mRNA_P-wetherbeei_contig17597.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17597.2.1
Unique NamemRNA_P-wetherbeei_contig17597.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A6N7F2C3_9PROT (Oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F2C3_9PROT)

HSP 1 Score: 281 bits (719), Expect = 1.640e-93
Identity = 119/162 (73.46%), Postives = 141/162 (87.04%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAAKDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDDEE 486
            M K+N++IDVA CTNCNLCTLATMDEY+GN+W   AAPMP++GH WI+I  KERG VP +D+A+VP  CNHCDDA CV+ A++GAVT+REDGIV+IDP KAKGQKHLVDACPYGHIWWNEEL  PQAWPFDAHL+D GW++TRGAQSCPTAAM+V  ++D E
Sbjct:    1 MKKWNMVIDVAACTNCNLCTLATMDEYIGNDWSPYAAPMPKHGHKWIRIQQKERGSVPFIDMAYVPAMCNHCDDAPCVQKAENGAVTQREDGIVLIDPDKAKGQKHLVDACPYGHIWWNEELQTPQAWPFDAHLIDQGWKQTRGAQSCPTAAMKVYCLEDAE 162          
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A363TSF0_9BRAD (Oxidoreductase n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TSF0_9BRAD)

HSP 1 Score: 280 bits (717), Expect = 3.190e-93
Identity = 118/162 (72.84%), Postives = 140/162 (86.42%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAAKDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDDEE 486
            M+K+NLIIDVA CTNCNLCTLA MDEYVGN+WPGVAAPMP++GH W+ IL KERGQ  M+DVA++PT CNHCDDA C KAA+DGAV KR DGIV+I P +AKGQ+ LV+ACPYGH+WWNEEL LPQ WPFDAHL+D GW++TRG QSCPT AM+ V++ D+E
Sbjct:    1 MTKWNLIIDVAACTNCNLCTLAAMDEYVGNDWPGVAAPMPKHGHRWVDILQKERGQGTMIDVAYLPTLCNHCDDAPCAKAARDGAVEKRADGIVVIRPDRAKGQRQLVEACPYGHVWWNEELQLPQHWPFDAHLIDQGWQQTRGQQSCPTGAMRAVRLSDDE 162          
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A7C4TNK0_9HYPH (Oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TNK0_9HYPH)

HSP 1 Score: 280 bits (717), Expect = 3.290e-93
Identity = 117/162 (72.22%), Postives = 139/162 (85.80%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAAKDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDDEE 486
            M K+N+IIDVAECTNCNLCTLATMDEY+GN WPG +APMP++GH W+ IL KERGQ PM+D+A+VPT CNHCD+A C+KAA +G + KR DGIV+IDP KAKG++ LVDACPYGHIWWNEE+  PQAWPFDAHL+D GW +TRG QSCPT AM+ V I+DEE
Sbjct:    1 MKKWNMIIDVAECTNCNLCTLATMDEYIGNAWPGYSAPMPQHGHKWVNILQKERGQFPMIDIAYVPTMCNHCDEAPCIKAAGEGVIGKRTDGIVLIDPVKAKGRRDLVDACPYGHIWWNEEIQTPQAWPFDAHLIDQGWRQTRGQQSCPTGAMRAVCIEDEE 162          
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A1Q7BCE2_9PROT (Oxidoreductase n=4 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BCE2_9PROT)

HSP 1 Score: 278 bits (711), Expect = 2.600e-92
Identity = 119/162 (73.46%), Postives = 140/162 (86.42%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAAKDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDDEE 486
            M K+N+IIDVAECTNCNLCTLA MDEYVGN WPG +APMP++GH WI IL KERGQVPM+D+A+VPT CNHCD+  C+  A D AV KREDGIV+IDP+KA+G+K LV+ACPYGHIWWNEEL LPQ WPFDAHLLD GW++TRG QSCPT AM+ +K++DEE
Sbjct:    1 MQKWNMIIDVAECTNCNLCTLAVMDEYVGNAWPGYSAPMPKHGHKWINILQKERGQVPMIDIAYVPTMCNHCDNPPCMAKAGD-AVKKREDGIVLIDPEKARGRKDLVEACPYGHIWWNEELQLPQIWPFDAHLLDQGWQQTRGQQSCPTGAMRAIKVEDEE 161          
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A537TEV3_9PROT (Oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TEV3_9PROT)

HSP 1 Score: 277 bits (709), Expect = 5.240e-92
Identity = 120/162 (74.07%), Postives = 140/162 (86.42%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAAKDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDDEE 486
            M K+N+IIDVAECTNCNLCTLA MDEYVGN WPG +APMP++GH WI IL KERGQVPM+D+A+VPT CNHCD A C+  A D AV KREDGIV+IDP+KA+G+K LV+ACPYGHIWWNEEL LPQ WPFDAHLLD GW++TRG QSCPT AM+ VK++DE+
Sbjct:    1 MQKWNMIIDVAECTNCNLCTLAMMDEYVGNAWPGYSAPMPKHGHKWINILQKERGQVPMIDIAYVPTMCNHCDHAPCMVKAGD-AVKKREDGIVLIDPEKARGRKDLVEACPYGHIWWNEELQLPQIWPFDAHLLDQGWQQTRGQQSCPTGAMRAVKLEDED 161          
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A833LPT3_9HYPH (Oxidoreductase n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833LPT3_9HYPH)

HSP 1 Score: 274 bits (700), Expect = 1.300e-90
Identity = 116/160 (72.50%), Postives = 136/160 (85.00%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAAKDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDD 480
            M K+NLIIDVAECTNCNLCTLA MDEYVGN++PG +  MP++GH WI I  KERGQVPM+DVA+ PT CNHCDDA C+KA K GA+ KR+DGIV+IDP+KAKGQK LVDACPYGHIWWNEE  LPQAW FDAHL+D GW++TRG Q CPT AM+ ++I+D
Sbjct:    1 MKKWNLIIDVAECTNCNLCTLAAMDEYVGNDFPGYSVAMPKHGHRWIDIRQKERGQVPMIDVAYAPTMCNHCDDAPCIKADKSGAIRKRDDGIVLIDPEKAKGQKQLVDACPYGHIWWNEERQLPQAWTFDAHLIDQGWQQTRGQQVCPTGAMRAIRIED 160          
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A2E7QUA5_9PROT (Oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A2E7QUA5_9PROT)

HSP 1 Score: 271 bits (694), Expect = 1.060e-89
Identity = 118/161 (73.29%), Postives = 137/161 (85.09%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAA-KDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDD 480
            MSK+NLIIDVAECTNCN CTLATMDEYVGN+WPG +APMP++GH WI I  KERG+ P +D+A+VPT CNHCD   C++AA  DG+++KR DGIVIIDP+KAKG+K LVDACPYGHIWWNEEL LPQ W FDAHLLD GW++TRG QSCPT AM+ VK DD
Sbjct:    1 MSKWNLIIDVAECTNCNNCTLATMDEYVGNDWPGYSAPMPKHGHRWIDIKQKERGEAPFMDIAYVPTMCNHCDSGPCIEAAGDDGSISKRADGIVIIDPEKAKGRKDLVDACPYGHIWWNEELNLPQIWTFDAHLLDNGWQQTRGEQSCPTGAMKTVKQDD 161          
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A523G018_9PROT (Oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523G018_9PROT)

HSP 1 Score: 266 bits (681), Expect = 1.070e-87
Identity = 112/162 (69.14%), Postives = 139/162 (85.80%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAAKDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDDEE 486
            M K+NLIIDVAECTNCNLCTLAT DEYVGN+WPG+AA MP++GH WI I  KERGQ P+VDVA++P  C HCDDA C+KAA++GAVTKR+DGIVIIDP+K+ GQK +++ACPYG ++WNEEL +PQAWPFDAHLLDAGW++ R A +CPT A + +K++D E
Sbjct:    1 MKKWNLIIDVAECTNCNLCTLATQDEYVGNQWPGIAAEMPKHGHRWIDIKRKERGQPPLVDVAYLPVMCQHCDDAPCIKAAENGAVTKRDDGIVIIDPEKSVGQKQIMEACPYGVVFWNEELNIPQAWPFDAHLLDAGWDEPRAATACPTGAFRALKVEDSE 162          
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A6N7GZA2_9HYPH (Oxidoreductase (Fragment) n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GZA2_9HYPH)

HSP 1 Score: 264 bits (674), Expect = 2.020e-87
Identity = 114/162 (70.37%), Postives = 137/162 (84.57%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAAKDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDDEE 486
            M K+N+IIDVAECTNCNLCTLATMDEYVGN+WPG + PMP++GH WI IL KERGQVPM+D+A+VPT CN CD+A CV A   GAVTKR DGIV+IDP+++KG+K LVD CPYGHIWWNEE  +PQA+ FDAHL+D GW+ TRG QSCPT AM+ + ++DEE
Sbjct:    1 MKKWNMIIDVAECTNCNLCTLATMDEYVGNDWPGYSKPMPKHGHKWINILQKERGQVPMIDIAYVPTMCNQCDNAPCV-AKGGGAVTKRADGIVLIDPERSKGRKDLVDTCPYGHIWWNEEHQVPQAFNFDAHLIDQGWQHTRGHQSCPTGAMRAICVEDEE 161          
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Match: A0A6L5FGR4_9HYPH (Oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FGR4_9HYPH)

HSP 1 Score: 261 bits (667), Expect = 1.300e-85
Identity = 110/163 (67.48%), Postives = 132/163 (80.98%), Query Frame = 1
Query:    1 MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKILTKERGQVPMVDVAFVPTTCNHCDDAACVKAA-KDGAVTKREDGIVIIDPQKAKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPTAAMQVVKIDDEE 486
            M K+NL++DVAEC NC LC LA MDEYV NEWPG +APMPR+GH WI I  KERGQ PM+D+ F+PTTCNHCDDA C+KA   DGAV KR+DGI++IDP+K+KG+K + D+CPYG IWWNEE  +PQ W FDAHLLD GW  TRG Q CPTAAM+ +K++DEE
Sbjct:    1 MKKWNLVVDVAECINCQLCALAVMDEYVDNEWPGYSAPMPRHGHRWIDIKQKERGQAPMIDIGFLPTTCNHCDDAPCLKAGGPDGAVKKRDDGIILIDPEKSKGRKDIADSCPYGSIWWNEERQIPQIWTFDAHLLDQGWPHTRGHQVCPTAAMRSIKVEDEE 163          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17597.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7F2C3_9PROT1.640e-9373.46Oxidoreductase n=1 Tax=Alphaproteobacteria bacteri... [more]
A0A363TSF0_9BRAD3.190e-9372.84Oxidoreductase n=1 Tax=Bradyrhizobiaceae bacterium... [more]
A0A7C4TNK0_9HYPH3.290e-9372.22Oxidoreductase n=1 Tax=Hyphomicrobiales bacterium ... [more]
A0A1Q7BCE2_9PROT2.600e-9273.46Oxidoreductase n=4 Tax=unclassified Alphaproteobac... [more]
A0A537TEV3_9PROT5.240e-9274.07Oxidoreductase n=1 Tax=Alphaproteobacteria bacteri... [more]
A0A833LPT3_9HYPH1.300e-9072.50Oxidoreductase n=1 Tax=Pseudorhodoplanes sp. TaxID... [more]
A0A2E7QUA5_9PROT1.060e-8973.29Oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A2... [more]
A0A523G018_9PROT1.070e-8769.14Oxidoreductase n=1 Tax=Alphaproteobacteria bacteri... [more]
A0A6N7GZA2_9HYPH2.020e-8770.37Oxidoreductase (Fragment) n=1 Tax=Hyphomicrobiales... [more]
A0A6L5FGR4_9HYPH1.300e-8567.48Oxidoreductase n=1 Tax=Hyphomicrobiales bacterium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17597contigP-wetherbeei_contig17597:933..1418 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1244869.H261_19913
PFAMsCarboxypepD_reg,Fer4_11
Model size486
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.32e-81
EggNOG OGsCOG0437@1|root,COG0437@2|Bacteria,1R6XQ@1224|Proteobacteria
DescriptionPyrogallol hydroxytransferase
Cds size486
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186120.8125694-CDS-P-wetherbeei_contig17597:932..14181683186120.8125694-CDS-P-wetherbeei_contig17597:932..1418Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17597 933..1418 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17597.2.1prot_P-wetherbeei_contig17597.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17597 933..1418 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17597.2.1

>prot_P-wetherbeei_contig17597.2.1 ID=prot_P-wetherbeei_contig17597.2.1|Name=mRNA_P-wetherbeei_contig17597.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp
MSKYNLIIDVAECTNCNLCTLATMDEYVGNEWPGVAAPMPRNGHNWIKIL
TKERGQVPMVDVAFVPTTCNHCDDAACVKAAKDGAVTKREDGIVIIDPQK
AKGQKHLVDACPYGHIWWNEELALPQAWPFDAHLLDAGWEKTRGAQSCPT
AAMQVVKIDDEE
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mRNA from alignment at P-wetherbeei_contig17597:933..1418+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17597.2.1 ID=mRNA_P-wetherbeei_contig17597.2.1|Name=mRNA_P-wetherbeei_contig17597.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig17597:933..1418+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCAAATACAACCTCATCATCGACGTCGCCGAGTGCACCAACTGCAA CCTGTGCACGCTCGCCACGATGGACGAGTACGTCGGCAACGAATGGCCGG GGGTTGCCGCCCCGATGCCGCGCAACGGGCACAACTGGATCAAGATCCTG ACCAAGGAACGCGGCCAGGTGCCGATGGTCGATGTCGCGTTCGTGCCGAC GACCTGCAACCACTGCGACGACGCCGCTTGTGTCAAAGCCGCGAAGGACG GTGCTGTCACCAAGCGCGAGGACGGCATCGTCATCATCGATCCGCAAAAG GCCAAAGGCCAGAAGCACCTCGTCGATGCCTGTCCTTACGGCCACATCTG GTGGAACGAAGAACTGGCGTTGCCGCAGGCGTGGCCGTTTGATGCGCATC TGCTCGATGCCGGCTGGGAAAAGACGCGCGGCGCGCAGTCTTGCCCGACC GCTGCCATGCAAGTGGTCAAGATCGACGACGAGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17597:933..1418+

>mRNA_P-wetherbeei_contig17597.2.1 ID=mRNA_P-wetherbeei_contig17597.2.1|Name=mRNA_P-wetherbeei_contig17597.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig17597:933..1418+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCAAATACAACCTCATCATCGACGTCGCCGAGTGCACCAACTGCAA
CCTGTGCACGCTCGCCACGATGGACGAGTACGTCGGCAACGAATGGCCGG
GGGTTGCCGCCCCGATGCCGCGCAACGGGCACAACTGGATCAAGATCCTG
ACCAAGGAACGCGGCCAGGTGCCGATGGTCGATGTCGCGTTCGTGCCGAC
GACCTGCAACCACTGCGACGACGCCGCTTGTGTCAAAGCCGCGAAGGACG
GTGCTGTCACCAAGCGCGAGGACGGCATCGTCATCATCGATCCGCAAAAG
GCCAAAGGCCAGAAGCACCTCGTCGATGCCTGTCCTTACGGCCACATCTG
GTGGAACGAAGAACTGGCGTTGCCGCAGGCGTGGCCGTTTGATGCGCATC
TGCTCGATGCCGGCTGGGAAAAGACGCGCGGCGCGCAGTCTTGCCCGACC
GCTGCCATGCAAGTGGTCAAGATCGACGACGAGGAG
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