mRNA_P-wetherbeei_contig17612.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17612.1.1
Unique NamemRNA_P-wetherbeei_contig17612.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: A0A2N2TWW3_9PROT (Branched-chain amino acid ABC transporter permease n=4 Tax=Betaproteobacteria TaxID=28216 RepID=A0A2N2TWW3_9PROT)

HSP 1 Score: 422 bits (1086), Expect = 2.240e-146
Identity = 210/300 (70.00%), Postives = 249/300 (83.00%), Query Frame = 1
Query:    7 NNKKILYGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEG-WVTVITGVIFVICVLLFRRGLVGEIAA 903
            N ++I YG+L    L AP V+YP+ +MK LCFALFA AFNLL+GYTGLLSFGHA+FLGTAGYV GH++K+WGFP E+G++    A+A LG+++GSLAIRR GIYFAMITLA +QM+YF++LQAPFTGGEDGLQ IPR  LLG++ L+DD+ +YYF  AI + GFW+I+RTIHSPFGQVLKAIRENEARA+SLGYDV KYKLLAFVLS  L+GLAGATK LVF+F TLTD HW  SGE VLMTLLGGMGT+ GP VGA  ++TLQN+LA   G  VTVI G IFVICVL FRRG+VGE+ A
Sbjct:    2 NRRRIGYGILLAIMLVAPTVIYPVLVMKVLCFALFACAFNLLIGYTGLLSFGHAVFLGTAGYVAGHSIKIWGFPPELGLIFAALAAAALGWVIGSLAIRRSGIYFAMITLALAQMMYFVFLQAPFTGGEDGLQGIPRGKLLGIIDLKDDLNLYYFVLAIFIFGFWIIHRTIHSPFGQVLKAIRENEARAISLGYDVAKYKLLAFVLSAGLAGLAGATKTLVFRFATLTDAHWHTSGEVVLMTLLGGMGTVFGPVVGAATIVTLQNELADKVGSLVTVIMGAIFVICVLAFRRGIVGELGA 301          
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: A0A011PTA7_ACCSB (Leucine/isoleucine/valine transporter permease subunit n=2 Tax=Candidatus Accumulibacter TaxID=327159 RepID=A0A011PTA7_ACCSB)

HSP 1 Score: 417 bits (1071), Expect = 4.280e-144
Identity = 215/297 (72.39%), Postives = 244/297 (82.15%), Query Frame = 1
Query:   25 YGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEG-WVTVITGVIFVICVLLFRRGLVGEIAARIK 912
            Y  L   G+A P  VYP+ +MK LCFALFA AFNLLLGYTGLLSFGHA F GTA YV G+A+K WGFPTE+G+LAG AASA LG+ VGSLAIRR GIYFAM+TLA +QM+YFI+LQAPFTGGEDGLQ IPR T+LGL+SL DD+ +YYF  AI V  FW+IYRTIHSPFG VL AIRENE RA+SLGYDV KYKLLAFVLS  LSGLAGATK LVFKF TLTD HW  SGE VLMT+LGGMGT+LGP VG+ +++TLQN+LA   G  VTVI GVIFV+CVL FRRG+VGE++A  K
Sbjct:    8 YLALLAVGIALPFFVYPVLVMKILCFALFACAFNLLLGYTGLLSFGHAAFFGTAAYVAGYAIKGWGFPTELGLLAGTAASALLGWAVGSLAIRRTGIYFAMVTLALAQMVYFIFLQAPFTGGEDGLQGIPRGTILGLISLSDDLNLYYFVLAIFVFAFWLIYRTIHSPFGHVLTAIRENEPRAISLGYDVAKYKLLAFVLSAGLSGLAGATKMLVFKFATLTDAHWHGSGEVVLMTILGGMGTVLGPVVGSSVIVTLQNELADKVGSLVTVIMGVIFVVCVLAFRRGIVGEVSALYK 304          
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: A0A1A8XQW3_9RHOO (Inner-membrane translocator n=1 Tax=Candidatus Propionivibrio aalborgensis TaxID=1860101 RepID=A0A1A8XQW3_9RHOO)

HSP 1 Score: 414 bits (1065), Expect = 3.380e-143
Identity = 216/303 (71.29%), Postives = 246/303 (81.19%), Query Frame = 1
Query:    7 NNKKILYGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEG-WVTVITGVIFVICVLLFRRGLVGEIAARIK 912
            N   I Y  L V G+  P  VYP+ +MK LCFALFA AFNLLLGYTGLLSFGHA F GTA YV G+A+K WGFP E+GILAG AASA LG++VGSLAIRR GIYFAM+TLA +QM+YF +LQAPFTGGEDGLQ +PR  LLGL+SL +D+ +YYF  AI V GF +IYRTIHSPFGQ+LKAIRENE RA+SLGYDV KYKLLAFVLS  L+GLAGATK LVFKF TLTD HW  SGE VLMT+LGGMGT+LGP VGA ++++LQN+LA   G  VTVI G IFVICVLLFRRG+VGEI+A  K
Sbjct:    2 NRTVIAYLALLVLGIVLPFFVYPVLVMKVLCFALFACAFNLLLGYTGLLSFGHAAFFGTAAYVAGYAIKGWGFPPELGILAGAAASALLGWVVGSLAIRRTGIYFAMVTLALAQMVYFFFLQAPFTGGEDGLQGVPRGKLLGLISLANDLNLYYFVLAIFVFGFCLIYRTIHSPFGQILKAIRENEPRAISLGYDVAKYKLLAFVLSAGLAGLAGATKMLVFKFATLTDAHWHSSGEVVLMTILGGMGTVLGPVVGATVIVSLQNELADKVGSLVTVIMGTIFVICVLLFRRGIVGEISALYK 304          
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: A0A1J5DQ54_9DELT (Branched-chain amino acid ABC transporter permease n=5 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1J5DQ54_9DELT)

HSP 1 Score: 412 bits (1060), Expect = 1.810e-142
Identity = 211/292 (72.26%), Postives = 242/292 (82.88%), Query Frame = 1
Query:   25 YGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEGWVTVITGVIFVICVLLFRRGLVGEIA 900
            +G+L V+G+AAP +VYP+F MK LC ALFA AFNLLLGYTGLLSFGHA FLGTAGYV GH VKV GF  E+GILAG AA+A LG++VGSLAIRR GIYFAMITLA +QM+YF++LQ PFTGGEDGLQ +PR  L G + L   + MYYF +AI + GFW+IYRTIHSPFGQVLKAIRENE RA+SLGYDV KYKL AFVLS ALSGLAGATK+LVF+  +LTDVHW  SGE VLMTLLGGMGT+ GP +GA +V++LQN  A +  WV VITG IFVICVL FRRG+VGEIA
Sbjct:   11 WGLLIVSGIAAPFLVYPVFAMKILCLALFACAFNLLLGYTGLLSFGHAAFLGTAGYVTGHTVKVLGFQPELGILAGTAAAAVLGYVVGSLAIRRSGIYFAMITLALAQMVYFMFLQMPFTGGEDGLQGVPRGKLFGRIDLMQPLYMYYFVFAIFLAGFWVIYRTIHSPFGQVLKAIRENEPRAISLGYDVGKYKLTAFVLSAALSGLAGATKSLVFQLASLTDVHWHTSGEVVLMTLLGGMGTVFGPVIGASVVVSLQNYGANIGEWVIVITGTIFVICVLAFRRGIVGEIA 302          
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: A0A2W5HD94_9RHOO (Branched-chain amino acid ABC transporter permease n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2W5HD94_9RHOO)

HSP 1 Score: 411 bits (1056), Expect = 2.260e-141
Identity = 210/293 (71.67%), Postives = 242/293 (82.59%), Query Frame = 1
Query:   25 YGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEGWVTVITGVIFVICVLLFRRGLVGEIAA 903
            + +L  AG  AP +VYP+F+MK LCFALFA AFNLLLGYTGLLSFGHA FLG AGY+ GH VKV GF  E+GILAG A +A LG+L GSLAIRR GIYFAMITLA +QM+YF+ LQ PFTGGEDGLQ +PR TLLG+V L   M MY+F  A+ + GFW+IYRTIHSPFGQVLKAIRENE RA+SLGYDVDK+KL+AFVLS ALSGLAG+TK LVF+  +LTDVHW MSGE VLMTL+GGMGT+ GP VGA +++TLQN  A L  WVTV+TG IFVICVLLFRRG+VGE+ A
Sbjct:   37 WALLVAAGFVAPFLVYPVFVMKVLCFALFACAFNLLLGYTGLLSFGHAAFLGWAGYMTGHTVKVMGFSPELGILAGTAFAALLGYLFGSLAIRRSGIYFAMITLALAQMMYFLALQFPFTGGEDGLQGVPRGTLLGIVDLSQMMNMYFFVLAVFLFGFWVIYRTIHSPFGQVLKAIRENEPRAISLGYDVDKFKLVAFVLSAALSGLAGSTKTLVFQLASLTDVHWHMSGEVVLMTLVGGMGTVFGPVVGAVVLVTLQNYGAELGEWVTVLTGTIFVICVLLFRRGIVGELEA 329          
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: Q5P3Q6_AROAE (Possible ABC transporter, permease protein n=4 Tax=Rhodocyclaceae TaxID=75787 RepID=Q5P3Q6_AROAE)

HSP 1 Score: 408 bits (1049), Expect = 9.150e-141
Identity = 209/302 (69.21%), Postives = 243/302 (80.46%), Query Frame = 1
Query:    7 NNKKILYGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEGWVTVITGVIFVICVLLFRRGLVGEIAARIK 912
              K I + +L V GL AP +VYP+ +MK LCF+LFA AFNLLLGYTGLLSFGHA FLG AGY CG+A+K  G   E+G+LAG A +A LGF+ GSLAIRR GIYFAM+TLA +Q++YF+ LQ PFTGGEDGLQ +PR  L GLV L   M MYYF  A+ +GGFW+I R IHSPFGQVLKAIRENE RA+SLGYDVD+YKLLAFVLS ALSGLAGATK LVF+  +LTDVHW MSGE VLMTLLGGMGT+ GP VGA +V++LQN  A L  WV+V+TGVIFVICVL FRRG+VGE+AA I+
Sbjct:    2 KGKHIGWIILLVLGLVAPFLVYPVLVMKILCFSLFACAFNLLLGYTGLLSFGHAAFLGWAGYTCGYAIKELGLSPELGLLAGTATAAALGFVFGSLAIRRSGIYFAMVTLALAQLMYFLALQFPFTGGEDGLQGVPRGYLFGLVDLSQTMNMYYFVLAVFLGGFWLIDRAIHSPFGQVLKAIRENEPRAISLGYDVDRYKLLAFVLSAALSGLAGATKTLVFQLASLTDVHWHMSGEIVLMTLLGGMGTVFGPVVGATVVVSLQNYGAELGQWVSVLTGVIFVICVLAFRRGIVGELAALIR 303          
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: A0A809R853_9PROT (Branched-chain amino acid ABC transporter permease n=1 Tax=Candidatus Desulfobacillus denitrificans TaxID=2608985 RepID=A0A809R853_9PROT)

HSP 1 Score: 408 bits (1049), Expect = 9.480e-141
Identity = 210/303 (69.31%), Postives = 243/303 (80.20%), Query Frame = 1
Query:    7 NNKKILYGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEG-WVTVITGVIFVICVLLFRRGLVGEIAARIK 912
            N + + YG+L   G+AAP +VYPI +MK LCFALFA AFNLL+GYTGLLSFGHA FLG AGYV GHA+KVW FP E+G+L G   SA LG++ G LAIRR GIYFAMITLA +QM+YFI+LQAPFTG EDGLQ +PR  LLG V L +D+ +YY    I +  FW+I+RTIHSPFGQVLKAIRENEARA+SLGYDV KYKLLAFVLS  L+GLAGATK LVF+F TLTD HW  SGE VLMTLLGGMGT+LGP VGA I++TLQ+QLA   G  VTVI G IFV+CVL+FRRG+VGE+ A  K
Sbjct:    2 NRQTLGYGLLLALGIAAPILVYPILVMKVLCFALFACAFNLLIGYTGLLSFGHAAFLGAAGYVAGHAIKVWEFPPELGLLLGTLTSAVLGWIFGVLAIRRAGIYFAMITLALAQMMYFIFLQAPFTGAEDGLQGVPRGKLLGFVDLSNDINLYYVVLTIFIFAFWLIHRTIHSPFGQVLKAIRENEARAISLGYDVAKYKLLAFVLSATLAGLAGATKMLVFRFATLTDAHWHTSGEVVLMTLLGGMGTVLGPVVGAGIIVTLQDQLADKVGSLVTVIMGAIFVVCVLVFRRGIVGELGALYK 304          
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: UPI0019536D3D (branched-chain amino acid ABC transporter permease n=1 Tax=Stenotrophomonas maltophilia TaxID=40324 RepID=UPI0019536D3D)

HSP 1 Score: 409 bits (1051), Expect = 1.170e-140
Identity = 209/302 (69.21%), Postives = 241/302 (79.80%), Query Frame = 1
Query:    1 MDNNKKIL-YGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEG-WVTVITGVIFVICVLLFRRGLVGEIA 900
            M  NK +L YG L   GL AP VVYP+  MK LCFALFA AFNLLLGYTGLLSFGHA+F G AGYV GHA+KVWGFPTE+G+LAG AASA LGF+ G LAIRR GIYFAMITLA +QM+YF++LQAPFTGGEDGLQ IPR  LLGL+ L DD T+YY   A+    FW+I+RTIHSPFGQ+LKAIRENEAR +SLGY+V++YKL+AFVLS  L+GLAGA KA+VF+F TL D  W  SGE VLMTL+GGMGT++GP +GA  V+TL N LA   G  +TVI GVIFV CVLLFRRG+ GE A
Sbjct:    1 MSMNKSVLGYGALLALGLVAPLVVYPVLGMKVLCFALFACAFNLLLGYTGLLSFGHAVFFGAAGYVAGHAIKVWGFPTEIGVLAGTAASALLGFVFGGLAIRRSGIYFAMITLALAQMMYFVFLQAPFTGGEDGLQGIPRGRLLGLIDLADDFTLYYVVLAVFAVAFWLIHRTIHSPFGQILKAIRENEARVVSLGYEVERYKLMAFVLSAGLAGLAGALKAVVFRFATLADAFWQTSGEVVLMTLVGGMGTVVGPVIGAATVVTLHNTLADKVGPLLTVIMGVIFVTCVLLFRRGIAGEFA 302          
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: A0A7I9VKY2_9DELT (Branched-chain amino acid ABC transporter permease n=1 Tax=Anaeromyxobacter sp. Red267 TaxID=2590199 RepID=A0A7I9VKY2_9DELT)

HSP 1 Score: 408 bits (1048), Expect = 1.980e-140
Identity = 206/296 (69.59%), Postives = 239/296 (80.74%), Query Frame = 1
Query:   25 YGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEGWVTVITGVIFVICVLLFRRGLVGEIAARIK 912
            + V+FVAGL  P  VYP+F+M  LC ALFASAFNLLLGY GLLSFGHA FLG AGY+C HAVK WG P EVG+L GV  SAGLG ++G LAIRR GIYFAMITL  +Q++YF+ +Q PFTGG+DGLQ +PR  LLGL+SLE    MYYF YA+ + GF+ IYR IHSPFG VL++IRENE RALSLGYDVD+YKL+AFVLS AL+GLAGATKALVF+ ETLTDVHW MSGE VLMTLLGGMGT++GP+VGA IV+ LQN L+    WVTVITG++FV+ VL FRRG VGE  A  K
Sbjct:   22 FAVMFVAGLVLPFFVYPVFVMNVLCMALFASAFNLLLGYCGLLSFGHAAFLGAAGYLCAHAVKDWGLPPEVGLLLGVLLSAGLGLVIGGLAIRRSGIYFAMITLGLAQVVYFLAVQLPFTGGDDGLQGVPRGKLLGLLSLEGRYAMYYFVYAVFLAGFFAIYRAIHSPFGHVLRSIRENEPRALSLGYDVDRYKLMAFVLSAALAGLAGATKALVFQSETLTDVHWHMSGEVVLMTLLGGMGTVMGPSVGALIVLVLQNYLSGFGSWVTVITGLVFVVGVLAFRRGFVGEAIALAK 317          
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Match: H0PWU5_9RHOO (Branched-chain amino acid ABC transporter system, permease protein n=1 Tax=Azoarcus sp. KH32C TaxID=748247 RepID=H0PWU5_9RHOO)

HSP 1 Score: 406 bits (1043), Expect = 7.480e-140
Identity = 212/302 (70.20%), Postives = 242/302 (80.13%), Query Frame = 1
Query:    7 NNKKILYGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGLLSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAIRRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLEDDMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDKYKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMGTILGPTVGAFIVITLQNQLAFLEGWVTVITGVIFVICVLLFRRGLVGEIAARIK 912
            N K + +  L   GL AP V+YP+ LMK LCFALFA AFNLLLGYTGLLSFGHA FLG+AGYVCG+AV+  G   E+GILAG A +A LGF+ GSLAIRR GIYFAMITLA +Q++YF+ LQ PFTGGEDG+Q IPR  LLG++ L D M MYYF  AI + GFW++ R IHSPFGQVLKAIRENE RA+SLGYDV+KYKLLAFVLS ALSGLAGATKALVF+  +LTDVHW MSGE VLMTLLGGMGT+ GP  GA IV+ LQN  A L  WVTV+TGVIFVICVL FRRG+ GE+A  I+
Sbjct:    2 NGKLVGWIALIAIGLVAPLVLYPVLLMKILCFALFACAFNLLLGYTGLLSFGHAAFLGSAGYVCGYAVQSLGLSPELGILAGTAVAAALGFVFGSLAIRRAGIYFAMITLALAQLVYFLALQFPFTGGEDGMQGIPRGRLLGMIDLGDTMNMYYFVLAIFLFGFWVVDRAIHSPFGQVLKAIRENEPRAVSLGYDVEKYKLLAFVLSAALSGLAGATKALVFQLASLTDVHWHMSGEIVLMTLLGGMGTVFGPIAGAAIVVGLQNYGAELGQWVTVLTGVIFVICVLAFRRGIFGELAVLIR 303          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17612.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N2TWW3_9PROT2.240e-14670.00Branched-chain amino acid ABC transporter permease... [more]
A0A011PTA7_ACCSB4.280e-14472.39Leucine/isoleucine/valine transporter permease sub... [more]
A0A1A8XQW3_9RHOO3.380e-14371.29Inner-membrane translocator n=1 Tax=Candidatus Pro... [more]
A0A1J5DQ54_9DELT1.810e-14272.26Branched-chain amino acid ABC transporter permease... [more]
A0A2W5HD94_9RHOO2.260e-14171.67Branched-chain amino acid ABC transporter permease... [more]
Q5P3Q6_AROAE9.150e-14169.21Possible ABC transporter, permease protein n=4 Tax... [more]
A0A809R853_9PROT9.480e-14169.31Branched-chain amino acid ABC transporter permease... [more]
UPI0019536D3D1.170e-14069.21branched-chain amino acid ABC transporter permease... [more]
A0A7I9VKY2_9DELT1.980e-14069.59Branched-chain amino acid ABC transporter permease... [more]
H0PWU5_9RHOO7.480e-14070.20Branched-chain amino acid ABC transporter system, ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17612contigP-wetherbeei_contig17612:404..1324 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1454004.AW11_00493
PFAMsBPD_transp_2
Model size921
Max annot lvl28216|Betaproteobacteria
KEGG koko:K01998
KEGG TC3.A.1.4
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237
Hectar predicted targeting categorysignal peptide
Exons1
Evalue7.01e-145
EggNOG OGsCOG4177@1|root,COG4177@2|Bacteria,1MWP3@1224|Proteobacteria,2VJA3@28216|Betaproteobacteria,1KQ4A@119066|unclassified Betaproteobacteria
DescriptionBranched-chain amino acid transport system / permease component
Cds size921
COG categoryU
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186121.3788486-CDS-P-wetherbeei_contig17612:403..13241683186121.3788486-CDS-P-wetherbeei_contig17612:403..1324Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17612 404..1324 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17612.1.1prot_P-wetherbeei_contig17612.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17612 404..1324 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17612.1.1

>prot_P-wetherbeei_contig17612.1.1 ID=prot_P-wetherbeei_contig17612.1.1|Name=mRNA_P-wetherbeei_contig17612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=307bp
MDNNKKILYGVLFVAGLAAPAVVYPIFLMKALCFALFASAFNLLLGYTGL
LSFGHAMFLGTAGYVCGHAVKVWGFPTEVGILAGVAASAGLGFLVGSLAI
RRQGIYFAMITLAFSQMLYFIYLQAPFTGGEDGLQAIPRQTLLGLVSLED
DMTMYYFTYAIVVGGFWMIYRTIHSPFGQVLKAIRENEARALSLGYDVDK
YKLLAFVLSCALSGLAGATKALVFKFETLTDVHWSMSGEAVLMTLLGGMG
TILGPTVGAFIVITLQNQLAFLEGWVTVITGVIFVICVLLFRRGLVGEIA
ARIKGQ*
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mRNA from alignment at P-wetherbeei_contig17612:404..1324-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17612.1.1 ID=mRNA_P-wetherbeei_contig17612.1.1|Name=mRNA_P-wetherbeei_contig17612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig17612:404..1324- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACAACAACAAGAAAATCCTCTACGGCGTGCTCTTCGTCGCCGGCCT CGCGGCCCCGGCGGTGGTCTACCCGATCTTCCTGATGAAGGCGCTGTGCT TCGCGCTTTTCGCCAGCGCCTTCAACCTGCTGCTGGGCTACACCGGGCTG CTCTCGTTCGGACACGCGATGTTCCTCGGGACGGCCGGCTACGTCTGCGG ACACGCGGTCAAGGTCTGGGGCTTCCCGACCGAGGTGGGGATCCTCGCCG GCGTCGCCGCGTCCGCCGGCCTGGGCTTCCTCGTCGGGTCGCTCGCGATC CGGCGCCAGGGGATCTACTTCGCGATGATCACGCTCGCGTTTTCCCAGAT GCTGTACTTCATCTACCTGCAGGCGCCGTTCACCGGCGGCGAGGACGGCC TGCAGGCGATCCCGCGCCAGACGCTGCTCGGCCTGGTCAGCCTCGAAGAC GACATGACGATGTACTACTTCACGTACGCCATCGTCGTCGGCGGGTTCTG GATGATCTACCGCACCATCCATTCGCCGTTCGGGCAGGTGCTCAAGGCGA TCCGCGAGAACGAGGCGCGCGCGCTGTCGCTCGGCTACGACGTGGACAAG TACAAGCTGCTGGCCTTCGTGCTCTCCTGCGCGCTGTCGGGTCTCGCCGG CGCGACCAAGGCGCTGGTGTTCAAGTTCGAGACGCTCACCGACGTGCACT GGTCGATGTCGGGCGAGGCCGTGCTGATGACGCTGCTCGGCGGCATGGGC ACCATCCTCGGGCCCACGGTGGGCGCGTTCATCGTGATCACGCTGCAGAA CCAGCTCGCCTTCCTCGAGGGCTGGGTGACGGTCATCACGGGCGTGATCT TCGTGATCTGCGTGCTGCTGTTCCGGCGCGGCTTGGTCGGCGAGATCGCG GCGCGGATCAAGGGGCAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17612:404..1324-

>mRNA_P-wetherbeei_contig17612.1.1 ID=mRNA_P-wetherbeei_contig17612.1.1|Name=mRNA_P-wetherbeei_contig17612.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig17612:404..1324- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACAACAACAAGAAAATCCTCTACGGCGTGCTCTTCGTCGCCGGCCT
CGCGGCCCCGGCGGTGGTCTACCCGATCTTCCTGATGAAGGCGCTGTGCT
TCGCGCTTTTCGCCAGCGCCTTCAACCTGCTGCTGGGCTACACCGGGCTG
CTCTCGTTCGGACACGCGATGTTCCTCGGGACGGCCGGCTACGTCTGCGG
ACACGCGGTCAAGGTCTGGGGCTTCCCGACCGAGGTGGGGATCCTCGCCG
GCGTCGCCGCGTCCGCCGGCCTGGGCTTCCTCGTCGGGTCGCTCGCGATC
CGGCGCCAGGGGATCTACTTCGCGATGATCACGCTCGCGTTTTCCCAGAT
GCTGTACTTCATCTACCTGCAGGCGCCGTTCACCGGCGGCGAGGACGGCC
TGCAGGCGATCCCGCGCCAGACGCTGCTCGGCCTGGTCAGCCTCGAAGAC
GACATGACGATGTACTACTTCACGTACGCCATCGTCGTCGGCGGGTTCTG
GATGATCTACCGCACCATCCATTCGCCGTTCGGGCAGGTGCTCAAGGCGA
TCCGCGAGAACGAGGCGCGCGCGCTGTCGCTCGGCTACGACGTGGACAAG
TACAAGCTGCTGGCCTTCGTGCTCTCCTGCGCGCTGTCGGGTCTCGCCGG
CGCGACCAAGGCGCTGGTGTTCAAGTTCGAGACGCTCACCGACGTGCACT
GGTCGATGTCGGGCGAGGCCGTGCTGATGACGCTGCTCGGCGGCATGGGC
ACCATCCTCGGGCCCACGGTGGGCGCGTTCATCGTGATCACGCTGCAGAA
CCAGCTCGCCTTCCTCGAGGGCTGGGTGACGGTCATCACGGGCGTGATCT
TCGTGATCTGCGTGCTGCTGTTCCGGCGCGGCTTGGTCGGCGAGATCGCG
GCGCGGATCAAGGGGCAGTGA
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