mRNA_P-wetherbeei_contig17661.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17661.1.1
Unique NamemRNA_P-wetherbeei_contig17661.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A127F245_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127F245_9HYPH)

HSP 1 Score: 270 bits (690), Expect = 3.230e-90
Identity = 129/180 (71.67%), Postives = 144/180 (80.00%), Query Frame = 1
Query:    1 MTASANDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            M AS   VL FWREAG +KWF+KDAAFDE+IR RFLETYEAAAAGQL  WE++ EGA AL++VLDQFPRNMFR   R FAAD LA+ +A+RA+A GFD    + ER FFYLPF HSE  ADQ+RC  L R+ G A NVKWAELHADIIRRFGRFPHRN VLGR+TT EEQAFLDGGGF G
Sbjct:    1 MIASYAQVLAFWREAGKDKWFEKDAAFDEAIRRRFLETYEAAAAGQLKEWEESREGALALVIVLDQFPRNMFRGSARAFAADHLARGIADRAMALGFDLATPVEERAFFYLPFEHSEQLADQERCCTLFRATGDADNVKWAELHADIIRRFGRFPHRNVVLGRATTAEEQAFLDGGGFTG 180          
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A6N7GTI8_9HYPH (DUF924 family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GTI8_9HYPH)

HSP 1 Score: 263 bits (673), Expect = 1.300e-87
Identity = 127/180 (70.56%), Postives = 141/180 (78.33%), Query Frame = 1
Query:    1 MTASANDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            M A+A DVLTFWR AG +KWF KD AFD  IR RFL+TYEAAA G LS WE TPEGA AL +VLDQFPRNMFR D R FAAD +A+AVA+RA+ARGFDQ I   ER FFYLPF HSE  ADQ RC AL R+ G+A  + WAELHADIIRRFGRFPHRN VLGR TT EE+A+L+  GFAG
Sbjct:    2 MIATAEDVLTFWRAAGEQKWFAKDDAFDAEIRRRFLQTYEAAAGGTLSDWEATPEGALALAIVLDQFPRNMFRGDARAFAADMMARAVADRALARGFDQQIPTNERLFFYLPFEHSETMADQDRCRALFRALGNADQLHWAELHADIIRRFGRFPHRNAVLGRVTTAEEKAYLEADGFAG 181          
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A4Q3FHY4_9HYPH (DUF924 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A4Q3FHY4_9HYPH)

HSP 1 Score: 260 bits (665), Expect = 2.140e-86
Identity = 120/177 (67.80%), Postives = 138/177 (77.97%), Query Frame = 1
Query:   10 SANDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            SAN V+TFWREAGPEKWF KD AFD  I  RFL  +EAAAAGQL+ WE+TPEG YAL+++LDQFPRNMFR  PR FA D LA  +AERAIARGFD+     E+ FFY+PF HSE  ADQ+RC+ LC +A  A  VK+AE+H DIIR FGRFPHRN VLGR TTP+E+AFL  GGFAG
Sbjct:    5 SANAVVTFWREAGPEKWFLKDEAFDAEITRRFLPAHEAAAAGQLAAWEETPEGVYALLILLDQFPRNMFRGSPRAFATDALAVEIAERAIARGFDEAYQPPEKRFFYMPFMHSEGLADQERCIELCDAADDADGVKYAEIHRDIIRDFGRFPHRNSVLGRDTTPQEKAFLQSGGFAG 181          
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A345ZY00_9HYPH (DUF924 domain-containing protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZY00_9HYPH)

HSP 1 Score: 258 bits (660), Expect = 1.280e-85
Identity = 120/182 (65.93%), Postives = 145/182 (79.67%), Query Frame = 1
Query:    1 MTA--SANDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            MTA  SA D++TFWREAG ++WF K+A FD  IR RFL  +EAAAAGQ++ WE T EGA AL+++LDQFPRNMFR+  R FA DPLA+ +A  A+ RGFD  +    R FFYLPF HSED ADQ+RC+AL ++AG A N+KWAELHADIIRRFGRFPHRN +LGR++TPEEQAFL+ GGFAG
Sbjct:    1 MTAEFSAADIVTFWREAGRDRWFNKNADFDAEIRQRFLTAHEAAAAGQVTAWETTAEGALALLILLDQFPRNMFRDSSRAFATDPLARTIAAGALVRGFDSHVPADMRTFFYLPFEHSEDLADQERCIALYKAAGDADNLKWAELHADIIRRFGRFPHRNVLLGRASTPEEQAFLESGGFAG 182          
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A363TR33_9BRAD (DUF924 domain-containing protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TR33_9BRAD)

HSP 1 Score: 256 bits (654), Expect = 1.240e-84
Identity = 120/178 (67.42%), Postives = 140/178 (78.65%), Query Frame = 1
Query:    7 ASANDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            A   D+++FWREAG  KWF KD AFD  IR RFL T+EAAAAG+L+ WE  PEGA AL+L LDQFPRN+FR D R +A DP A+AVA RA+ RGFD+ ++   R FFYLPF HSED ADQ+RCVAL R+AG A  +KWAE HADI+RRFGRFPHRN +LGR+TTPEEQAFLD GGF G
Sbjct:   10 ADPADLVSFWREAGHPKWFGKDDAFDAEIRRRFLATHEAAAAGRLAHWEAAPEGALALVLALDQFPRNLFRGDARIYATDPQARAVAVRALDRGFDREVEPALRAFFYLPFMHSEDLADQERCVALYRAAGDADGLKWAEHHADIVRRFGRFPHRNALLGRATTPEEQAFLDAGGFTG 187          
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A0Q6K9A1_9HYPH (Uncharacterized protein n=1 Tax=Bosea sp. Leaf344 TaxID=1736346 RepID=A0A0Q6K9A1_9HYPH)

HSP 1 Score: 254 bits (650), Expect = 4.120e-84
Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 1
Query:   16 NDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            +D++ FWR+AGPEKWF KD AFD +IR+RFL  +EAAAAG LS WE TPEG+YAL+L+LDQFPRN+FRN  + +A+D  A AVA+RAIARGFDQ   L ER FFY P  H+ED A Q+RC+ALC ++G A  V +A +H DIIR FGRFPHRN VLGR TTPEEQAFLD GGF+G
Sbjct:    7 DDIIRFWRDAGPEKWFAKDEAFDAAIRSRFLADHEAAAAGALSAWEATPEGSYALLLLLDQFPRNLFRNSAQAYASDEAALAVADRAIARGFDQAFPLPERRFFYTPHMHAEDLAQQERCIALCAASGDAEGVTYAVIHRDIIRDFGRFPHRNTVLGRETTPEEQAFLDAGGFSG 181          
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A0Q3KZP4_9HYPH (Uncharacterized conserved protein, DUF924 family n=1 Tax=Bosea thiooxidans TaxID=53254 RepID=A0A0Q3KZP4_9HYPH)

HSP 1 Score: 254 bits (649), Expect = 5.850e-84
Identity = 116/177 (65.54%), Postives = 136/177 (76.84%), Query Frame = 1
Query:   10 SANDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            SA D++ FWREAGPEKWF KD AFD  I  RFL  +E AAAG+L  WE+TPEGAYAL+++LDQFPRNMFR+ PR FA D  A A+AERAIARGFD      E+ FFY+PF HSE+  DQ+RC+ALC +A     VK+AE+H DIIR FGRFPHRN VLGR TTP E++FL GGGFAG
Sbjct:    5 SAADIVAFWREAGPEKWFAKDTAFDAEITRRFLPAHEGAAAGKLGDWEKTPEGAYALLILLDQFPRNMFRDSPRAFATDAQALAIAERAIARGFDDAYGAPEKRFFYMPFMHSEELHDQERCIALCAAAADPEGVKYAEIHRDIIRDFGRFPHRNPVLGRDTTPAEESFLAGGGFAG 181          
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A4V2U4A9_9HYPH (Uncharacterized protein (DUF924 family) n=1 Tax=Bosea sp. BK604 TaxID=2512180 RepID=A0A4V2U4A9_9HYPH)

HSP 1 Score: 252 bits (643), Expect = 4.790e-83
Identity = 115/174 (66.09%), Postives = 136/174 (78.16%), Query Frame = 1
Query:   19 DVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            D+L+FWREAGPEKWF+KD  FD  IR RFL TY AAAAGQLS WE TP+G+YAL+++LDQFPRNMFR   + FAADPLA A+A+RA+ARGFD+G    ER FFYLPF H+ED A Q+RCVAL  ++G   + KWA +H DIIR FGRFPHRN VLGR +T  E AFL+ GGF G
Sbjct:    8 DILSFWREAGPEKWFEKDETFDAEIRARFLATYNAAAAGQLSDWEATPDGSYALLILLDQFPRNMFRGSAQAFAADPLALAIADRAVARGFDEGYANPERRFFYLPFEHAEDLAHQERCVALTHASGDEDSTKWAIVHRDIIRDFGRFPHRNAVLGRDSTEAEHAFLEKGGFNG 181          
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A2W6YEX1_9HYPH (DUF924 domain-containing protein n=1 Tax=Chelatococcus sp. TaxID=1953771 RepID=A0A2W6YEX1_9HYPH)

HSP 1 Score: 250 bits (638), Expect = 2.760e-82
Identity = 113/178 (63.48%), Postives = 138/178 (77.53%), Query Frame = 1
Query:    7 ASANDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            A A D++ FWR+AGPE+WF KD AFD  IR RFL T+EAAA G+L+ WE+TPEGAYAL+++LDQFPRN+FR   R FA D +A AVAERAIARGFD+  +  E  FFY+PF HSE+ A Q+RC+ALC     A  V++AE+H DIIR FGRFPHRN +LGR T+P EQAFLD GGF+G
Sbjct:    4 ADAADIVAFWRQAGPERWFAKDDAFDAEIRRRFLATHEAAATGELASWEETPEGAYALLILLDQFPRNLFRGSDRAFATDAMAVAVAERAIARGFDRAYEPPESRFFYMPFMHSEELAHQERCIALCAGRDDAEGVRYAEIHRDIIRDFGRFPHRNPMLGRDTSPAEQAFLDEGGFSG 181          
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Match: A0A5C1B6C6_9HYPH (DUF924 domain-containing protein n=1 Tax=Bosea sp. F3-2 TaxID=2599640 RepID=A0A5C1B6C6_9HYPH)

HSP 1 Score: 250 bits (638), Expect = 2.760e-82
Identity = 116/177 (65.54%), Postives = 136/177 (76.84%), Query Frame = 1
Query:   10 SANDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGWEQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQGIDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRRFGRFPHRNKVLGRSTTPEEQAFLDGGGFAG 540
            SA D++TFWREAGPEKWF ++ AFD  I  RF   +EAAAAG+LS WE TPEG YAL+++LDQFPRNMFRN PR FA D  A AVAERAI RGFD   +  E+ FFY+PF HSE+ A Q+RC+ALC +A  A  VK+AE+H DIIR FGRFPHRN VLGR TT  E+AFLD GGF+G
Sbjct:    5 SAADIVTFWREAGPEKWFARNEAFDAEIIRRFQPVHEAAAAGKLSAWEATPEGVYALLILLDQFPRNMFRNSPRAFATDAQALAVAERAIGRGFDDAYEAPEKRFFYMPFMHSEELAHQERCIALCAAAEDAEGVKYAEIHRDIIRDFGRFPHRNPVLGRDTTAPERAFLDEGGFSG 181          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17661.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127F245_9HYPH3.230e-9071.67Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2... [more]
A0A6N7GTI8_9HYPH1.300e-8770.56DUF924 family protein n=1 Tax=Hyphomicrobiales bac... [more]
A0A4Q3FHY4_9HYPH2.140e-8667.80DUF924 domain-containing protein n=1 Tax=Hyphomicr... [more]
A0A345ZY00_9HYPH1.280e-8565.93DUF924 domain-containing protein n=1 Tax=Pseudolab... [more]
A0A363TR33_9BRAD1.240e-8467.42DUF924 domain-containing protein n=1 Tax=Bradyrhiz... [more]
A0A0Q6K9A1_9HYPH4.120e-8466.29Uncharacterized protein n=1 Tax=Bosea sp. Leaf344 ... [more]
A0A0Q3KZP4_9HYPH5.850e-8465.54Uncharacterized conserved protein, DUF924 family n... [more]
A0A4V2U4A9_9HYPH4.790e-8366.09Uncharacterized protein (DUF924 family) n=1 Tax=Bo... [more]
A0A2W6YEX1_9HYPH2.760e-8263.48DUF924 domain-containing protein n=1 Tax=Chelatoco... [more]
A0A5C1B6C6_9HYPH2.760e-8265.54DUF924 domain-containing protein n=1 Tax=Bosea sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17661contigP-wetherbeei_contig17661:406..948 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1168059.KB899087_gene2694
PFAMsDUF924
Model size543
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.54e-84
EggNOG OGsCOG3803@1|root,COG3803@2|Bacteria,1RHYI@1224|Proteobacteria,2U7AN@28211|Alphaproteobacteria,3EZQ9@335928|Xanthobacteraceae
DescriptionBacterial protein of unknown function (DUF924)
Cds size543
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186122.5255601-CDS-P-wetherbeei_contig17661:405..9481683186122.5255601-CDS-P-wetherbeei_contig17661:405..948Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17661 406..948 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17661.1.1prot_P-wetherbeei_contig17661.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17661 406..948 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17661.1.1

>prot_P-wetherbeei_contig17661.1.1 ID=prot_P-wetherbeei_contig17661.1.1|Name=mRNA_P-wetherbeei_contig17661.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp
MTASANDVLTFWREAGPEKWFKKDAAFDESIRTRFLETYEAAAAGQLSGW
EQTPEGAYALILVLDQFPRNMFRNDPRTFAADPLAKAVAERAIARGFDQG
IDLGERNFFYLPFTHSEDPADQKRCVALCRSAGHAGNVKWAELHADIIRR
FGRFPHRNKVLGRSTTPEEQAFLDGGGFAG*
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mRNA from alignment at P-wetherbeei_contig17661:406..948-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17661.1.1 ID=mRNA_P-wetherbeei_contig17661.1.1|Name=mRNA_P-wetherbeei_contig17661.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig17661:406..948- (Phaeothamnion wetherbeei SAG_119_79)
ATGACTGCTTCCGCGAATGATGTGCTGACCTTCTGGCGCGAGGCCGGACC CGAGAAATGGTTCAAGAAGGACGCGGCGTTCGACGAATCCATCCGCACCC GCTTTCTCGAGACCTATGAGGCCGCCGCCGCCGGACAACTCTCCGGCTGG GAGCAAACGCCGGAAGGCGCCTACGCGCTGATCCTCGTGCTCGATCAATT CCCCCGCAACATGTTCCGCAACGATCCGCGCACCTTCGCCGCCGATCCGC TCGCGAAGGCTGTGGCCGAGCGCGCCATCGCGCGCGGATTCGATCAAGGC ATCGATCTGGGAGAGCGCAATTTCTTCTATCTGCCGTTCACGCATTCCGA AGATCCGGCCGATCAGAAACGCTGCGTCGCGCTCTGCCGCTCCGCGGGCC ACGCCGGCAATGTCAAATGGGCGGAGCTTCACGCCGACATCATCCGGCGC TTCGGCCGCTTCCCTCATCGCAACAAGGTGCTCGGCCGCTCCACCACGCC GGAGGAGCAAGCCTTCCTCGACGGCGGCGGCTTCGCTGGATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17661:406..948-

>mRNA_P-wetherbeei_contig17661.1.1 ID=mRNA_P-wetherbeei_contig17661.1.1|Name=mRNA_P-wetherbeei_contig17661.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig17661:406..948- (Phaeothamnion wetherbeei SAG_119_79)
ATGACTGCTTCCGCGAATGATGTGCTGACCTTCTGGCGCGAGGCCGGACC
CGAGAAATGGTTCAAGAAGGACGCGGCGTTCGACGAATCCATCCGCACCC
GCTTTCTCGAGACCTATGAGGCCGCCGCCGCCGGACAACTCTCCGGCTGG
GAGCAAACGCCGGAAGGCGCCTACGCGCTGATCCTCGTGCTCGATCAATT
CCCCCGCAACATGTTCCGCAACGATCCGCGCACCTTCGCCGCCGATCCGC
TCGCGAAGGCTGTGGCCGAGCGCGCCATCGCGCGCGGATTCGATCAAGGC
ATCGATCTGGGAGAGCGCAATTTCTTCTATCTGCCGTTCACGCATTCCGA
AGATCCGGCCGATCAGAAACGCTGCGTCGCGCTCTGCCGCTCCGCGGGCC
ACGCCGGCAATGTCAAATGGGCGGAGCTTCACGCCGACATCATCCGGCGC
TTCGGCCGCTTCCCTCATCGCAACAAGGTGCTCGGCCGCTCCACCACGCC
GGAGGAGCAAGCCTTCCTCGACGGCGGCGGCTTCGCTGGATAG
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