLSVAEEYLGLEGGPPMFRQDFTCPALLES 246
LKLA + SLTHYTKGTPSP APTACR +SG+VSLPLSGCFSPFPHGT SLSV EEYLGLE GPPMFRQDFTCPALL++
Sbjct: 61 LKLAAYTNSLTHYTKGTPSPFKRAPTACRHSVSGTVSLPLSGCFSPFPHGTSSLSVTEEYLGLEDGPPMFRQDFTCPALLKA 142
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: E0XW25_9PROT (Uncharacterized protein n=1 Tax=uncultured Rhodospirillales bacterium HF4000_24M03 TaxID=710788 RepID=E0XW25_9PROT) HSP 1 Score: 131 bits (329), Expect = 3.130e-37 Identity = 67/90 (74.44%), Postives = 72/90 (80.00%), Query Frame = 3
Query: 126 VLFTFPSRYLFTIGRRGVLRLGGWSPHVQTGFHVSRPTRVLRCL-TSTGLSPAMADLSRSFDFISRRHWPGPGSLATTTGVSVDVLSSRY 392
+LFTFPSRY +TIGR+GVLRLGGWSPHVQTGFHVSRPTRV + T TGLSP+MA LSR F I WPGP SLA T GVSVDVLSS Y
Sbjct: 1 MLFTFPSRYWYTIGRQGVLRLGGWSPHVQTGFHVSRPTRVQQTTDTHTGLSPSMAGLSRPFWLIVCWRWPGPRSLAATDGVSVDVLSSSY 90
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: UPI001A08AA19 (Uncharacterized protein n=1 Tax=Pseudorhizobium halotolerans TaxID=1233081 RepID=UPI001A08AA19) HSP 1 Score: 135 bits (339), Expect = 7.950e-37 Identity = 74/113 (65.49%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 1 LKLARHMKSLTHYTKGTPSPRSGAPTACRLPISGSVSLPLSGCFSPFPHGTCSLSVAEEYLGLEGGPPMFRQDFTCPALLESFAV*RLRGYHPLWPTFPDRSTLFHEGTGLVP 339
LKLA + KSLTHYTKGTPSP APT CR P+SGS+SLP SGCFSPFPHGTCSLSV EYLGLE G PMFRQDFTCPALL+ G L PT S LF G +P
Sbjct: 46 LKLACYTKSLTHYTKGTPSPLR-APTVCRHPVSGSISLPSSGCFSPFPHGTCSLSVMHEYLGLESGLPMFRQDFTCPALLKDNQCSTPTG---LSPTIAKLSNLF----GFIP 150
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: A0A6A5L4G5_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L4G5_LUPAL) HSP 1 Score: 141 bits (356), Expect = 1.780e-36 Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 1
Query: 1 LKLARHMKSLTHYTKGTPSPRSGAPTACRLPISGSVSLPLSGCFSPFPHGTCSLSVAEEYLGLEGGPPMFRQDFTCPALL 240
LKLA + KSLTHYTKGTPSP APTACR P+SG+VSLPLSGCFSPFPHGT +LSV EEYLGLEGGPPMFRQ FTCPALL
Sbjct: 19 LKLAAYSKSLTHYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALL 98
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: A0A6A5L866_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L866_LUPAL) HSP 1 Score: 141 bits (356), Expect = 2.620e-36 Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 1
Query: 1 LKLARHMKSLTHYTKGTPSPRSGAPTACRLPISGSVSLPLSGCFSPFPHGTCSLSVAEEYLGLEGGPPMFRQDFTCPALL 240
LKLA + KSLTHYTKGTPSP APTACR P+SG+VSLPLSGCFSPFPHGT +LSV EEYLGLEGGPPMFRQ FTCPALL
Sbjct: 19 LKLAAYSKSLTHYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALL 98
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: A0A6A5L6S4_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L6S4_LUPAL) HSP 1 Score: 141 bits (356), Expect = 2.650e-36 Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 1
Query: 1 LKLARHMKSLTHYTKGTPSPRSGAPTACRLPISGSVSLPLSGCFSPFPHGTCSLSVAEEYLGLEGGPPMFRQDFTCPALL 240
LKLA + KSLTHYTKGTPSP APTACR P+SG+VSLPLSGCFSPFPHGT +LSV EEYLGLEGGPPMFRQ FTCPALL
Sbjct: 19 LKLAAYSKSLTHYTKGTPSPHEEAPTACRHPVSGTVSLPLSGCFSPFPHGTGALSVTEEYLGLEGGPPMFRQGFTCPALL 98
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Match: C9YEF0_CURXX (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=C9YEF0_CURXX) HSP 1 Score: 126 bits (316), Expect = 3.080e-34 Identity = 68/107 (63.55%), Postives = 76/107 (71.03%), Query Frame = 1
Query: 115 PLSGCFSPFPHGTCSLSVAEEYLGLEGGPPMFRQDFTCPALLESFAV*R----LRGYHPLWPTFPDRSTLFHEGT-GLVPVRSPLLRESRLMSFPPGTEMFQFPGFA 420
PL G FSPFPHGT SLSV +EYL LE GPP+FRQDF+CPALL + +V +RGYHPLWP FP S + T L+ RSPLL ESRLMSFP TEMFQF FA
Sbjct: 5 PLPGFFSPFPHGTSSLSVNDEYLALEDGPPIFRQDFSCPALLFASSVPHRSFHVRGYHPLWPAFPGCSVMSCAITCRLLRFRSPLLSESRLMSFPRATEMFQFTRFA 111 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17674.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17674.2.1 >prot_P-wetherbeei_contig17674.2.1 ID=prot_P-wetherbeei_contig17674.2.1|Name=mRNA_P-wetherbeei_contig17674.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=80bp MKSLTHYTKGTPSPRSGAPTACRLPISGSVSLPLSGCFSPFPHGTCSLSVback to top mRNA from alignment at P-wetherbeei_contig17674:475..894+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17674.2.1 ID=mRNA_P-wetherbeei_contig17674.2.1|Name=mRNA_P-wetherbeei_contig17674.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=420bp|location=Sequence derived from alignment at P-wetherbeei_contig17674:475..894+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17674:475..894+ >mRNA_P-wetherbeei_contig17674.2.1 ID=mRNA_P-wetherbeei_contig17674.2.1|Name=mRNA_P-wetherbeei_contig17674.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=240bp|location=Sequence derived from alignment at P-wetherbeei_contig17674:475..894+ (Phaeothamnion wetherbeei SAG_119_79)back to top |