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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 3906 |
| Hectar predicted targeting category | signal anchor |
| Exons | 2 |
| Cds size | 3906 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186121.9134386-CDS-P-wetherbeei_contig1764:2..2444 | 1683186121.9134386-CDS-P-wetherbeei_contig1764:2..2444 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1764 3..2444 + |
| 1683186121.92389-CDS-P-wetherbeei_contig1764:2708..4172 | 1683186121.92389-CDS-P-wetherbeei_contig1764:2708..4172 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1764 2709..4172 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1764.3.1 >prot_P-wetherbeei_contig1764.3.1 ID=prot_P-wetherbeei_contig1764.3.1|Name=mRNA_P-wetherbeei_contig1764.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1302bp
PPRPFSSRCRLLALQPNNTQGLHSKQQKAVLRRLAIAEAMGPPVEMTMAG
AVVTMGLLVAGERAVPGLCLALMVFAIQALGSYAAMHTAAKRFSRVEKEL
VRGWSQAGLVGRLAFIGVAVFAAVVTRGLLGAAALALTGLAVQLYNEEER
KRIAADRARRVERGRSLRERTAAVEAAAAAQREEEEDEVRRSGRRREDGL
FNDDAHRMPPPAKRPPLDTRRMPPPLPRTSGRGSGGSGGGGWAASSSPPP
QQQQPQQRMYPSSQQQRTPSPAAPYSSGWYLSRGAARPVAAAAAVAGPGG
PRPMAEVEAVELPPRPPRLSCVGSAGKGATVPAANGYGGGAGRNRADASA
GGSGRGGANDRRLDISPSVRQRAGGAKRRAEAPADEEDGYGEGCGGDGDG
GVSASAGRTNGRAKRAHREEDGRGGGGDGRQIVAVPFVSRYPSIIGPKRV
LSPSSVSAFERLEDRKRPRGEIQSAAGGRGDGGDIENGDSGGFGTGDGGD
GEGGGGCEQVRRMKQARMEPPPTSVSQKRALTEEEAEDREGRRSGGDQAG
AQRGEGGDGGDSGTAGGDGDGRPVDKGKKPKYGRGTAFERGEAQRATGGI
AGGGAEEAKESWPAPPSSAGADRSTGPGVGGGAGAGGSTVARQAATPSAS
PVRAAAAAAPAVPGFNLGAVVAPAPAAAAAAAAPAAAAPLFGVPPPAQPP
SSAPTTSAPPAAAPATAASAAAPAVSGAPTPSHASAFTFGGLNGMAAGGG
GGGAPPTVSLPAAAGVFASASIEAAAASAAAAPASAAAPTPAAAPGMAAA
APVAPSTVLFNFGSGRVAKRQSDDSAAAPPTATGATGPPGGFTFSLPGVT
AGGASAAPAPASQSAFTFGGAGTAAVPAAAVAPSGGAAAAAGGGDASGGG
PAARQPFALGPTAKDVVGSGDGAVGGGTSLAPAPSFSFGATAPAPAAAVA
APAGGGAAPPPPFTFGAPAPAAAPATRALTSAASANGAFRVITPPGGAAA
PAPGGNAAPGGSGGGLFGFGGGTAAPAAAPPAPAAAPVPAFRFGGGAAAP
APAAAVPGGAGATGTPAPAFHFGAAAAPAPAAAAAGSLFTFGAPASTPAP
LTAAGGFGGFSGGAAFGAGAAPAPAATSAGPFGGGGGFGGAAPAPAPAAP
AGGFGGAGGFGASAFGGGAFGAGAPAPAPAAAPLFTGFGVAAPVAAPAAA
AGFGGTLPFGASAAAPAAPAGGMFGGGFAGAPTPGAVTAAAPGAGFAFGG
VPAASATPAAGAFSFGAPPAPAPGGIGPAFAFGAAPAPAPAAGGFSLGTG
AA back to topmRNA from alignment at P-wetherbeei_contig1764:3..4172+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1764.3.1 ID=mRNA_P-wetherbeei_contig1764.3.1|Name=mRNA_P-wetherbeei_contig1764.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4170bp|location=Sequence derived from alignment at P-wetherbeei_contig1764:3..4172+ (Phaeothamnion wetherbeei SAG_119_79)
CCTCCCCGCCCCTTTTCATCGCGCTGCCGTCTACTAGCCTTGCAGCCCAA
TAACACCCAAGGACTACATAGCAAGCAGCAAAAGGCCGTTTTGAGGCGCT
TGGCCATCGCCGAGGCCATGGGGCCGCCTGTGGAGATGACAATGGCGGGC
GCGGTGGTCACCATGGGGTTGCTAGTGGCTGGCGAGCGCGCTGTGCCGGG
CCTCTGCCTAGCCCTCATGGTTTTCGCGATACAGGCCCTGGGTTCCTATG
CCGCCATGCACACGGCGGCAAAGCGCTTCTCCCGCGTCGAGAAGGAGCTC
GTCCGGGGTTGGTCTCAAGCCGGCCTGGTCGGGCGGTTGGCCTTCATTGG
TGTGGCGGTCTTCGCGGCCGTCGTCACGCGCGGTCTTCTCGGTGCGGCGG
CTCTGGCGCTCACTGGCTTGGCCGTGCAACTGTACAACGAGGAAGAGCGA
AAACGGATTGCGGCGGACCGGGCGCGGCGCGTCGAGCGCGGCCGCAGCCT
GCGGGAGCGGACTGCTGCAGTTGAAGCCGCCGCCGCCGCGCAGCGCGAAG
AGGAGGAAGATGAGGTACGCCGCAGCGGCCGCCGCCGCGAGGACGGCCTG
TTCAACGACGATGCCCACCGGATGCCGCCGCCGGCGAAGCGCCCGCCGCT
CGACACGCGACGGATGCCGCCGCCGCTGCCGCGGACCAGCGGACGGGGCA
GCGGCGGCTCCGGCGGTGGAGGCTGGGCGGCATCTTCGAGCCCGCCGCCG
CAGCAGCAACAGCCACAGCAGCGCATGTATCCATCATCACAACAGCAGCG
AACGCCATCACCGGCGGCGCCCTACTCCTCGGGCTGGTACTTGTCGCGCG
GCGCCGCACGGCCGGTGGCAGCGGCGGCGGCGGTGGCCGGCCCCGGCGGG
CCTCGCCCGATGGCTGAGGTGGAGGCGGTGGAGCTGCCGCCGCGGCCGCC
ACGCCTCAGCTGCGTCGGCAGCGCCGGCAAAGGAGCCACCGTGCCAGCCG
CGAACGGCTATGGCGGCGGCGCCGGCCGCAATCGCGCCGACGCTTCGGCC
GGCGGCAGCGGCCGTGGCGGCGCCAACGACCGCCGCTTGGACATTTCGCC
GAGCGTCAGGCAGCGCGCGGGCGGAGCGAAGCGTCGCGCCGAAGCTCCCG
CAGATGAGGAGGACGGCTACGGTGAGGGCTGCGGCGGCGACGGCGACGGT
GGCGTTTCTGCTTCTGCCGGCAGAACCAATGGTCGGGCCAAGCGTGCCCA
CCGCGAAGAAGACGGCAGGGGAGGTGGCGGCGACGGTAGGCAGATCGTTG
CGGTGCCGTTCGTATCGCGCTACCCGTCAATCATCGGCCCGAAGAGAGTG
CTGAGCCCTTCGAGCGTCTCGGCATTCGAACGACTGGAAGACCGCAAGCG
GCCGCGCGGGGAAATCCAGTCTGCCGCCGGCGGCCGCGGCGACGGCGGCG
ATATCGAGAACGGCGACAGCGGCGGCTTCGGCACTGGCGATGGCGGCGAT
GGCGAAGGCGGCGGTGGCTGCGAGCAGGTCCGGCGGATGAAACAGGCCAG
GATGGAGCCGCCGCCGACGAGCGTCTCGCAGAAGCGCGCTCTGACGGAAG
AAGAAGCCGAGGATCGCGAGGGCCGCCGGAGCGGCGGCGACCAGGCCGGT
GCGCAGAGAGGCGAAGGGGGCGACGGGGGCGACAGCGGCACAGCGGGTGG
CGACGGGGACGGCCGCCCGGTCGATAAGGGGAAAAAGCCCAAGTACGGGC
GCGGCACGGCCTTTGAGCGGGGCGAAGCCCAGCGCGCAACGGGCGGCATC
GCCGGCGGCGGAGCCGAGGAGGCGAAAGAGTCGTGGCCGGCGCCGCCATC
ATCGGCAGGGGCTGACCGATCTACAGGCCCAGGCGTCGGCGGTGGCGCCG
GCGCTGGCGGCAGCACGGTTGCCCGCCAGGCTGCCACCCCGTCGGCATCG
CCGGTCCGTGCGGCAGCGGCGGCAGCTCCCGCTGTGCCAGGGTTCAACCT
TGGCGCCGTCGTGGCTCCAGCCCCGGCGGCGGCGGCGGCGGCAGCTGCGC
CGGCTGCGGCAGCGCCGCTGTTCGGTGTACCTCCGCCGGCGCAACCGCCG
AGCTCTGCACCGACGACTTCGGCGCCGCCGGCTGCCGCGCCTGCGACCGC
CGCTTCGGCAGCTGCGCCAGCCGTCTCTGGCGCTCCGACGCCGTCGCATG
CCAGCGCGTTCACCTTCGGCGGGCTGAACGGCATGGCAGCGGGCGGCGGC
GGCGGCGGGGCACCTCCAACCGTTTCGCTGCCGGCGGCCGCCGGAGTCTT
TGCCTCTGCGTCGATCGAGGCAGCAGCGGCGTCAGCGGCGGCGGCGCCTG
CGTCTGCAGCGGCTCCGACACCCGCGGCGGCGCCCGGGATGGCGGCAGCG
GCTCCTGTTGCGCCATCGACCGTATTGTTCAACTTTGGCAGCGTCCCAGT
GAGCCGTGACATGACGGGAGCGGGGCCATCCGGCGGTGCACCCGGCGGCG
GCGGCGGCGGCGCGGCGGCGGGAGCGCCTGCCCCGGCCTTCACCTTTGGC
GGCGCGCCGACGGCGGCAGACTGCGACATTAGCTCGGCGTTGGTGCCCGC
ACCTCGGACCAGCGCCCCGCTGGCGCCCCCTCAGCCCGGCGCCATGTTCT
CCTTTAGCGGCGACGGCGGCGGCGGCATCGCGAATGGCGTGGCGGCCTCG
ACCGAGGGACGGGTCGCCAAACGGCAATCGGACGACTCGGCTGCAGCGCC
GCCGACGGCAACGGGCGCGACAGGACCGCCCGGCGGGTTCACCTTTTCCC
TGCCGGGCGTGACCGCCGGCGGCGCCAGTGCGGCTCCGGCACCGGCGTCG
CAGTCCGCCTTCACGTTCGGCGGCGCAGGTACGGCCGCCGTGCCAGCGGC
GGCGGTTGCACCGTCCGGTGGGGCAGCGGCTGCCGCCGGTGGCGGCGACG
CGAGTGGCGGGGGCCCCGCAGCGCGTCAGCCGTTTGCGCTCGGGCCGACG
GCCAAAGACGTTGTGGGCAGCGGCGATGGGGCGGTAGGTGGCGGCACGTC
GTTGGCACCCGCCCCATCGTTCTCGTTCGGTGCCACCGCGCCTGCGCCGG
CTGCTGCTGTGGCGGCGCCGGCCGGCGGTGGGGCAGCGCCACCTCCGCCG
TTCACTTTCGGCGCTCCTGCCCCAGCCGCCGCACCTGCCACAAGGGCTCT
GACCTCTGCGGCGTCCGCAAATGGCGCGTTCCGCGTCATCACGCCTCCCG
GCGGTGCCGCAGCGCCCGCCCCGGGCGGCAATGCAGCGCCAGGTGGTAGT
GGCGGTGGCCTTTTTGGCTTTGGCGGCGGCACCGCTGCTCCGGCGGCTGC
GCCTCCTGCCCCAGCTGCCGCGCCCGTCCCAGCCTTCCGCTTCGGCGGCG
GCGCTGCCGCCCCGGCGCCTGCCGCCGCCGTGCCAGGCGGCGCCGGCGCG
ACAGGAACGCCGGCTCCGGCATTCCACTTCGGCGCGGCTGCAGCACCGGC
GCCTGCGGCTGCGGCTGCCGGCAGCCTCTTCACGTTCGGCGCACCGGCGT
CGACGCCGGCTCCCCTGACGGCGGCTGGCGGGTTTGGCGGGTTCAGCGGC
GGCGCCGCCTTTGGGGCCGGGGCGGCGCCTGCTCCCGCCGCGACATCCGC
TGGCCCTTTTGGAGGCGGAGGCGGCTTCGGCGGTGCCGCGCCGGCGCCGG
CGCCGGCCGCGCCTGCGGGCGGTTTTGGTGGGGCCGGCGGCTTTGGGGCG
AGCGCTTTCGGCGGCGGTGCCTTTGGTGCCGGAGCTCCGGCCCCGGCACC
GGCTGCAGCCCCACTCTTCACCGGCTTTGGCGTTGCGGCCCCGGTGGCCG
CACCCGCTGCGGCGGCCGGCTTTGGGGGCACCCTGCCTTTCGGCGCCTCC
GCCGCCGCGCCGGCAGCCCCGGCCGGCGGCATGTTTGGCGGCGGCTTTGC
TGGTGCGCCGACGCCAGGCGCCGTGACCGCCGCCGCGCCTGGAGCGGGCT
TCGCGTTCGGAGGCGTGCCCGCCGCTTCAGCAACGCCGGCTGCCGGGGCG
TTCTCGTTCGGGGCGCCCCCGGCGCCGGCACCGGGTGGCATTGGTCCCGC
CTTTGCATTTGGGGCGGCGCCGGCGCCGGCGCCGGCCGCCGGCGGGTTCT
CGCTCGGGACCGGGGCGGCG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1764:3..4172+ >mRNA_P-wetherbeei_contig1764.3.1 ID=mRNA_P-wetherbeei_contig1764.3.1|Name=mRNA_P-wetherbeei_contig1764.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=3906bp|location=Sequence derived from alignment at P-wetherbeei_contig1764:3..4172+ (Phaeothamnion wetherbeei SAG_119_79)
CCTCCCCGCCCCTTTTCATCGCGCTGCCGTCTACTAGCCTTGCAGCCCAA
TAACACCCAAGGACTACATAGCAAGCAGCAAAAGGCCGTTTTGAGGCGCT
TGGCCATCGCCGAGGCCATGGGGCCGCCTGTGGAGATGACAATGGCGGGC
GCGGTGGTCACCATGGGGTTGCTAGTGGCTGGCGAGCGCGCTGTGCCGGG
CCTCTGCCTAGCCCTCATGGTTTTCGCGATACAGGCCCTGGGTTCCTATG
CCGCCATGCACACGGCGGCAAAGCGCTTCTCCCGCGTCGAGAAGGAGCTC
GTCCGGGGTTGGTCTCAAGCCGGCCTGGTCGGGCGGTTGGCCTTCATTGG
TGTGGCGGTCTTCGCGGCCGTCGTCACGCGCGGTCTTCTCGGTGCGGCGG
CTCTGGCGCTCACTGGCTTGGCCGTGCAACTGTACAACGAGGAAGAGCGA
AAACGGATTGCGGCGGACCGGGCGCGGCGCGTCGAGCGCGGCCGCAGCCT
GCGGGAGCGGACTGCTGCAGTTGAAGCCGCCGCCGCCGCGCAGCGCGAAG
AGGAGGAAGATGAGGTACGCCGCAGCGGCCGCCGCCGCGAGGACGGCCTG
TTCAACGACGATGCCCACCGGATGCCGCCGCCGGCGAAGCGCCCGCCGCT
CGACACGCGACGGATGCCGCCGCCGCTGCCGCGGACCAGCGGACGGGGCA
GCGGCGGCTCCGGCGGTGGAGGCTGGGCGGCATCTTCGAGCCCGCCGCCG
CAGCAGCAACAGCCACAGCAGCGCATGTATCCATCATCACAACAGCAGCG
AACGCCATCACCGGCGGCGCCCTACTCCTCGGGCTGGTACTTGTCGCGCG
GCGCCGCACGGCCGGTGGCAGCGGCGGCGGCGGTGGCCGGCCCCGGCGGG
CCTCGCCCGATGGCTGAGGTGGAGGCGGTGGAGCTGCCGCCGCGGCCGCC
ACGCCTCAGCTGCGTCGGCAGCGCCGGCAAAGGAGCCACCGTGCCAGCCG
CGAACGGCTATGGCGGCGGCGCCGGCCGCAATCGCGCCGACGCTTCGGCC
GGCGGCAGCGGCCGTGGCGGCGCCAACGACCGCCGCTTGGACATTTCGCC
GAGCGTCAGGCAGCGCGCGGGCGGAGCGAAGCGTCGCGCCGAAGCTCCCG
CAGATGAGGAGGACGGCTACGGTGAGGGCTGCGGCGGCGACGGCGACGGT
GGCGTTTCTGCTTCTGCCGGCAGAACCAATGGTCGGGCCAAGCGTGCCCA
CCGCGAAGAAGACGGCAGGGGAGGTGGCGGCGACGGTAGGCAGATCGTTG
CGGTGCCGTTCGTATCGCGCTACCCGTCAATCATCGGCCCGAAGAGAGTG
CTGAGCCCTTCGAGCGTCTCGGCATTCGAACGACTGGAAGACCGCAAGCG
GCCGCGCGGGGAAATCCAGTCTGCCGCCGGCGGCCGCGGCGACGGCGGCG
ATATCGAGAACGGCGACAGCGGCGGCTTCGGCACTGGCGATGGCGGCGAT
GGCGAAGGCGGCGGTGGCTGCGAGCAGGTCCGGCGGATGAAACAGGCCAG
GATGGAGCCGCCGCCGACGAGCGTCTCGCAGAAGCGCGCTCTGACGGAAG
AAGAAGCCGAGGATCGCGAGGGCCGCCGGAGCGGCGGCGACCAGGCCGGT
GCGCAGAGAGGCGAAGGGGGCGACGGGGGCGACAGCGGCACAGCGGGTGG
CGACGGGGACGGCCGCCCGGTCGATAAGGGGAAAAAGCCCAAGTACGGGC
GCGGCACGGCCTTTGAGCGGGGCGAAGCCCAGCGCGCAACGGGCGGCATC
GCCGGCGGCGGAGCCGAGGAGGCGAAAGAGTCGTGGCCGGCGCCGCCATC
ATCGGCAGGGGCTGACCGATCTACAGGCCCAGGCGTCGGCGGTGGCGCCG
GCGCTGGCGGCAGCACGGTTGCCCGCCAGGCTGCCACCCCGTCGGCATCG
CCGGTCCGTGCGGCAGCGGCGGCAGCTCCCGCTGTGCCAGGGTTCAACCT
TGGCGCCGTCGTGGCTCCAGCCCCGGCGGCGGCGGCGGCGGCAGCTGCGC
CGGCTGCGGCAGCGCCGCTGTTCGGTGTACCTCCGCCGGCGCAACCGCCG
AGCTCTGCACCGACGACTTCGGCGCCGCCGGCTGCCGCGCCTGCGACCGC
CGCTTCGGCAGCTGCGCCAGCCGTCTCTGGCGCTCCGACGCCGTCGCATG
CCAGCGCGTTCACCTTCGGCGGGCTGAACGGCATGGCAGCGGGCGGCGGC
GGCGGCGGGGCACCTCCAACCGTTTCGCTGCCGGCGGCCGCCGGAGTCTT
TGCCTCTGCGTCGATCGAGGCAGCAGCGGCGTCAGCGGCGGCGGCGCCTG
CGTCTGCAGCGGCTCCGACACCCGCGGCGGCGCCCGGGATGGCGGCAGCG
GCTCCTGTTGCGCCATCGACCGTATTGTTCAACTTTGGCAGCGGACGGGT
CGCCAAACGGCAATCGGACGACTCGGCTGCAGCGCCGCCGACGGCAACGG
GCGCGACAGGACCGCCCGGCGGGTTCACCTTTTCCCTGCCGGGCGTGACC
GCCGGCGGCGCCAGTGCGGCTCCGGCACCGGCGTCGCAGTCCGCCTTCAC
GTTCGGCGGCGCAGGTACGGCCGCCGTGCCAGCGGCGGCGGTTGCACCGT
CCGGTGGGGCAGCGGCTGCCGCCGGTGGCGGCGACGCGAGTGGCGGGGGC
CCCGCAGCGCGTCAGCCGTTTGCGCTCGGGCCGACGGCCAAAGACGTTGT
GGGCAGCGGCGATGGGGCGGTAGGTGGCGGCACGTCGTTGGCACCCGCCC
CATCGTTCTCGTTCGGTGCCACCGCGCCTGCGCCGGCTGCTGCTGTGGCG
GCGCCGGCCGGCGGTGGGGCAGCGCCACCTCCGCCGTTCACTTTCGGCGC
TCCTGCCCCAGCCGCCGCACCTGCCACAAGGGCTCTGACCTCTGCGGCGT
CCGCAAATGGCGCGTTCCGCGTCATCACGCCTCCCGGCGGTGCCGCAGCG
CCCGCCCCGGGCGGCAATGCAGCGCCAGGTGGTAGTGGCGGTGGCCTTTT
TGGCTTTGGCGGCGGCACCGCTGCTCCGGCGGCTGCGCCTCCTGCCCCAG
CTGCCGCGCCCGTCCCAGCCTTCCGCTTCGGCGGCGGCGCTGCCGCCCCG
GCGCCTGCCGCCGCCGTGCCAGGCGGCGCCGGCGCGACAGGAACGCCGGC
TCCGGCATTCCACTTCGGCGCGGCTGCAGCACCGGCGCCTGCGGCTGCGG
CTGCCGGCAGCCTCTTCACGTTCGGCGCACCGGCGTCGACGCCGGCTCCC
CTGACGGCGGCTGGCGGGTTTGGCGGGTTCAGCGGCGGCGCCGCCTTTGG
GGCCGGGGCGGCGCCTGCTCCCGCCGCGACATCCGCTGGCCCTTTTGGAG
GCGGAGGCGGCTTCGGCGGTGCCGCGCCGGCGCCGGCGCCGGCCGCGCCT
GCGGGCGGTTTTGGTGGGGCCGGCGGCTTTGGGGCGAGCGCTTTCGGCGG
CGGTGCCTTTGGTGCCGGAGCTCCGGCCCCGGCACCGGCTGCAGCCCCAC
TCTTCACCGGCTTTGGCGTTGCGGCCCCGGTGGCCGCACCCGCTGCGGCG
GCCGGCTTTGGGGGCACCCTGCCTTTCGGCGCCTCCGCCGCCGCGCCGGC
AGCCCCGGCCGGCGGCATGTTTGGCGGCGGCTTTGCTGGTGCGCCGACGC
CAGGCGCCGTGACCGCCGCCGCGCCTGGAGCGGGCTTCGCGTTCGGAGGC
GTGCCCGCCGCTTCAGCAACGCCGGCTGCCGGGGCGTTCTCGTTCGGGGC
GCCCCCGGCGCCGGCACCGGGTGGCATTGGTCCCGCCTTTGCATTTGGGG
CGGCGCCGGCGCCGGCGCCGGCCGCCGGCGGGTTCTCGCTCGGGACCGGG
GCGGCG back to top
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