mRNA_P-wetherbeei_contig17640.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17640.1.1
Unique NamemRNA_P-wetherbeei_contig17640.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: UPI00148258CA (DNA polymerase IV n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI00148258CA)

HSP 1 Score: 308 bits (790), Expect = 4.650e-101
Identity = 168/257 (65.37%), Postives = 196/257 (76.26%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLFE 771
            IEPVSLDEAYLDLT  H  G+  AA+ALA+IA RVERE+GITVSIGLS NKFLAKLASE+ KPRG+SVIG  EA  +L  M + KINGVG  T ++L ASG+ +IG LQ +SE +LV+++GK GRRLA +A G D+RAVTP R  KSISAETTF  +T S  EL+A A  L ERVA QL RKG +GG +VLKLKT DFRL TR++RLPN TQRA VL  AA  LI  +ADGR FRLIG+GVD L PA  ADPP LF+
Sbjct:  131 IEPVSLDEAYLDLTEAHESGERAAAEALAVIALRVEREVGITVSIGLSCNKFLAKLASEMDKPRGFSVIGAAEAKAVLAPMSIRKINGVGQATAQRLEASGIASIGQLQALSEMQLVTQYGKFGRRLARYAQGEDERAVTPDRPTKSISAETTFSRDTGSADELIAVARRLGERVATQLQRKGLAGGAVVLKLKTSDFRLLTRSKRLPNATQRASVLAEAAEFLIRRDADGRRFRLIGVGVDDLRPATEADPPGLFD 387          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A6N6T3K4_9HYPH (DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T3K4_9HYPH)

HSP 1 Score: 297 bits (761), Expect = 1.450e-96
Identity = 167/256 (65.23%), Postives = 188/256 (73.44%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 768
            IEPVSLDEAYLDLT D+      AA+ALA IA RVEREIGITVSIGLS NKFLAKLASEL+KPRG+SVIGR EA   L  + V KI+GVGAVT R++  SGL T+  LQ +SE +LV+RFGK G RLA FAHG DDR VTP R  KSISAETTFR +T S AEL   A  L ERVA QL RKG +G ++ LKLKT DFR+ TR+R LP PTQR   +      LIE EADGR+FRLIG+GV  L  A AADP DLF
Sbjct:  131 IEPVSLDEAYLDLTDDYRTEAPPAAEALAHIAARVEREIGITVSIGLSCNKFLAKLASELEKPRGFSVIGRAEAKSFLAPLSVRKIHGVGAVTARRMEESGLTTVAHLQALSEQDLVARFGKFGHRLAQFAHGNDDRIVTPDRPVKSISAETTFRQDTGSPAELCDVARRLSERVAAQLVRKGVAGSSVTLKLKTSDFRVLTRSRSLPYPTQRQATIFQTVAALIEREADGRTFRLIGVGVSELGSAEAADPTDLF 386          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A537RU56_9PROT (DNA polymerase IV n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RU56_9PROT)

HSP 1 Score: 293 bits (749), Expect = 1.130e-94
Identity = 163/256 (63.67%), Postives = 193/256 (75.39%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 768
            +EP+SLDEAYLDLT D+      AA+ALA I+RR+E EIGITVSIGLS NKFLAKLASEL KPRG+SVIGR EA   L  + V KI+GVGAVT R++ ASGL TIGDLQ + + ELV+RFGK G+RLA FA G DDRAVT +R  KSISAE TF  +TAS   L   A  LC+RVA QLARKG +G ++VLKLKT DF + TR+RRL +PTQRA ++  +   LI+ EADGR+FRLIG+GV  L  A AADP DLF
Sbjct:  131 VEPLSLDEAYLDLTDDYRTEAPPAAEALATISRRIESEIGITVSIGLSWNKFLAKLASELHKPRGFSVIGRAEAKGFLAPLSVRKIHGVGAVTARRMEASGLKTIGDLQALKDQELVARFGKFGQRLALFAQGDDDRAVTSYRPVKSISAEITFGQDTASGGRLREIAQGLCDRVAAQLARKGVAGTSIVLKLKTSDFSILTRSRRLAHPTQRASLIFESIAALIDREADGRTFRLIGVGVADLGSATAADPADLF 386          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A2E3KYU5_9PROT (DNA polymerase IV n=2 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E3KYU5_9PROT)

HSP 1 Score: 291 bits (745), Expect = 5.810e-94
Identity = 160/258 (62.02%), Postives = 189/258 (73.26%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTAD-HLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLFE 771
            I+PVSLDEAYLDL+ D  + GD   A ALA  A R+E E+GITVSIGL+ NKFLAKLAS+L KPRGYSVIGR EA   L D+PV KINGVGAVT +K+   G+ TIG LQ MS+ ELV R+G+ GRRLA F  G D R V+  RAAKS+SAETTF T+    A+L     P+CERVA++L  KG +GGT+VLKLKT DF++ TRNR+L  PTQ+ D++   A  LIEAEADGR FRLIGIGV  L     ADPPDLFE
Sbjct:  152 IQPVSLDEAYLDLSRDVRVEGDXPPAVALARAALRIEAEVGITVSIGLAYNKFLAKLASDLDKPRGYSVIGREEALDFLSDLPVNKINGVGAVTAKKMAEHGIETIGQLQAMSDDELVGRYGRFGRRLAGFVRGEDRRKVSSGRAAKSVSAETTFVTDLRDAADLREQVRPMCERVADRLKAKGIAGGTVVLKLKTADFQILTRNRQLSQPTQKGDLIFEQAAVLIEAEADGRVFRLIGIGVTDLVSGAKADPPDLFE 409          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A2D6T213_9PROT (DNA polymerase IV n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T213_9PROT)

HSP 1 Score: 289 bits (740), Expect = 1.740e-93
Identity = 157/260 (60.38%), Postives = 190/260 (73.08%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLFEGKS 780
            IEPVSLDEAYLDL+AD       AA+ LA  A R+ER++ ITVSIGLS NKFLAKLAS+L+KPRG+S++GR EA   L  +PV KINGVG VT +K+   G+  I +LQ M E++LV+ FGK GRRLA +  G D+R VT HRAAKSISAETTF  + A+  EL     PLCERVA +L R   +G TLVLKLKT DF++ TRNRRLP+PTQ+ADV+   A  LI  EADGR FRLIG+G+  L PA  ADPPDLF G++
Sbjct:  131 IEPVSLDEAYLDLSADVRSDPRPAARVLAETAMRIERDVNITVSIGLSYNKFLAKLASDLEKPRGFSLVGRAEARDFLAPLPVAKINGVGPVTAKKMADLGITEIRELQAMPESQLVTTFGKFGRRLAGYVQGVDERQVTSHRAAKSISAETTFAQDIAAAEELRRVIKPLCERVAGRLERNQVAGHTLVLKLKTADFQVLTRNRRLPHPTQQADVIYEHAADLIAREADGRYFRLIGVGLSDLCPAAEADPPDLFGGRA 390          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A3N5MV63_9HYPH (DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5MV63_9HYPH)

HSP 1 Score: 286 bits (733), Expect = 2.950e-92
Identity = 159/256 (62.11%), Postives = 192/256 (75.00%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 768
            IEP+SLDEAYLDLT D+      AA+ALA +A R+E E+GITVSIGLS NKFLAKLASEL+KPRG+SVIGR EA   L  + V KI+GVGAVT  ++ ASGL TI DLQ ++EA LV+RFGK G RLA +AHG DDR VTP++A KSISAETTF+ +TAS  EL   A  L ERVA QL RKG +G  +VLKLKT DFR+ +R+RRL +PTQ+A V+      LI+  ADGR+FRLIG+GV  +  A +ADP DLF
Sbjct:  139 IEPLSLDEAYLDLTDDYRTEAPPAAEALAQLAARIESEVGITVSIGLSCNKFLAKLASELEKPRGFSVIGRDEARDFLAPLSVRKIHGVGAVTAGQMEASGLRTIADLQALNEAVLVARFGKFGHRLALYAHGNDDRRVTPYQALKSISAETTFQHDTASAGELRDIAGRLSERVAGQLLRKGVAGSGIVLKLKTSDFRILSRSRRLSHPTQKAQVIYENVAALIDKAADGRTFRLIGVGVVDIEAAASADPLDLF 394          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A3S0GMR3_9HYPH (DNA polymerase IV n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0GMR3_9HYPH)

HSP 1 Score: 279 bits (714), Expect = 2.110e-89
Identity = 155/256 (60.55%), Postives = 183/256 (71.48%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 768
            IEPVSLDEAYLDL  +H L    AA+ALA IARRVERE+GITVSIGL+ANKF+AKLASEL+KP G+SVIG  EA   L  + V KI+GVG+ T +++  +G  TIGDLQ +    LV+R+GK G RLA F  G D R VTP R  KSISAETTFR +T+   ELL     L  RVA QLARKG + GT+VLKLKT DF++ TRNRRL +PTQ+A VL  +A  L+  E DGR FRL+GIG   L PA  ADP DLF
Sbjct:  131 IEPVSLDEAYLDLADEHRLRGTCAAEALAEIARRVEREVGITVSIGLAANKFMAKLASELRKPAGFSVIGEAEAIAFLAPLSVRKIHGVGSATAKRMEEAGFNTIGDLQALPAQALVARYGKFGSRLAQFVRGEDSRTVTPDRPTKSISAETTFRRDTSRFDELLETGRGLATRVAAQLARKGLAAGTVVLKLKTADFKVVTRNRRLAHPTQKAAVLSESAEALLAREVDGRFFRLLGIGAADLRPAVEADPVDLF 386          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A849U1Q8_9HYPH (DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849U1Q8_9HYPH)

HSP 1 Score: 274 bits (700), Expect = 1.850e-87
Identity = 153/257 (59.53%), Postives = 187/257 (72.76%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLFE 771
            IEPVSLDEAYLDL+ +      TAA ALA IA RVERE+ ITVSIGL+ NKFLAKLAS+L KPRG++VIG  EA   L  MPV KI+GVGAVT  ++ A GL TI DLQ  SEAELV  FG  GRRLA+++ G+D+R VTP R  KSISAE TF  NTA+  EL A   P+C R+ +QL RK  SG T+V+KLKT DF+L +R+ RL +PTQ+++++  AA  LI  EADGR FRL+G+G+  LA A  ADPP LF+
Sbjct:  132 IEPVSLDEAYLDLSEEQRYEGPTAASALAHIALRVEREVCITVSIGLAPNKFLAKLASDLDKPRGFAVIGATEAATTLAAMPVKKIHGVGAVTAERMEALGLNTIADLQGRSEAELVGLFGSFGRRLAAYSQGQDERRVTPSRETKSISAEDTFSRNTAASDELCAAIVPMCVRLGSQLVRKRLSGRTVVVKLKTHDFKLISRHARLQHPTQKSELIYDAASKLIAREADGRMFRLVGVGLTDLADAEQADPPGLFD 388          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: A0A1M3LKT4_9PROT (DNA polymerase IV n=1 Tax=Magnetospirillum sp. 64-120 TaxID=1895778 RepID=A0A1M3LKT4_9PROT)

HSP 1 Score: 273 bits (698), Expect = 3.390e-87
Identity = 146/256 (57.03%), Postives = 183/256 (71.48%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 768
            IEP+SLDEAYLDL+ +H L D   A  LA +AR VER++GIT+SIGLS NKFLAK+AS+ +KPRG+SVIGR EA  +L  MPV  I GVGA T  ++  +G+ TIG LQ+M EAEL++RFGK GR L + A G+D R VTP R AKS+S ETTF  +     +L A   PL ++VA +LA+   +G T+V+KLKT DFR  TRN RL  PT+RAD++   A  L+E EADGR+FRLIG+GV  L P   ADPPDLF
Sbjct:  129 IEPLSLDEAYLDLSPEHRLVDRPPAILLARLARAVERQVGITISIGLSYNKFLAKMASDRQKPRGFSVIGRAEAVSMLAQMPVSAIWGVGAATASRMAEAGIDTIGQLQQMPEAELLARFGKFGRHLFAMARGQDSRPVTPDRPAKSVSNETTFARDIRGFDDLRAALVPLADKVAGRLAKADLAGHTVVMKLKTADFRSLTRNHRLAEPTRRADIIAGVATALLEKEADGRAFRLIGVGVTDLCPGGMADPPDLF 384          
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Match: V6F755_MAGGM (DNA polymerase IV n=3 Tax=Rhodospirillaceae TaxID=41295 RepID=V6F755_MAGGM)

HSP 1 Score: 273 bits (697), Expect = 4.800e-87
Identity = 143/256 (55.86%), Postives = 185/256 (72.27%), Query Frame = 1
Query:    1 IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSANKFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTASGLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISAETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRLSTRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAADPPDLF 768
            +EP+SLDEAYLDL+ +H L D  AA  LA +AR +ER++GIT+S+GLS NKFLAK+AS+  KPRG+SVIGR EA   L  +PV  I GVGA T  ++ A+G+ TI  LQ+M+EA+LV+RFGK GR L   A G D+R + P R AKS+S ETTFR +    A+LLA   PL E+VA +L + G +G T+VLK+K  DFR+ TRN RL  PT+RAD+++  A+ L+E EADGR+FRLIG+GV  L     ADPPDLF
Sbjct:  129 VEPLSLDEAYLDLSPEHRLSDRPAAVLLARLARAIERQVGITISVGLSYNKFLAKMASDRNKPRGFSVIGRAEAVGQLAGLPVAAIWGVGAATAARMEAAGITTISQLQKMAEADLVARFGKFGRHLFLMARGEDNRPIIPDRPAKSVSNETTFRHDMHRPADLLAALLPLAEKVAARLGKAGLAGHTVVLKMKASDFRVLTRNHRLSEPTRRADIIMRTAQSLLEREADGRAFRLIGVGVADLCSGDNADPPDLF 384          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17640.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00148258CA4.650e-10165.37DNA polymerase IV n=1 Tax=Rhodomicrobium TaxID=106... [more]
A0A6N6T3K4_9HYPH1.450e-9665.23DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacter... [more]
A0A537RU56_9PROT1.130e-9463.67DNA polymerase IV n=1 Tax=Alphaproteobacteria bact... [more]
A0A2E3KYU5_9PROT5.810e-9462.02DNA polymerase IV n=2 Tax=Magnetovibrio sp. TaxID=... [more]
A0A2D6T213_9PROT1.740e-9360.38DNA polymerase IV n=1 Tax=Rhodospirillaceae bacter... [more]
A0A3N5MV63_9HYPH2.950e-9262.11DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacter... [more]
A0A3S0GMR3_9HYPH2.110e-8960.55DNA polymerase IV n=1 Tax=Hyphomicrobiales bacteri... [more]
A0A849U1Q8_9HYPH1.850e-8759.53DNA polymerase IV n=1 Tax=Hyphomicrobiaceae bacter... [more]
A0A1M3LKT4_9PROT3.390e-8757.03DNA polymerase IV n=1 Tax=Magnetospirillum sp. 64-... [more]
V6F755_MAGGM4.800e-8755.86DNA polymerase IV n=3 Tax=Rhodospirillaceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17640contigP-wetherbeei_contig17640:1..783 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1430440.MGMSRv2_4130
Preferred namedinB
PFAMsIMS,IMS_C
Model size783
Max annot lvl204441|Rhodospirillales
KEGG koko:K02346
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.87e-88
EggNOG OGsCOG0389@1|root,COG0389@2|Bacteria,1MUUH@1224|Proteobacteria,2TSJN@28211|Alphaproteobacteria,2JQNT@204441|Rhodospirillales
EC2.7.7.7
DescriptionPoorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
Cds size783
COG categoryL
BRITEko00000,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186122.0033731-CDS-P-wetherbeei_contig17640:0..7831683186122.0033731-CDS-P-wetherbeei_contig17640:0..783Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17640 1..783 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17640.1.1prot_P-wetherbeei_contig17640.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17640 1..783 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17640.1.1

>prot_P-wetherbeei_contig17640.1.1 ID=prot_P-wetherbeei_contig17640.1.1|Name=mRNA_P-wetherbeei_contig17640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
IEPVSLDEAYLDLTADHLLGDETAAQALALIARRVEREIGITVSIGLSAN
KFLAKLASELKKPRGYSVIGRGEATRLLHDMPVGKINGVGAVTGRKLTAS
GLLTIGDLQRMSEAELVSRFGKLGRRLASFAHGRDDRAVTPHRAAKSISA
ETTFRTNTASCAELLAYAAPLCERVANQLARKGKSGGTLVLKLKTGDFRL
STRNRRLPNPTQRADVLLAAARPLIEAEADGRSFRLIGIGVDGLAPAFAA
DPPDLFEGKS*
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mRNA from alignment at P-wetherbeei_contig17640:1..783+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17640.1.1 ID=mRNA_P-wetherbeei_contig17640.1.1|Name=mRNA_P-wetherbeei_contig17640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig17640:1..783+ (Phaeothamnion wetherbeei SAG_119_79)
ATCGAGCCCGTCTCGCTGGACGAAGCCTATCTCGACCTCACGGCAGATCA CCTGCTCGGGGACGAGACCGCGGCGCAAGCGCTGGCGCTGATCGCGCGGC GTGTCGAGCGCGAGATCGGCATCACCGTCTCGATTGGACTATCGGCCAAC AAATTCCTGGCCAAGCTGGCGTCCGAGTTGAAAAAGCCGCGCGGCTACTC GGTGATCGGCCGTGGCGAGGCCACTCGGCTGCTGCATGATATGCCCGTCG GCAAGATCAATGGCGTGGGCGCCGTCACCGGGCGCAAACTGACAGCGAGC GGTCTGCTCACGATCGGCGACCTCCAGCGGATGAGCGAGGCGGAACTCGT GAGCCGGTTCGGCAAACTCGGCCGGCGGCTCGCCAGCTTTGCCCATGGAC GCGACGACCGCGCCGTTACCCCGCACCGCGCTGCCAAGAGCATCTCCGCC GAGACGACATTCCGCACCAACACCGCCTCCTGCGCGGAGTTGCTCGCCTA TGCCGCGCCGCTTTGCGAGCGCGTTGCCAACCAACTGGCGCGCAAGGGCA AGTCCGGCGGAACGCTGGTACTGAAACTCAAGACGGGCGATTTTCGCCTG TCGACGCGCAATCGCCGCCTGCCGAACCCAACGCAGCGCGCGGACGTGCT GCTGGCCGCTGCCCGGCCGCTGATCGAAGCCGAGGCGGACGGCCGCAGCT TTCGCCTGATCGGCATAGGTGTCGATGGCCTTGCACCAGCTTTCGCCGCC GATCCGCCCGATCTCTTCGAAGGAAAGTCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17640:1..783+

>mRNA_P-wetherbeei_contig17640.1.1 ID=mRNA_P-wetherbeei_contig17640.1.1|Name=mRNA_P-wetherbeei_contig17640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig17640:1..783+ (Phaeothamnion wetherbeei SAG_119_79)
ATCGAGCCCGTCTCGCTGGACGAAGCCTATCTCGACCTCACGGCAGATCA
CCTGCTCGGGGACGAGACCGCGGCGCAAGCGCTGGCGCTGATCGCGCGGC
GTGTCGAGCGCGAGATCGGCATCACCGTCTCGATTGGACTATCGGCCAAC
AAATTCCTGGCCAAGCTGGCGTCCGAGTTGAAAAAGCCGCGCGGCTACTC
GGTGATCGGCCGTGGCGAGGCCACTCGGCTGCTGCATGATATGCCCGTCG
GCAAGATCAATGGCGTGGGCGCCGTCACCGGGCGCAAACTGACAGCGAGC
GGTCTGCTCACGATCGGCGACCTCCAGCGGATGAGCGAGGCGGAACTCGT
GAGCCGGTTCGGCAAACTCGGCCGGCGGCTCGCCAGCTTTGCCCATGGAC
GCGACGACCGCGCCGTTACCCCGCACCGCGCTGCCAAGAGCATCTCCGCC
GAGACGACATTCCGCACCAACACCGCCTCCTGCGCGGAGTTGCTCGCCTA
TGCCGCGCCGCTTTGCGAGCGCGTTGCCAACCAACTGGCGCGCAAGGGCA
AGTCCGGCGGAACGCTGGTACTGAAACTCAAGACGGGCGATTTTCGCCTG
TCGACGCGCAATCGCCGCCTGCCGAACCCAACGCAGCGCGCGGACGTGCT
GCTGGCCGCTGCCCGGCCGCTGATCGAAGCCGAGGCGGACGGCCGCAGCT
TTCGCCTGATCGGCATAGGTGTCGATGGCCTTGCACCAGCTTTCGCCGCC
GATCCGCCCGATCTCTTCGAAGGAAAGTCCTGA
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