mRNA_P-wetherbeei_contig17569.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: D8LC96_ECTSI (Peroxisomal membrane protein PEX16 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC96_ECTSI) HSP 1 Score: 141 bits (355), Expect = 8.600e-37 Identity = 79/157 (50.32%), Postives = 97/157 (61.78%), Query Frame = 1
Query: 1 RAWLMAGEVLNVARPVVYSGVRLRRGDESRLAWLASLTVDVMAYACTARAYPDGYSLFAAGERRQPVQRRQWPGPATDSAAAAATVLSPAEAAELRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLLYVQRHHFYVAGS 471
+AWLMAGEV+++ RP+ YS G+ S WL SL +D A+ACTARA ++ P+ G A S L +AAELRRRK LW LYL+RSP FE+LA P +R A VFEGVP+LGG+A YAL MLLYVQRHHFY + S
Sbjct: 343 QAWLMAGEVIHILRPLAYSYGCAATGERSWRPWLISLGMDAAAFACTARAGGSSGAMALL----TPI------GEAGSSGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPILGGMAGYALNMLLYVQRHHFYTSAS 489
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: A0A835Z8Q5_9STRA (Peroxisomal membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q5_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.480e-23 Identity = 64/145 (44.14%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 1 RAWLMAGEVLNVARPVVYSGVRLRRGDESRLAWLASLTVDVMAYACTARAYPDGYSLFAAGERRQPVQRRQWPGPATDSAAAAATVLSPAEAAELRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLL 435
+AWL+ GE L+ RP YS R G+ + WL S++VDV + ACTARA + G R L+P + AELRRRK W+LYLLR+P FE+L PAA A F GVP+LGGLA+YAL+MLL
Sbjct: 295 KAWLLLGEGLHAIRPAAYSAACGRLGEAAWAPWLLSMSVDVASRACTARA------VEVRGGRGN------------------GGALTPEQRAELRRRKVQWVLYLLRTPAFELLLGPAATGAAGAFGGVPVLGGLASYALQMLL 415
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: A0A7R9U860_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U860_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.660e-15 Identity = 61/177 (34.46%), Postives = 93/177 (52.54%), Query Frame = 1
Query: 10 LMAGEVLNVARPVVYSGV----------RLRRGD---ESRLAWL---ASLTVDVMAY----ACTARAYPDGYSLF--AAGERRQPVQRRQWPGPATDSAAAAATVLSPAEAAE-LRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLLYVQRHHFYVAGS 471
L+ GE+L++ RP ++ + RL +G+ S +WL S +D ++ A AR D L +A R R G T A+ ++ AE E LRRRK W+LYLLRSP+F+++ P A+ T V PL+G L+NYA+++L+++Q HHFY +GS
Sbjct: 171 LLLGEILHILRPFLFCVIERLVLRRQLRRLGKGEGPPNSYGSWLLLAGSFWMDFLSDRSSGAALARREVDLLELGVRSAESLRSTTGPRTGTGILTREASLTRAMMRFAEQKEELRRRKMQWLLYLLRSPLFQLICEPVAKTTDKVLGRAPLIGSLSNYAMQLLMHIQSHHFYTSGS 347
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: A0A1Y1I5V1_KLENI (Peroxisomal membrane protein PEX16 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I5V1_KLENI) HSP 1 Score: 80.5 bits (197), Expect = 1.090e-14 Identity = 60/157 (38.22%), Postives = 78/157 (49.68%), Query Frame = 1
Query: 1 RAWLMAGEVLNVARPVVYSGVRLRRGDESRLAWLASLTVDVMAYACTARAYPDGYSLFAAGERRQPVQRRQWPGPATDSAAAAATVLSPAEAAELRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLLYVQRHHFYVAGS 471
R L AGEVL RP+VY + G WL SL VD + A L AAG+ V +R G + L+ E +E+ RR+ L +LYL+RSPVFE++ P A A V VPLLG L + ALE+ VQ ++FY A S
Sbjct: 441 RTCLTAGEVLYAMRPLVYVLAMRKWGARKWKPWLLSLGVDAASMA-----------LIAAGDE---VLKRDARGKGKEGEGG----LTEQERSEMARRRVLLLLYLMRSPVFEMVTKPPAEAVGRVLWPVPLLGALTSKALEIFEGVQGYYFYTAAS 579
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: W7TST8_9STRA (Peroxisomal membrane protein PEX16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST8_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 6.300e-14 Identity = 62/182 (34.07%), Postives = 86/182 (47.25%), Query Frame = 1
Query: 10 LMAGEVLNVARPVVYSGVR----------------------LRRGD------ESRLAWLASLTVDVMAYACTARAYPDGYSLFAAGERRQPVQRRQWPGPATDSAAAAATVLSPAEAAELRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLLYVQRHHFYVAGS 471
L+AGE+L++ RP+V + +R LRRG ES L L +L +D+++Y CT A G D+A L + ELRRRK LW+LYLLR+PVFE L P RA +PL+GGLA+Y+ + L+Y+QRH +GS
Sbjct: 307 LLAGEILHILRPLVLASLRWALARRRRVKGRAVAAPPMGRSLRRGPLHSAAPESLLVLLPAL-MDLVSYQCTTGALNGG-----------------------DNA------LKQSCEDELRRRKNLWLLYLLRTPVFEGLTHPVTRAVDGSLVRLPLVGGLASYSYQALIYIQRHFTLTSGS 458
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: A0A5B6UNF2_9ROSI (Peroxisomal membrane protein PEX16 n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6UNF2_9ROSI) HSP 1 Score: 72.8 bits (177), Expect = 1.340e-12 Identity = 46/151 (30.46%), Postives = 72/151 (47.68%), Query Frame = 1
Query: 19 GEVLNVARPVVYSGVRLRRGDESRLAWLASLTVDVMAYACTARAYPDGYSLFAAGERRQPVQRRQWPGPATDSAAAAATVLSPAEAAELRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLLYVQRHHFYVAGS 471
GE+L + RP++Y R G S + W SL VD + G+ + + + V+R QW LS +E E++RRK LW LYL+R P F +T + E VPL+G L + +E+++ Q + Y++GS
Sbjct: 114 GEILFITRPLIYVLFIRRYGIRSWIPWFLSLGVDFI-----------GFGFLSHVTKSRMVEREQW------------FYLSASEKDEVKRRKLLWALYLMREPFFSKYTRQKLESTERLLEPVPLIGTLTSKLVELIIGAQTRYTYMSGS 241
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: A0A0B0MSZ8_GOSAR (Peroxisomal membrane protein PEX16 n=23 Tax=Gossypium TaxID=3633 RepID=A0A0B0MSZ8_GOSAR) HSP 1 Score: 73.2 bits (178), Expect = 2.900e-12 Identity = 47/156 (30.13%), Postives = 74/156 (47.44%), Query Frame = 1
Query: 4 AWLMAGEVLNVARPVVYSGVRLRRGDESRLAWLASLTVDVMAYACTARAYPDGYSLFAAGERRQPVQRRQWPGPATDSAAAAATVLSPAEAAELRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLLYVQRHHFYVAGS 471
A + GE+L + RP++Y R G S + W SL VD + G+ + + + V+R QW LS +E E++RRK LW LYL+R P F +T + E VPL+G L + +E+++ Q + Y++GS
Sbjct: 237 ALFVLGEILFITRPLIYVLFIRRYGIRSWIPWFLSLGVDFI-----------GFGFLSHVTKSRMVEREQW------------LHLSASEKDEVKRRKLLWALYLMREPFFSKYTRQKLESTERLLEPVPLIGTLTSKLVELIMGAQTRYTYMSGS 369
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: A0A5N6QFJ6_9ROSI (Peroxisomal membrane protein PEX16 n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6QFJ6_9ROSI) HSP 1 Score: 70.9 bits (172), Expect = 1.920e-11 Identity = 48/156 (30.77%), Postives = 71/156 (45.51%), Query Frame = 1
Query: 4 AWLMAGEVLNVARPVVYSGVRLRRGDESRLAWLASLTVDVMAYACTARAYPDGYSLFAAGERRQPVQRRQWPGPATDSAAAAATVLSPAEAAELRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLLYVQRHHFYVAGS 471
A +AGEVL + RP++Y + G S + W SL VD + + G Q ++RQW LS E E++RRK LW LYL+R P F +T V E VP++G L +E+++ Q + Y++GS
Sbjct: 235 ALYLAGEVLFITRPLIYVLFIRKYGSRSWIPWFLSLAVDFVGMGILSNVTKSG---------GQDKEQRQW------------FHLSVPEKDEIKRRKLLWALYLMRDPFFSKYTRQRLESTKNVLEAVPVVGFLTEKIVELMIGAQTRYTYMSGS 369
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: A0A7R9XXJ3_9VIRI (Peroxisomal membrane protein PEX16 n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XXJ3_9VIRI) HSP 1 Score: 68.2 bits (165), Expect = 2.500e-11 Identity = 56/174 (32.18%), Postives = 84/174 (48.28%), Query Frame = 1
Query: 19 GEVLNVARPVVYSGVRLRRGDESRLAWLASLTVDVMAYACTAR--------------AYPDGYSLFAAG----ERRQPVQRRQWPGPATDSAAAAATVLS------PAEAAELRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLLYVQRHHFYVAG 468
GEVL + RPV+Y+ + R G + + WL+SL +D+ + A R A DG S +AG E + + D+A AA V + E AE RR+AL + YL RSP+F +LA A EGVPLLG + ++ +E+ + Q ++FY +
Sbjct: 1 GEVLYITRPVLYALMLRRYGRTAWMPWLSSLGIDLASDALRVRSRQQIEALLRAVGHAGEDGSSASSAGAGEGEDKLAAAVKALTLADMDTATKAALVRALGHPQLQEERAETGRRRALLLYYLARSPIFNILAKRPLEAVGRSAEGVPLLGTIVSFLVEIAVGSQYYYFYTSS 174
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Match: A0A6P6AZW5_DURZI (Peroxisomal membrane protein PEX16 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6AZW5_DURZI) HSP 1 Score: 70.1 bits (170), Expect = 3.600e-11 Identity = 50/156 (32.05%), Postives = 74/156 (47.44%), Query Frame = 1
Query: 4 AWLMAGEVLNVARPVVYSGVRLRRGDESRLAWLASLTVDVMAYACTARAYPDGYSLFAAGERRQPVQRRQWPGPATDSAAAAATVLSPAEAAELRRRKALWMLYLLRSPVFEVLASPAARATAAVFEGVPLLGGLANYALEMLLYVQRHHFYVAGS 471
A + GEVL + RP++Y R G S + W SL VD + C + + +G+R R QW LS +E E++RRK LW LYL+R P F +T + E VPL+G LA +E+++ Q + Y++GS
Sbjct: 238 ALFVLGEVLFITRPLIYVLFIRRYGIRSWIPWFLSLAVDFIGIGCLSH-------VTRSGKRG----REQW------------FHLSASEKDEVKRRKLLWALYLMREPFFCKYTRQKLESTEKLLEPVPLIGTLAAKIVELVIGAQTRYTYMSGS 370 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17569.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17569.1.1 >prot_P-wetherbeei_contig17569.1.1 ID=prot_P-wetherbeei_contig17569.1.1|Name=mRNA_P-wetherbeei_contig17569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp MAGEVLNVARPVVYSGVRLRRGDESRLAWLASLTVDVMAYACTARAYPDGback to top mRNA from alignment at P-wetherbeei_contig17569:323..877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17569.1.1 ID=mRNA_P-wetherbeei_contig17569.1.1|Name=mRNA_P-wetherbeei_contig17569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig17569:323..877+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17569:323..877+ >mRNA_P-wetherbeei_contig17569.1.1 ID=mRNA_P-wetherbeei_contig17569.1.1|Name=mRNA_P-wetherbeei_contig17569.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig17569:323..877+ (Phaeothamnion wetherbeei SAG_119_79)back to top |