mRNA_P-wetherbeei_contig17588.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17588.1.1
Unique NamemRNA_P-wetherbeei_contig17588.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A2W4M8F6_9PROT (Efflux transporter periplasmic adaptor subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4M8F6_9PROT)

HSP 1 Score: 286 bits (732), Expect = 3.160e-91
Identity = 154/306 (50.33%), Postives = 211/306 (68.95%), Query Frame = 1
Query:   82 VAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIATSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            VA+A  + V  SD F GR+ A ++V+VRARV GY+ +V F  G  V++G+VL  IDPRPF+A +  AEA +AA   +L+LA+ E AR +Q++  +ATSR+E D   + V    A+  A +A    +RLDL +TR+ API GRVG+ E+T GNLVQGE PD P+LTT+V++ PIY  FE DER +L+Y     G+ +PV +GL +E GFP + +L FVDN VD  +GTVRMRALLDN+    TPGL+ARV++   + AR  V+V DRAIGTDQ ++FV+VV +D  A YREV +G  + + R+IE G
Sbjct:   39 VASAEARTVVRSDVFTGRLAAVESVEVRARVTGYIEEVRFKQGEMVRKGDVLMIIDPRPFEANMARAEAEVAAAKTRLELARKELARSEQLVKVNATSRQELDQRASAVDDALAALRAAQAQANRLRLDLAYTRIVAPIDGRVGRIEITAGNLVQGEIPDPPLLTTIVAITPIYAEFEVDERVYLEYGLNKPGKRMPVYIGLANEEGFPRKGELVFVDNQVDPTTGTVRMRALLDNSDGSLTPGLYARVKLADESQAREAVVVPDRAIGTDQDRKFVMVVDEDNKATYREVKLGPLLAHERVIERG 344          
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A841HKI6_9GAMM (RND family efflux transporter MFP subunit n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HKI6_9GAMM)

HSP 1 Score: 275 bits (703), Expect = 1.270e-86
Identity = 161/337 (47.77%), Postives = 217/337 (64.39%), Query Frame = 1
Query:   13 LSACQPPAPPSXXXXXXXXXXVSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYI--------ATSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            LS C   A PS          V+VAAAL +DV + DEF GR+EA ++V++R RV GY+  V FT G+ V+QG++LF IDPRP++A + +A A L    A+ +LA+ + AR +++L+  A S+ E+D      +  +A+ AA +A + + RLDLEFTRVTAPISGRV K EVT GNLV      +P+LTT+VS+DPIYVSFE DE+ +LKY         A+SR  + PVQ+GL +E G+PH   + FVDN +D  +GT+R RA   N    FTPGLFARV++     +   VLV DRA+GTDQS++FV VV  D    YR V IGR    LRI++ G
Sbjct:   25 LSGCSSEATPSGPAQGTP---VTVAAALQRDVTEWDEFTGRVEAVESVEIRPRVTGYIESVNFTEGSTVRQGDLLFVIDPRPYRAALDKAAAELTRAKARAELARNDIARSEKLLAIKAVSQEEYDQRVNGAREADATVAAAQAAVESARLDLEFTRVTAPISGRVSKAEVTAGNLVTAGAGTAPLLTTVVSIDPIYVSFEGDEQVYLKYTELARRGERASSRDAANPVQMGLANEDGYPHTGTMVFVDNRIDPRTGTIRARASFSNKDGYFTPGLFARVKL-LGHNSYPAVLVDDRAVGTDQSQKFVYVVDADNKVTYRAVKIGRLNDGLRIVQQG 357          
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A7W0JY25_9BACT (Efflux RND transporter periplasmic adaptor subunit n=3 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7W0JY25_9BACT)

HSP 1 Score: 274 bits (700), Expect = 2.430e-86
Identity = 150/316 (47.47%), Postives = 209/316 (66.14%), Query Frame = 1
Query:   76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIA--------TSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            V+VAA   +DV++ DEF GR+EA  AV++R RV+GY+++V F  G  V++G+VLFEIDPRP+ A +  AEA L    A+ +LA  +  R +++++  A SR E D+ TA     EA+  A  A +   RLDLE+T+V +PISGRVG+ EVT GNLVQ  + D+ +LTT+VS+DPIYV FE DE+ +LKY A         SR    P+Q+GL DE GFPH+  + FVDN ++  +GT+R RA+  N   RFTPGLFAR+R+   +G     LV DRA+GTDQ K+FV+V+  D    YR V +GR +   R+++SG
Sbjct:   36 VTVAAVPERDVREWDEFTGRLEAVDAVEIRPRVSGYIHRVAFNEGNGVRKGQVLFEIDPRPYAAALARAEAELEVARARSELAGRDVIRAERLVAVQAISREELDSRTAGQAENEAAVRAAEAAVTTARLDLEWTKVRSPISGRVGRAEVTEGNLVQAGSADAALLTTVVSLDPIYVYFEGDEQTYLKYSALARDGSRPNSRDNRTPIQLGLSDEQGFPHEGYVDFVDNQLNAEAGTIRFRAVFSNKDHRFTPGLFARIRL-VGSGTYPAKLVLDRAVGTDQDKKFVMVLKPDSTVDYRPVQLGRLIDGFRVVDSG 350          
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: UPI001933B1A2 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Steroidobacter gossypii TaxID=2805490 RepID=UPI001933B1A2)

HSP 1 Score: 274 bits (701), Expect = 3.040e-86
Identity = 150/316 (47.47%), Postives = 214/316 (67.72%), Query Frame = 1
Query:   76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIA--------TSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            VSVAAAL ++VQ+ DEF GR+EA ++V++R RV GY+  V F  G+ VK+G++LF IDPRP++A + +AEA LA  +A+ +LA  +  R +++L + A SR E+D      +  +A+  A RA +   +L+LEFTRV +PI+GRV + EVT GNLV G +  + +LTT+VS+DPIYV+FE DE+ +LKY          +SR  + PV + L +E GFPH+ ++ FVDN VD  +GT+R RA  DN     TPGLFARV++     + +VVLV DRA+GTDQS++FV VV +D   +YR+V +GR    LRI+E G
Sbjct:   49 VSVAAALEREVQEWDEFTGRLEAVESVEIRPRVTGYIESVNFDQGSVVKKGDLLFVIDPRPYRAALDQAEAELARAIARAELATNDVERSEKLLDAKAVSREEYDQRINAQRESQANVEAARAAVTAAKLNLEFTRVVSPINGRVSRAEVTAGNLVTGGSTQATLLTTVVSIDPIYVTFEGDEQVYLKYTELARRGDRPSSRDAANPVLMALANEQGFPHEGRMSFVDNQVDPRTGTIRARASFDNKDGYLTPGLFARVKL-LGHSSHKVVLVDDRAVGTDQSEKFVYVVDNDNKVSYRQVKVGRLTDGLRIVEEG 363          
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: UPI00143C62DD (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Solimonas marina TaxID=2714601 RepID=UPI00143C62DD)

HSP 1 Score: 273 bits (699), Expect = 5.720e-86
Identity = 161/336 (47.92%), Postives = 218/336 (64.88%), Query Frame = 1
Query:   16 SACQPPAPPSXXXXXXXXXXVSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIA-TSRGQ-------SLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            +A  PPAP            V+V AA+ Q++ D D + GR  ATQ V++R RV GY+++V F  G+ VKQG++LF+IDPRPF+A++ +A+A LA   +Q +LAK EAAR + +L  HA SR E+D+  + +    AS  A +A + +  LDL FTRVTAPI GRV + EVT GN V        +LT++VSVDPIYV F+ DER++LKY A  SRG+       +LPV VGL DE GFPH  ++ F+DN +D  +GT+R RA+L N   RFTPGLFARV++   +G     L+ +RAIGTDQSK+FV VV D     YR V +G + G LR++ SG
Sbjct:   39 AAATPPAP-----------QVTVRAAVQQNIVDWDTYTGRFAATQRVELRPRVAGYIDRVAFDEGSVVKQGQLLFQIDPRPFQARLDQAKAELARAQSQQELAKTEAARAENLLKVHAISREEYDSRASNLGQTTASLRAAQAAVESAALDLSFTRVTAPIGGRVSRAEVTAGNYVSA---GQTILTSVVSVDPIYVYFDGDERSYLKYAAQASRGERPSERDHALPVFVGLADENGFPHAGRIDFLDNALDPQTGTIRARAVLPNPDGRFTPGLFARVQL-LGSGRHEATLLDERAIGTDQSKKFVYVVDDQNKVQYRAVTLGSEHGGLRVVTSG 359          
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A829Y500_9GAMM (Resistance-nodulation-cell division (RND) multidrug efflux membrane fusion protein MexE n=4 Tax=Steroidobacter TaxID=469322 RepID=A0A829Y500_9GAMM)

HSP 1 Score: 272 bits (696), Expect = 1.620e-85
Identity = 153/316 (48.42%), Postives = 210/316 (66.46%), Query Frame = 1
Query:   76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIA--------TSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            VSVAAAL +DVQ+ DEF GR+EA ++V++R RV GY+  V FT G+ VK+GE+LF IDPRP++A + +AEA LA  VA+ +L+  +  R +++L   A SR E+D      +  +A+  A RA +   +L+LEFTRVTAPI+GRV +  VT GNLV G +  + +LTTLVS+DPIYV+FE DE+ +LKY          +SR  + PV + L +E GFPH+  + FVDN VD  +GT+R RA  +N     TPGLFARV++     + + VLV DRAIGTDQS++FV VV  +   +YR V +GR    LRI+E G
Sbjct:   49 VSVAAALERDVQEWDEFTGRLEAVESVEIRPRVTGYIESVNFTEGSIVKKGELLFVIDPRPYRADLSKAEAELARAVARAELSNTDVVRSEKLLGVKAVSREEYDQRLNAQRESQANVEAARAAVTAAKLNLEFTRVTAPITGRVSRAVVTAGNLVTGGSTQATLLTTLVSIDPIYVTFEGDEQVYLKYTELARRGDRPSSRDAANPVLMALANEQGFPHKGAMTFVDNQVDPRTGTIRARASFENKDGYLTPGLFARVKL-LGHSSHKTVLVDDRAIGTDQSQKFVYVVDGENKVSYRSVKVGRLTDGLRIVEDG 363          
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A2D2DPN9_9BURK (Efflux transporter periplasmic adaptor subunit n=11 Tax=Massilia TaxID=149698 RepID=A0A2D2DPN9_9BURK)

HSP 1 Score: 271 bits (692), Expect = 1.030e-84
Identity = 143/310 (46.13%), Postives = 214/310 (69.03%), Query Frame = 1
Query:   76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKY-IATSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGAR-RVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            ++ A  + + V ++ EF GR+EA   V +RARVNG++  V F PG+ VK+G++LF IDPRP++A+   AEAA+++  A+ DLAKLE AR +++L   A ++REFD   + +K L+A+  A +A+L   RL+L +T V API GRV K EVT GNLV G    + +LT++VS +PIY +F+ DE  +L+      +G ++PV++GL +E+GFPH+ KL+FVDN +D A+G+VRMRA+ DN      PGLFARV++  +   + + VL++DRAIGTDQ+++FV V+G D  A YR V +G  +  LR++ SG
Sbjct:   46 ITAATVIERSVNETQEFSGRLEAVDRVDIRARVNGFITSVNFKPGSVVKKGDILFVIDPRPYQAEANRAEAAVSSARARADLAKLELARAERLLGDKAIAQREFDEKASGLKELDANVRAAQASLEAARLNLSYTNVHAPIGGRVSKAEVTTGNLVDG----TVILTSVVSSNPIYATFDGDEDTYLRVGRVAQKGATVPVKIGLANESGFPHEGKLEFVDNRLDSATGSVRMRAMFDNTDNTLVPGLFARVQLSGSDSTQAKTVLISDRAIGTDQNRKFVYVIGADSKAEYRAVTLGPSIDGLRVVRSG 351          
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A838HDT4_9BACT (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A838HDT4_9BACT)

HSP 1 Score: 270 bits (689), Expect = 1.200e-84
Identity = 156/341 (45.75%), Postives = 219/341 (64.22%), Query Frame = 1
Query:    1 LALFLSACQPPAPPSXXXXXXXXXXVSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKY--------IATSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            +AL  S C   APP XX        V+VA  + +++ + DEF GR++A  AV++R +V+G + +V FT GTEV++G++LF IDPRP++A++  A+A L  T  Q +LAK +  R Q +++  A SR EFD   A ++   AS  A  A +A  RLD+E+TRV +PI GRV + EVT GNLV    P + +LTT++S+DPIYV FE DE+ +LKY         A+SR    P+ +GL +E GFPH+  + FVDN +D ++GT+R RA+  NA   FTPGLFAR+++   +G  R VLV D AIGTDQ K+FVLV+  D    YR + +GR V  LRI+ SG
Sbjct:   20 IALIASGCGGDAPPXXXAPQ-----VTVATVIGREINEWDEFTGRLQAVDAVEIRPQVSGKIQRVGFTEGTEVRKGDLLFVIDPRPYQAELDRAQAELERTRTQAELAKRDLERAQTLVAKEAISREEFDIRAAALEESGASIRAAEANVAQARLDVEWTRVRSPIDGRVSRAEVTAGNLVDAGPPSATLLTTVMSIDPIYVYFEGDEQTYLKYGRLSRSGERASSRDSRNPIFLGLSNEEGFPHEGYVDFVDNQLDPSTGTIRARAVFSNARGMFTPGLFARLKL-IGSGRYRAVLVRDSAIGTDQDKKFVLVLKADNTVEYRRIELGRLVEGLRIVSSG 354          
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A1Q6ZKZ5_9BACT (HlyD_D23 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium 13_2_20CM_2_65_7 TaxID=1805202 RepID=A0A1Q6ZKZ5_9BACT)

HSP 1 Score: 267 bits (683), Expect = 7.130e-84
Identity = 155/313 (49.52%), Postives = 206/313 (65.81%), Query Frame = 1
Query:   76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDA-ATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIATSRGQSL----PVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            V+VAA    DV D DEF GR+EA  AV++R RV+GY+ +V FT GTEV++GEVLFEIDPRP+ A +  AEA L  T     LA  + +R Q+++ + A SR EFD   TA  +   A R A  A LA  RL+LE+T V +PI+GRV +  VTVGNLVQ   P + +LTT+VSVDPIY   + DE+ +LKY A +R  +     PV +GL +E GFPH+  L FVDN ++  +GT+R+RA+  N  R FTPGLFAR+++ A +G  R  L+ D AIGTDQ K+FVLV+  D   AYR V +G  V  LR++ +G
Sbjct:   33 VTVAAVAEHDVTDWDEFTGRLEAVDAVEIRPRVSGYITRVAFTEGTEVRRGEVLFEIDPRPYAADLARAEAELERTRTTAALAARDVSRAQRLVEARAISREEFDTRVTAEAEGAAAVRVAE-AALATARLNLEWTEVRSPIAGRVSRAAVTVGNLVQEGPPSATLLTTVVSVDPIYAYVDGDEQTYLKYAAFARADARAGREPVYLGLANEQGFPHKGYLDFVDNRLNPETGTIRLRAVFPNKERLFTPGLFARLKL-AGSGHYRAPLILDGAIGTDQDKKFVLVLNPDSTLAYRPVQLGPLVQGLRVVATG 343          
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Match: A0A534D4Z3_9GAMM (Efflux RND transporter periplasmic adaptor subunit n=7 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534D4Z3_9GAMM)

HSP 1 Score: 266 bits (679), Expect = 5.470e-83
Identity = 158/313 (50.48%), Postives = 208/313 (66.45%), Query Frame = 1
Query:   76 VSVAAALTQDVQDSDEFPGRIEATQAVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAATVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATLANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPIYVSFEADERAFLKYIATSR-----GQSLPVQVGLIDETGFPHQAKLQFVDNNVDVASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQSKRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG 999
            V+VAAA+++ V + DEF GR EA + V+VR RV+GY++ V FT G+E+K+G+VLF IDPRP+ A+  +A A LA           E  R  Q++S HA SR EFD  T+  +  +A+  A +A L    L+LEFTRVTAPI+GR+ +  VT GN V        +LTTLVS+DPIYVSF+ DE+ +LKY   SR     G++ PVQVGL DE+G+PHQ  + FVDN +D A+GT+R RALLDN  R FTPGLFAR+R+  A      VL+ D A+GTDQ+ R+VLVVG    A YR V +G  V  LR++ESG
Sbjct:   42 VTVAAAISRKVTEFDEFTGRFEAVERVEVRPRVSGYISSVNFTDGSEIKKGDVLFVIDPRPYVAERDKARAQLAQXXXXXXXXXSERDRATQLVSQHAISREEFDTRTSGSEQAQANVEAAQAALDAAALNLEFTRVTAPIAGRISRALVTSGNFVTN---GQTLLTTLVSLDPIYVSFDGDEKVYLKYTKLSRDGAHDGRN-PVQVGLADESGYPHQGVMVFVDNALDPATGTIRSRALLDNGDRLFTPGLFARLRLLGAHE-HEAVLINDSAVGTDQTVRYVLVVGAGNKAEYRPVQLGPIVDGLRVVESG 349          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17588.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2W4M8F6_9PROT3.160e-9150.33Efflux transporter periplasmic adaptor subunit n=1... [more]
A0A841HKI6_9GAMM1.270e-8647.77RND family efflux transporter MFP subunit n=1 Tax=... [more]
A0A7W0JY25_9BACT2.430e-8647.47Efflux RND transporter periplasmic adaptor subunit... [more]
UPI001933B1A23.040e-8647.47efflux RND transporter periplasmic adaptor subunit... [more]
UPI00143C62DD5.720e-8647.92efflux RND transporter periplasmic adaptor subunit... [more]
A0A829Y500_9GAMM1.620e-8548.42Resistance-nodulation-cell division (RND) multidru... [more]
A0A2D2DPN9_9BURK1.030e-8446.13Efflux transporter periplasmic adaptor subunit n=1... [more]
A0A838HDT4_9BACT1.200e-8445.75Efflux RND transporter periplasmic adaptor subunit... [more]
A0A1Q6ZKZ5_9BACT7.130e-8449.52HlyD_D23 domain-containing protein n=1 Tax=Gemmati... [more]
A0A534D4Z3_9GAMM5.470e-8350.48Efflux RND transporter periplasmic adaptor subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17588contigP-wetherbeei_contig17588:1..999 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1500894.JQNN01000001_gene3050
Preferred nameacrA1
PFAMsHlyD_D23
Model size999
Max annot lvl28216|Betaproteobacteria
KEGG koko:K18901
KEGG TC2.A.6.2,8.A.1
KEGG ModuleM00698
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.54e-82
EggNOG OGsCOG0845@1|root,COG0845@2|Bacteria,1MU78@1224|Proteobacteria,2VHW3@28216|Betaproteobacteria,4733V@75682|Oxalobacteraceae
DescriptionBelongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Cds size999
COG categoryM
BRITEko00000,ko00002,ko01504,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186120.5788596-CDS-P-wetherbeei_contig17588:0..9991683186120.5788596-CDS-P-wetherbeei_contig17588:0..999Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17588 1..999 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17588.1.1prot_P-wetherbeei_contig17588.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17588 1..999 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17588.1.1

>prot_P-wetherbeei_contig17588.1.1 ID=prot_P-wetherbeei_contig17588.1.1|Name=mRNA_P-wetherbeei_contig17588.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=333bp
LALFLSACQPPAPPSAAGPAAAPPPVSVAAALTQDVQDSDEFPGRIEATQ
AVKVRARVNGYLNKVLFTPGTEVKQGEVLFEIDPRPFKAKVGEAEAALAA
TVAQLDLAKLEAARQQQMLSSHATSRREFDAATALVKSLEASRAANRATL
ANVRLDLEFTRVTAPISGRVGKDEVTVGNLVQGENPDSPVLTTLVSVDPI
YVSFEADERAFLKYIATSRGQSLPVQVGLIDETGFPHQAKLQFVDNNVDV
ASGTVRMRALLDNAARRFTPGLFARVRIEAATGARRVVLVADRAIGTDQS
KRFVLVVGDDKLAAYREVHIGRKVGNLRIIESG
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mRNA from alignment at P-wetherbeei_contig17588:1..999-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17588.1.1 ID=mRNA_P-wetherbeei_contig17588.1.1|Name=mRNA_P-wetherbeei_contig17588.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig17588:1..999- (Phaeothamnion wetherbeei SAG_119_79)
CTTGCGCTGTTTCTGTCCGCTTGTCAGCCACCCGCACCGCCATCTGCTGC GGGGCCGGCGGCTGCGCCGCCGCCGGTGAGCGTCGCTGCGGCGCTCACCC AGGACGTGCAGGACAGTGACGAATTCCCCGGACGCATCGAGGCCACCCAG GCAGTCAAGGTACGGGCGCGGGTCAATGGTTATCTGAATAAAGTGCTGTT CACACCCGGCACCGAGGTCAAGCAGGGCGAGGTCCTGTTTGAGATCGATC CGCGGCCGTTCAAGGCCAAGGTCGGCGAGGCCGAGGCGGCGCTGGCGGCC ACCGTCGCGCAGCTCGATCTCGCCAAGCTCGAGGCCGCGCGCCAGCAGCA GATGCTGAGCAGTCACGCCACCAGTCGCCGCGAGTTCGATGCCGCGACGG CGCTGGTCAAAAGCCTGGAGGCCAGTCGCGCCGCCAACCGCGCGACGCTC GCCAATGTGCGTCTCGACCTCGAGTTCACCCGCGTCACCGCCCCGATCAG TGGCCGGGTCGGCAAGGACGAGGTCACGGTCGGCAATCTGGTGCAGGGCG AGAACCCCGATTCACCCGTGCTGACCACCCTGGTCTCGGTCGACCCGATC TACGTGTCCTTTGAAGCCGACGAACGCGCCTTCCTGAAATACATCGCCAC CAGCCGCGGCCAGTCACTGCCGGTGCAAGTCGGGCTCATCGACGAGACCG GCTTCCCGCACCAGGCCAAACTGCAATTCGTCGACAACAATGTCGACGTG GCGAGCGGCACGGTGCGCATGCGTGCGCTGCTCGACAACGCCGCGCGACG CTTCACGCCGGGTCTGTTTGCGCGCGTGCGGATCGAGGCCGCGACCGGCG CGCGGCGTGTGGTACTGGTCGCTGATCGCGCCATCGGTACCGATCAGAGC AAGCGCTTCGTACTGGTGGTCGGCGACGACAAGCTGGCCGCTTATCGTGA GGTGCATATCGGGCGCAAGGTCGGCAATCTGCGCATCATCGAGAGCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17588:1..999-

>mRNA_P-wetherbeei_contig17588.1.1 ID=mRNA_P-wetherbeei_contig17588.1.1|Name=mRNA_P-wetherbeei_contig17588.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=999bp|location=Sequence derived from alignment at P-wetherbeei_contig17588:1..999- (Phaeothamnion wetherbeei SAG_119_79)
CTTGCGCTGTTTCTGTCCGCTTGTCAGCCACCCGCACCGCCATCTGCTGC
GGGGCCGGCGGCTGCGCCGCCGCCGGTGAGCGTCGCTGCGGCGCTCACCC
AGGACGTGCAGGACAGTGACGAATTCCCCGGACGCATCGAGGCCACCCAG
GCAGTCAAGGTACGGGCGCGGGTCAATGGTTATCTGAATAAAGTGCTGTT
CACACCCGGCACCGAGGTCAAGCAGGGCGAGGTCCTGTTTGAGATCGATC
CGCGGCCGTTCAAGGCCAAGGTCGGCGAGGCCGAGGCGGCGCTGGCGGCC
ACCGTCGCGCAGCTCGATCTCGCCAAGCTCGAGGCCGCGCGCCAGCAGCA
GATGCTGAGCAGTCACGCCACCAGTCGCCGCGAGTTCGATGCCGCGACGG
CGCTGGTCAAAAGCCTGGAGGCCAGTCGCGCCGCCAACCGCGCGACGCTC
GCCAATGTGCGTCTCGACCTCGAGTTCACCCGCGTCACCGCCCCGATCAG
TGGCCGGGTCGGCAAGGACGAGGTCACGGTCGGCAATCTGGTGCAGGGCG
AGAACCCCGATTCACCCGTGCTGACCACCCTGGTCTCGGTCGACCCGATC
TACGTGTCCTTTGAAGCCGACGAACGCGCCTTCCTGAAATACATCGCCAC
CAGCCGCGGCCAGTCACTGCCGGTGCAAGTCGGGCTCATCGACGAGACCG
GCTTCCCGCACCAGGCCAAACTGCAATTCGTCGACAACAATGTCGACGTG
GCGAGCGGCACGGTGCGCATGCGTGCGCTGCTCGACAACGCCGCGCGACG
CTTCACGCCGGGTCTGTTTGCGCGCGTGCGGATCGAGGCCGCGACCGGCG
CGCGGCGTGTGGTACTGGTCGCTGATCGCGCCATCGGTACCGATCAGAGC
AAGCGCTTCGTACTGGTGGTCGGCGACGACAAGCTGGCCGCTTATCGTGA
GGTGCATATCGGGCGCAAGGTCGGCAATCTGCGCATCATCGAGAGCGGC
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