mRNA_P-wetherbeei_contig1755.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Match: A0A7S2SLX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLX0_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.610e-23 Identity = 82/230 (35.65%), Postives = 123/230 (53.48%), Query Frame = 3
Query: 861 VSLPSSMDISWTVDVDAATVSVTLTYMGDAWLAWGPSPDSK-MTGSDVIIGLPDAGTVSEYYISAKSNSGINEYPD--QELTNTSIVQQNGVTTVAFTRLLIPAGAGKIALPLTGDFSSVWAHGFGNSLSQHPTSAADSVSFGLTTCAADGXXXXXXXXXXXENTDELRTAHAWVMALTLGFFLPVGAIAARFGQRFQKGWWFSAHRSLQVLAVLGGIAGVIPGVVYVEK 1541
+SL S +D+ WT D T++ L Y G AW+A G S M GS+V++GLP+ GTV +Y ++ +S SG+ E P Q L T +VQ GVTT+ F++LL +G +IA+ G+ + V+A+G GNSL+ H A V L TC + H +M L + +P G +AA F + F W H +LQV+AV+ +AG+I V+ V++
Sbjct: 10 LSLDSDLDMYWTAD--NTTLTALLRYQGTAWVALGVSDSGGLMVGSEVVLGLPNDGTVLKYDLTERSASGVEEAPTVRQTLNGTVLVQSGGVTTMQFSKLLEESG--EIAIDGRGENTFVYAYGSGNSLAVHEGRGAVVVD--LLTCVSTSVDLQSIREGAV-------LLHGGLMVLGFSWLMPAGVMAAVF-KFFLGNSWIRWHATLQVIAVVCVVAGLILMVLEVDR 225
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Match: A0A6H5JKV6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV6_9PHAE) HSP 1 Score: 114 bits (286), Expect = 4.870e-23 Identity = 143/513 (27.88%), Postives = 209/513 (40.74%), Query Frame = 3
Query: 39 GAKSLYLLAC---IAAAMAAPLACKTSENDAYPCKLTVTSDLVVYLAVDTATDELAVEMTYTG-GDSWLGFAVASSAAGKMGGADAVVG---DARAVTSPITRYLLPEE-AYPFQTLGGVTDAAVESAAGNTGTTLSFRRPLVAGGSANGGVSVGAGVN-TFLYAIGNPGEGFGIHYLADSYQVQYSDLVIAATPTAAPMPKPTVRPVAXXXXXXXXXXXXXXXXKAHRTPAPAGDDDSGD--SDGGDNEATPTPTSAPGAGDSSPAPTAAGGVSACAA--PTYVRTVSLPSSMDISWTVDVDAATVSVTLTYMGDAWLAWGPSPDSKMTGSDVIIGLPDAGTVSEYYISAKSNSGINEYPDQELTNTSIVQQNGVTTVAFTRLLIPAGAGKIALPLTGDFSSVWAHGFGNSLSQHPTSAADSVSFGLTTCAADGXXXXXXXXXXXENTDELRTAHAWVMALTLGFFLPVGAIAARFGQRFQKGWWFSAHRSLQVLAVLGGIAGVIPGVVYVE 1538
G+K+L L+A + +A+ C S + ++ ++ VY VDTA +E+ +++ Y G G LGF S+ G M ADAVVG + A+ ++ Y L + + Q + G + +S TTL F RPL + +S G TF++A G+ F H + V SDL+ + DD GD +D D EA CA+ P + V+ + + W+V +VSV Y G+ +L+ G S M GSD +IGLPD T EY + + E DQE++N +I Q +GVTT+ F RLL PAG GK L ++ + ++A G N+ +H T A S++ T G AH W+MAL P G + ARF F K F AHR LQ L + I G V + E
Sbjct: 4 GSKALGLVAAGCVLGSALGQGSECTASTDASFDYQVIAEDGFTVYWTVDTAAEEVTMQVVYDGEGFVGLGF----SSTGAMVPADAVVGLPDEGTALEYDLSTYALSSDNEHETQEISGASVTQADST-----TTLVFTRPLSPADDSKTVLSAEEGEKATFIWAYGSSNT-FQYHEARGDFTV--SDLLCSEVVEEED------------------------------------DDSEGDXAADAADAEAA---------------------AENCASSDPDFEYEVAPHEDLALFWSVV--GTSVSVKAVYQGEGYLSIGFSDSGSMPGSDAVIGLPDEATALEYDMDSYGTP--EEAADQEISNATITQVDGVTTLTFVRLLEPAGDGKQILSVSEPTAWLYAWGGSNTFQEHSTRGAVSLTLDSCTVGDAGGGGT-----------STEYAHGWLMALGWTLCFPAGIMYARFSSSF-KDIGFPAHRLLQSLGSVFVIIGFFCAVAFTE 431
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Match: A0A6H5K4J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J1_9PHAE) HSP 1 Score: 108 bits (270), Expect = 2.480e-21 Identity = 74/218 (33.94%), Postives = 102/218 (46.79%), Query Frame = 3
Query: 885 ISWTVDVDAATVSVTLTYMGDAWLAWGPSPDSKMTGSDVIIGLPDAGTVSEYYISAKSNSGINEYPDQELTNTSIVQQNGVTTVAFTRLLIPAGAGKIALPLTGDFSSVWAHGFGNSLSQHPTSAADSVSFGLTTCAADGXXXXXXXXXXXENTDELRTAHAWVMALTLGFFLPVGAIAARFGQRFQKGWWFSAHRSLQVLAVLGGIAGVIPGVVYVE 1538
+SWTVD D ++V Y G WLA G S +M GSD +IGLP A TV EY + S + QE+++ +I Q GVTT+ F R L P+G GK L ++ ++W + +G S + S L +C+ H W+M L P+G + ARF F K F AHR LQ L L IAG + V++ E
Sbjct: 140 LSWTVDTDTQEITVEAVYQGSGWLAIGWSDSGRMPGSDAVIGLPSAETVLEYDMPDYSTPSASAV--QEISDATITQAGGVTTLKFVRPLEPSGDGKQLLSVSDP--AIWLYAWGGSNNFVLHSVVGGFYLALDSCSIGSLTGGT----------RAEYVHGWLMVLGWTLCFPMGILFARFSSSF-KDLGFPAHRVLQSLGSLLVIAGFVVSVIFTE 342
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Match: A0A6H5JWF4_9PHAE (Cytochrome b561 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF4_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 6.110e-13 Identity = 60/185 (32.43%), Postives = 86/185 (46.49%), Query Frame = 3
Query: 984 MTGSDVIIGLPDAGTVSEYYISAKSNSGINEYPDQELTNTSIVQQNGVTTVAFTRLLIPAGAGKIALPLTGDFSSVWAHGFGNSLSQHPTSAADSVSFGLTTCAADGXXXXXXXXXXXENTDELRTAHAWVMALTLGFFLPVGAIAARFGQRFQKGWWFSAHRSLQVLAVLGGIAGVIPGVVYVE 1538
M G D +IGLP A TV EY + S + QE+++ +I Q GVTT+ F R L P+G GK L ++ ++W + +G S + S L +C+ + H W+M L P+G + ARF + F KG F AHR LQ L L IAG + V++ E
Sbjct: 1 MPGGDAVIGLPSAETVLEYDMPDYSTPSASAV--QEISDATITQAGGVTTLKFVRPLEPSGDGKQLLSVSDP--AIWLYAWGGSNTFILHSMVGGFYLALDSCSIGSLTGGT----------KAEYVHGWLMVLGWTLCFPMGILFARFSRSF-KGLGFPAHRVLQSLGSLLVIAGFVVSVIFTE 170
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Match: D7FJ77_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ77_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 1.640e-9 Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 3
Query: 882 DISWTVDVDAATVSVTLTYMGDAWLAWG-PSPDSKMTGSDVIIGLPDAGTVSEYYISAKSNSGINEYPDQELTNTSIVQQNGVTTVAFTRLLIPAGAGKIALPLTGDFSS-VWAHGFGNSL 1238
+I WT++ D +++ + AW G PS D + GSDVIIGLPD +V EY + ++ + + Q++T SIVQ +G TT++F R L P G + + GD + ++ G N L
Sbjct: 47 EIRWTLNNDTKMIAIQMVTSSVAWAGIGFPSVDLDLVGSDVIIGLPDNSSVLEYEVLGETAEEVVVFEQQDITEASIVQADGSTTLSFIRPLSPGGNKQNISYVAGDATKLIFGQGADNEL 167
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Match: A0A6H5JSH0_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSH0_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 6.880e-6 Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 3
Query: 948 AWLAWG-PSPDSKMTGSDVIIGLPDAGTVSEYYISAKSNSGINEYPDQELTNTSIVQQNGVTTVAFTRLLIPAG 1166
AW G PS D + GSDVIIGLPD +V EY + ++ + + Q++T S+VQ +G TT++F R L P G
Sbjct: 7 AWSGIGFPSTDLDLVGSDVIIGLPDDPSVLEYEVLGETAEEVVVFEQQDITEASVVQADGSTTLSFIRPLSPGG 80
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Match: UPI0009E534A2 (cytochrome b561 and DOMON domain-containing protein At2g04850 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E534A2) HSP 1 Score: 59.3 bits (142), Expect = 1.280e-5 Identity = 66/251 (26.29%), Postives = 109/251 (43.43%), Query Frame = 3
Query: 849 YVRTVSLPSS-MDISWTVDVDAATV--SVTLTYMGDA-WLAWGPSPDS-KMTGSDVIIGLPDAGTVSEYYISAKSNSGINEYPDQELTN----------TSIVQQNGVTTVAFTRLLIPAGAGKIALPLTGDFSSVWAHGF---GNSLSQHPTSAADSVS---FGLTTCAADGXXXXXXXXXXXENTDELRTAHAWVMALTLGFFLPVGAIAARFGQRF----QKGWWFSAHRSLQVLAVLGGIAGVIPGV 1526
Y + ++LP+ SWT +T+ S T T++ + W+A+G +P+S M+G+ +I PD + S + N + L++ S++Q V + A R+ A P + +W G G S + HPT+ D S L + +AD R+AH + A+T GFF+P GA+AAR+ +++ WF H ++Q+ AV G G GV
Sbjct: 32 YAKCLTLPTQDSSFSWTYHPQNSTLHLSFTGTFISPSGWVAFGINPESLSMSGTRALISFPDPTSSSLLLLPFLLNPSVKLQRSPLLSHPLDIPFLSPSASLIQSPSVRSGAIVRI----SASLHLSPNRTRINLIWNRGLYVQGYSPTVHPTTPIDLASRTTIDLLSASADISSKPLPTW--------FRSAHGSINAITWGFFIPAGAMAARYLRQWPGIGSGSTWFYIHAAVQISAVAVGSVGFGFGV 270
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Match: B5YMQ9_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMQ9_THAPS) HSP 1 Score: 59.3 bits (142), Expect = 1.730e-5 Identity = 41/126 (32.54%), Postives = 69/126 (54.76%), Query Frame = 3
Query: 861 VSLPSSMDISWTVDVDAATVSVTLTYMGDAWLAWG-PSPDSKMTGSDVIIGLP--DAGTVSEYYISAKSNSGINEYPD--QELTNTSIVQQNGVTTVAFTRLLIPAGAGKIALPLTGDFSSVWAHG 1223
V++P+S ++ +VS+TL Y G+AW+A+G S D KM G++ I+G P +YY+ + + I D Q L + S+ +G T + FT+++ + ++ LTGD + VWAHG
Sbjct: 424 VNVPASTNVK---KCKGCSVSMTLIYEGEAWVAFGFNSGDGKMIGTEAILGNPAMSDSEPGKYYLGGQYDEAIQPMEDEKQTLIDASVTFVDGRTIMKFTKIMKESNEIEV---LTGDNTFVWAHG 543
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Match: A0A7S2PHN9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PHN9_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 3.820e-5 Identity = 36/113 (31.86%), Postives = 57/113 (50.44%), Query Frame = 3
Query: 945 DAWLAWGPSPDSK--MTGSDVIIGLPDAGTVSEYYISAKSNSGINEYPDQELTNTSIVQQNGVTTVAFTRLLIPAGAGKIALPLTGDFSSVWAHGFGNSLSQHPTSAADSVSF 1277
+ W+ + P+ K M ++ +I LP+A TV +Y ++AKS GI Q LT+T++ Q++G T F + L G L LT + + A G N+L H S+ F
Sbjct: 58 EVWVGFAAQPEGKKQMIDANAVIALPEANTVQQYTLTAKSAVGIVPTDSQTLTDTTVTQEDGTTVATFKQPLSDNG-----LTLTSNNVYLMAKGTSNNLGYHAGRGFVSLDF 165 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1755.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1755.3.2 >prot_P-wetherbeei_contig1755.3.2 ID=prot_P-wetherbeei_contig1755.3.2|Name=mRNA_P-wetherbeei_contig1755.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=506bp MGFRGAKSLYLLACIAAAMAAPLACKTSENDAYPCKLTVTSDLVVYLAVDback to top mRNA from alignment at P-wetherbeei_contig1755:4172..6681+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1755.3.2 ID=mRNA_P-wetherbeei_contig1755.3.2|Name=mRNA_P-wetherbeei_contig1755.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2510bp|location=Sequence derived from alignment at P-wetherbeei_contig1755:4172..6681+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1755:4172..6681+ >mRNA_P-wetherbeei_contig1755.3.2 ID=mRNA_P-wetherbeei_contig1755.3.2|Name=mRNA_P-wetherbeei_contig1755.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1518bp|location=Sequence derived from alignment at P-wetherbeei_contig1755:4172..6681+ (Phaeothamnion wetherbeei SAG_119_79)back to top |