mRNA_P-wetherbeei_contig17666.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: A0A7C4TR50_9HYPH (50S ribosomal protein L1 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TR50_9HYPH) HSP 1 Score: 384 bits (986), Expect = 1.730e-133 Identity = 195/234 (83.33%), Postives = 217/234 (92.74%), Query Frame = 1
Query: 1 MAKLGKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTLSSGQQ 702
M K+GKR++AAR G+DR KAY LDEAVKLVKSRAKAKFDETV+IA+NLGVDPKHADQMVRGVC LPNGSGRT+RVAVFA+G KA+EAKAAGAD+VGAEDLVE V KGTINFDRCIATPDMM LVGRLGKVLGPRGLMPNPRVGTVTMDVA AVKGAKGGAVEFR+EK+GIVHAGVGKASF E LVENIRAFVDAV++A+P+GAKG +I+KV+IKSTQGPG+KVD G++ GQQ
Sbjct: 1 MGKIGKRMRAAREGIDRAKAYSLDEAVKLVKSRAKAKFDETVDIAINLGVDPKHADQMVRGVCNLPNGSGRTLRVAVFARGAKAEEAKAAGADVVGAEDLVEQVQKGTINFDRCIATPDMMALVGRLGKVLGPRGLMPNPRVGTVTMDVASAVKGAKGGAVEFRIEKAGIVHAGVGKASFPESKLVENIRAFVDAVNKARPSGAKGTFIKKVAIKSTQGPGVKVDQGSILGGQQ 234
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: UPI000374294C (50S ribosomal protein L1 n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI000374294C) HSP 1 Score: 373 bits (958), Expect = 6.010e-129 Identity = 188/225 (83.56%), Postives = 212/225 (94.22%), Query Frame = 1
Query: 13 GKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTL 687
GKR A R G+DR KAYG+DEAV+L+K+RAKAKFDETVE+AMNLGVDPKHADQMVRGVC LPNGSGRT RVAVFA+G KA+EAKAAGAD+VGAEDLV++VSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVA AVKGAKGG+VEFRVEK+GIVHAGVGKASFTE+ALVENI+AFV+AVS+AKPAG+KG YI+KVS+ ST GPGLK++ G++
Sbjct: 23 GKRNAAVREGIDRNKAYGVDEAVRLIKARAKAKFDETVEVAMNLGVDPKHADQMVRGVCNLPNGSGRTSRVAVFARGPKAEEAKAAGADVVGAEDLVDIVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVASAVKGAKGGSVEFRVEKAGIVHAGVGKASFTEQALVENIKAFVEAVSKAKPAGSKGTYIKKVSLSSTMGPGLKIETGSV 247
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: V5SFP9_9HYPH (50S ribosomal protein L1 n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SFP9_9HYPH) HSP 1 Score: 372 bits (955), Expect = 1.490e-128 Identity = 188/225 (83.56%), Postives = 207/225 (92.00%), Query Frame = 1
Query: 13 GKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTL 687
GKR R G+D KAY +DEAV+LVK RAKAKFDETVE+AMNLGVDPKHADQMVRGVC LPNGSGRT RVAVFA+G KADEAKAAGAD+VGAEDLVE+VSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDV GAVKGAKGG+VEFRVEK+GIVHAG+GKASFTE ALVENI+AFVDAV++AKPAG+KG YI+KVS+ ST GPG++VD GT+
Sbjct: 19 GKRNAEVRKGIDANKAYAIDEAVRLVKERAKAKFDETVEVAMNLGVDPKHADQMVRGVCNLPNGSGRTARVAVFARGPKADEAKAAGADVVGAEDLVEIVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVTGAVKGAKGGSVEFRVEKAGIVHAGIGKASFTEDALVENIKAFVDAVAKAKPAGSKGTYIKKVSVSSTMGPGVRVDTGTV 243
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: A0A2W4KX75_9PROT (50S ribosomal protein L1 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KX75_9PROT) HSP 1 Score: 368 bits (944), Expect = 4.020e-127 Identity = 188/232 (81.03%), Postives = 209/232 (90.09%), Query Frame = 1
Query: 1 MAKLGKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTLSSG 696
MAK+GKRI+ AR+ VDR KAY LDEA+KLVK A KFDETV+IA+NLGVDPKHADQ+VRGVC LPNGSGRTVRVAVFA+G KADEAKAAGADIVGAEDL E V +G INFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVK AKGGA+EFRVEK+GIVHAGVGK SF+E+ L ENIRAF+DAV+RAKP+GAKG Y++KV+I ST GPG+KVDH T+ SG
Sbjct: 1 MAKVGKRIRDARAKVDRNKAYPLDEAIKLVKETASVKFDETVDIAVNLGVDPKHADQVVRGVCQLPNGSGRTVRVAVFARGAKADEAKAAGADIVGAEDLFEQVQRGEINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKAAKGGAIEFRVEKAGIVHAGVGKVSFSEQQLAENIRAFIDAVNRAKPSGAKGTYLKKVAISSTMGPGIKVDHNTILSG 232
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: A0A537S1Z2_9PROT (50S ribosomal protein L1 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A537S1Z2_9PROT) HSP 1 Score: 368 bits (944), Expect = 4.310e-127 Identity = 184/229 (80.35%), Postives = 210/229 (91.70%), Query Frame = 1
Query: 1 MAKLGKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTL 687
M+K+GKR+K AR GVDR KAY +DEA+K+VK RAKAKFDETVE++MNLGVDPKHADQMVRGVC LPNGSGRT RVAVFA+G KA+EAKAAGAD+VGAEDLVE VSKGTINFDRCIATPD+MGLVGRLGKVLGPRGLMPNPRVGTVTMDV AVKGAKGGAVEFRVEK+GIV AGVGKASF++K L ENI+AFVDAV ++KPAGAKG Y++K+S+ STQG G+K+D G++
Sbjct: 1 MSKIGKRLKGAREGVDREKAYAIDEAIKVVKERAKAKFDETVEVSMNLGVDPKHADQMVRGVCNLPNGSGRTQRVAVFARGAKAEEAKAAGADVVGAEDLVEQVSKGTINFDRCIATPDLMGLVGRLGKVLGPRGLMPNPRVGTVTMDVTSAVKGAKGGAVEFRVEKAGIVQAGVGKASFSDKQLAENIKAFVDAVVKSKPAGAKGTYVKKISVSSTQGVGVKIDAGSV 229
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: A0A258KX66_9HYPH (50S ribosomal protein L1 n=1 Tax=Hyphomicrobium sp. 32-62-53 TaxID=1970390 RepID=A0A258KX66_9HYPH) HSP 1 Score: 368 bits (945), Expect = 4.980e-127 Identity = 188/232 (81.03%), Postives = 209/232 (90.09%), Query Frame = 1
Query: 13 GKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTLSSGQQSN 708
GKR A GVDR KAYG+DEAVKL+K RAKAKFDET+EI+MNLGVDPKHADQMVRGVC LPNGSGRT RVAVFA+G KA+EAKAAGADIVGAEDLVE+VSKG INFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVT+DV GAV GAKGG+VEFRVEKSGI+HAGVGKASF EKALVENI+AFVDAV +AKP G+KG Y++KVS+ ST GPG+KV+ ++SSG +N
Sbjct: 19 GKRAFAISKGVDRTKAYGVDEAVKLIKERAKAKFDETIEISMNLGVDPKHADQMVRGVCNLPNGSGRTARVAVFARGAKAEEAKAAGADIVGAEDLVEIVSKGQINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTVDVVGAVNGAKGGSVEFRVEKSGIIHAGVGKASFGEKALVENIKAFVDAVVKAKPPGSKGTYLKKVSLSSTMGPGVKVETSSVSSGPAAN 250
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: UPI0009320474 (50S ribosomal protein L1 n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI0009320474) HSP 1 Score: 367 bits (942), Expect = 1.640e-126 Identity = 184/225 (81.78%), Postives = 207/225 (92.00%), Query Frame = 1
Query: 13 GKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTL 687
GKR + G+DR KAYG++EAV+L+KSRAKAKFDET+E+AMNLGVDPKHADQ+VRGVC LPNGSGRT RVAVFA+G KA+EAKAAGAD+VGAEDLVE VSKG INFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDV A+KGAKGG+VEFRVEK+GIVHAG+GKASFTE+ALVENI+AFVDAVS+ KPAGAKG YI+KVS+ ST GPG+KVD GT+
Sbjct: 23 GKRNAEVQKGIDRNKAYGVEEAVRLIKSRAKAKFDETIEVAMNLGVDPKHADQVVRGVCNLPNGSGRTARVAVFARGPKAEEAKAAGADVVGAEDLVESVSKGVINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVTSAIKGAKGGSVEFRVEKAGIVHAGIGKASFTEQALVENIKAFVDAVSKGKPAGAKGTYIKKVSLSSTMGPGVKVDTGTV 247
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: A0A2S5P4P6_HYPSQ (50S ribosomal protein L1 n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5P4P6_HYPSQ) HSP 1 Score: 365 bits (936), Expect = 1.210e-125 Identity = 187/232 (80.60%), Postives = 209/232 (90.09%), Query Frame = 1
Query: 13 GKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTLSSGQQSN 708
GKR A G+DR KAY +DEAVKL+K RAK+KFDETVEIAMNLGVDPKHADQMVRGVC LPNGSGRT RVAVFA+G KA+EAKAAGAD+VGAEDLVE+VSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDV GAVKGAKGG+VEFRVEKSGIVHAGVGKASFTE ALVENI+AFVDAV +A+P G+KG Y++KVS+ ST GPG K++ +++SG +N
Sbjct: 20 GKRQAAISVGIDRNKAYLVDEAVKLIKERAKSKFDETVEIAMNLGVDPKHADQMVRGVCNLPNGSGRTSRVAVFARGAKAEEAKAAGADVVGAEDLVEIVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVVGAVKGAKGGSVEFRVEKSGIVHAGVGKASFTESALVENIKAFVDAVVKARPQGSKGTYLKKVSLSSTMGPGFKLETSSVTSGAAAN 251
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: A0A1I7ND19_9HYPH (50S ribosomal protein L1 n=11 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7ND19_9HYPH) HSP 1 Score: 364 bits (935), Expect = 1.600e-125 Identity = 183/228 (80.26%), Postives = 210/228 (92.11%), Query Frame = 1
Query: 13 GKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTLSSG 696
GKR++A + G+ K+YG+DEAVK++K RAKAKFDET+E+A+NLGVDPKHADQMVRGVC LPNGSGRT RVAVFA+G KA+EAKAAGADIVGAEDLVE+VSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDV AVKGAKGG+VEFRVEK+GIVHAGVGKASFTE+ALV+NI+AFVDAV +AKP G+KG Y++KVS+ ST GPGLK+D T++SG
Sbjct: 19 GKRMEAIKQGLPAGKSYGVDEAVKIIKERAKAKFDETIEVAVNLGVDPKHADQMVRGVCNLPNGSGRTARVAVFARGAKAEEAKAAGADIVGAEDLVEIVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVVTAVKGAKGGSVEFRVEKAGIVHAGVGKASFTEEALVQNIKAFVDAVVKAKPTGSKGTYLKKVSLSSTMGPGLKLDTATVASG 246
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Match: A0A2V3U819_9HYPH (50S ribosomal protein L1 n=3 Tax=Chelatococcus TaxID=28209 RepID=A0A2V3U819_9HYPH) HSP 1 Score: 361 bits (927), Expect = 1.450e-124 Identity = 182/229 (79.48%), Postives = 207/229 (90.39%), Query Frame = 1
Query: 1 MAKLGKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVDPKHADQMVRGVCTLPNGSGRTVRVAVFAKGGKADEAKAAGADIVGAEDLVELVSKGTINFDRCIATPDMMGLVGRLGKVLGPRGLMPNPRVGTVTMDVAGAVKGAKGGAVEFRVEKSGIVHAGVGKASFTEKALVENIRAFVDAVSRAKPAGAKGNYIRKVSIKSTQGPGLKVDHGTL 687
MAK+ KRI A R G+DR+K YGLDEAVK+VK RAKAKFDET+E+AMNLGVDP+HADQMVRGVC LPNGSGRTVRVAVFA+G KADEAKAAGADIVGAEDL+E+V GTINFDRCIATPD+M LVGRLGKVLGPRGLMPNP+VGTVTMDV GAV AKGGAVEFRVEK+GIVHAG+GKASF E LVENI+AFVDAVS+A+P+GAKG Y+++V+I ST GPG+KVD ++
Sbjct: 1 MAKVAKRITALRDGIDRVKLYGLDEAVKMVKERAKAKFDETIEVAMNLGVDPRHADQMVRGVCNLPNGSGRTVRVAVFARGAKADEAKAAGADIVGAEDLLEIVQGGTINFDRCIATPDLMPLVGRLGKVLGPRGLMPNPKVGTVTMDVKGAVAAAKGGAVEFRVEKAGIVHAGIGKASFDEGKLVENIKAFVDAVSKARPSGAKGTYVQRVAISSTMGPGVKVDPASV 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17666.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17666.1.1 >prot_P-wetherbeei_contig17666.1.1 ID=prot_P-wetherbeei_contig17666.1.1|Name=mRNA_P-wetherbeei_contig17666.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=237bp MAKLGKRIKAARSGVDRLKAYGLDEAVKLVKSRAKAKFDETVEIAMNLGVback to top mRNA from alignment at P-wetherbeei_contig17666:286..996- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17666.1.1 ID=mRNA_P-wetherbeei_contig17666.1.1|Name=mRNA_P-wetherbeei_contig17666.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig17666:286..996- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17666:286..996- >mRNA_P-wetherbeei_contig17666.1.1 ID=mRNA_P-wetherbeei_contig17666.1.1|Name=mRNA_P-wetherbeei_contig17666.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=711bp|location=Sequence derived from alignment at P-wetherbeei_contig17666:286..996- (Phaeothamnion wetherbeei SAG_119_79)back to top |