mRNA_P-wetherbeei_contig1755.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: D7G7D5_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D5_ECTSI) HSP 1 Score: 340 bits (871), Expect = 1.500e-112 Identity = 169/313 (53.99%), Postives = 213/313 (68.05%), Query Frame = 1
Query: 1 VQDALGFLLFLLFPGCMVWMPFFVLAAG---YCVVTCGNV--ILQALAATALAAAVFWPVTLWKNACYSRLALLTLRYTSMVLAWETPLHAPDARDRRAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAMAEDEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEGGVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPIEVPPPTLEPSAADIDRYHALFVERLRELFDKYKGAYGWGHKQLVIR 924
+Q+A LLF LFPGCMVW+PF + A Y + G +L L A AL FWP++ W + + RYTS AWE PL A Y APPHG+LPVGN++ ML FP+ WGF F+GLTT+AALRLPLMRHVMAW+GC A A + G S+GLCPGGVAEIFD+ ++EVL++K RKGFVKL+LR GT +VPCY FGNT + ++W D G+ R LSR++GFG++ +WGR+ LP+I R+P+L VTG PI VP P EP+ ADID+YH LFV LR +FDKYKG YGWG K+L+IR
Sbjct: 83 LQEAFSILLFFLFPGCMVWVPFALAGAAWAAYRYLPAGGAPQVLLGLGAVAL---FFWPLSHWPAFTRTWITPHIFRYTSCCFAWEAPLEA----SAGPYFLCAPPHGILPVGNLVTMLSFPMVWGFSFKGLTTDAALRLPLMRHVMAWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLKARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGILRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKPAGEPTQADIDKYHDLFVAELRRIFDKYKGPYGWGEKELIIR 388
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: A0A836C9N4_9STRA (Acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9N4_9STRA) HSP 1 Score: 332 bits (852), Expect = 4.380e-110 Identity = 163/308 (52.92%), Postives = 210/308 (68.18%), Query Frame = 1
Query: 1 VQDALGFLLFLLFPGCMVWMPFFVLAAGYCVVTCGNVILQALAATALAAAVFWPVTLWKNACYSRLALLTLRYTSMVLAWETPLHAPDARDRRAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAMAEDEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEGGVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPIEVPPPTLEPSAADIDRYHALFVERLRELFDKYKGAYGWGHKQLVIR 924
+QD G L FL FPGC++W+PF + Y G + A A+AA WP T W S + + RY S+V AWE PL R ++ V PPHG+LP+ N+L++LGF WGF GLT +AALRLP+MR +M+WVGC A+++ A L RG SIG+ PGGVAEIFD DEV++++ RKGFV+LALR+GTP+VPCY FGNT+L WYD G R +SRR+GFGV+ IWGR GLPVI+R+P+ A+TG PIEVP PSA +D++HALF+E L+ LFD++KGAYGWG KQLVIR
Sbjct: 60 LQDLAGVLAFLFFPGCLIWVPFIICGGAYLAFRSGTAAI-ATYVFAMAAVTLWPHTRWPGFIASFVTPIVFRYCSLVYAWEAPL------PNRHHILVCPPHGVLPIANLLLLLGFRAIWGFDVDGLTADAALRLPVMRQIMSWVGCGSATASAAKVQLDRGRSIGISPGGVAEIFDVNDPDEVIFMRARKGFVRLALRSGTPLVPCYCFGNTQLFHCWYDSGNRMRAISRRLGFGVMPIWGRFGLPVIYRQPLFAITGTPIEVPLDP-NPSAETVDKFHALFLEELQGLFDRHKGAYGWGDKQLVIR 359
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: A0A6H5K8U5_9PHAE (Acyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8U5_9PHAE) HSP 1 Score: 330 bits (847), Expect = 3.960e-109 Identity = 161/311 (51.77%), Postives = 207/311 (66.56%), Query Frame = 1
Query: 1 VQDALGFLLFLLFPGCMVWMPFFVLAAGYCV---VTCGNVILQALAATALAAAVFWPVTLWKNACYSRLALLTLRYTSMVLAWETPLHAPDARDRRAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAMAEDEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEGGVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPIEVPPPTLEPSAADIDRYHALFVERLRELFDKYKGAYGWGHKQLVIR 924
+Q+A LLF LFPGCMVW+PF + + + G LQ L A FWP+ W + + RYTS AWE PL A Y APPHG+LPVGN++ M+ FP+ WGF F+GLTT+AALRLPLMRHVM W+GC A A + G S+GLCPGGVAEIFD+ ++EVL+++ RKGFVKL+LR GT +VPCY FGNT + ++W D G+ R LSR++GFG++ +WGR+ LP+I R+P+L VTG PI VP EP+ ADID+YH LFV LR +FDKYKG YGWG K+L+I+
Sbjct: 68 LQEAFSILLFFLFPGCMVWVPFALAGVAWAAHRYLPAGGA-LQILLGLGAVALFFWPLRHWPAFTRTWITPHIFRYTSCCFAWEAPLEA----SAGPYFLCAPPHGILPVGNLVTMISFPLVWGFSFKGLTTDAALRLPLMRHVMTWIGCQSAGREEVARSVGEGWSVGLCPGGVAEIFDSNNDNEVLFLRARKGFVKLSLRMGTTLVPCYTFGNTRIFRSWQDPYGILRALSRKLGFGLLLVWGRMLLPIILRQPLLVVTGRPIVVPKSAGEPTQADIDKYHDLFVAELRRIFDKYKGPYGWGEKELIIQ 373
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: A0A1S6KM83_9STRA (Acyltransferase n=2 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S6KM83_9STRA) HSP 1 Score: 246 bits (628), Expect = 7.970e-76 Identity = 135/307 (43.97%), Postives = 189/307 (61.56%), Query Frame = 1
Query: 4 QDALGFLLFLLFPGCMVWMPFFVLAAGYCVVTCGNVILQALAATALAAAVFWPVTLWKNACYSRLALLTLRYTSMVLAWETPLHAPDARDRRAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAMAEDEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEGGVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPIEVPPPTLEPSAADIDRYHALFVERLRELFDKYKGAYGWGHKQLVIR 924
++ + + L+ G M+W+P VL V + ++ + L+ PV + +S L +Y S+ +A + PL D+ R Y+FVAPPHG+LP+GN++ + G FRGLTT+ ALRLPL RH + +G + A+ A L +G SIG+ GGVAEIF+ +DEV+ +K+RKGFVKLALRTGTP+V CY+FGNT+LL AWYD+GGV LSR + GV+ +WGR GLP++ R PVL PI VP EP+ ID YH+LF + L +LFD+YK YGW K+L+I+
Sbjct: 95 EEFVAIMFLLIIVGSMLWIPIAVLGFALYVRSAMAWVVMLIVFFTLS---LHPVPRIHDMVHSPLNHFIFKYFSLKMASDAPL---DSAGR--YIFVAPPHGVLPMGNLMTVHAMKACGGLEFRGLTTDVALRLPLFRHYLGAIGTIAATRHVAKQYLDKGWSIGISSGGVAEIFEVNNKDEVVLMKERKGFVKLALRTGTPLVACYIFGNTKLLSAWYDDGGVLEGLSRYLKCGVLPLWGRFGLPLMHRHPVLGAMAKPIVVPKVEGEPTQEMIDEYHSLFCQTLVDLFDRYKTLYGWPDKKLLIK 393
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: W7TJC9_9STRA (Acyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJC9_9STRA) HSP 1 Score: 238 bits (606), Expect = 7.800e-73 Identity = 123/255 (48.24%), Postives = 165/255 (64.71%), Query Frame = 1
Query: 160 PVTLWKNACYSRLALLTLRYTSMVLAWETPLHAPDARDRRAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAMAEDEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEGGVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPIEVPPPTLEPSAADIDRYHALFVERLRELFDKYKGAYGWGHKQLVIR 924
PV+ + +S L +Y SM +A + P+ D++ + Y+FVAPPHG+LP GN+L + G FRGLTT+ ALRLP+ RH + VG + AS A L +G S+G+ GGVAEIF+ DEV+ +K+RKGFVKLAL+TGTP+VP Y+FGNT+LL AWYD+ G + +SR FG++ +WGR GLP++ R PVL V PI VP EP+ ID HA F + L LFD YKG YGW K+L+I+
Sbjct: 119 PVSRVHSMVHSPLNYFIFKYFSMKMASDYPI---DSKGQ--YIFVAPPHGVLPFGNLLTVHAMKSCGGMEFRGLTTDVALRLPIFRHYLGLVGTIPASRHVARKYLDKGWSLGISSGGVAEIFEVNNNDEVILMKERKGFVKLALQTGTPLVPSYIFGNTKLLSAWYDDAGALQGISRYFKFGILLLWGRFGLPLMHRHPVLGVMAKPIVVPRAEGEPTQDMIDTIHAQFCDSLIALFDDYKGLYGWPDKKLLIK 368
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: A0A7S2S8P9_9STRA (Acyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8P9_9STRA) HSP 1 Score: 215 bits (548), Expect = 7.980e-64 Identity = 127/310 (40.97%), Postives = 175/310 (56.45%), Query Frame = 1
Query: 1 VQDALGFLLFLL-FPGCMVWMPFFVLAAGYCVVTCGNVILQALAATALAAAVFWPVTLWKNACYSRLALLTLRYTSMVLAWETPLHAPDARDRRAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAMAE--DEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEGGVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPIEVPPPTLEPSAADIDRYHALFVERLRELFDKYKGAYGWGHKQLVI 921
+ +A+ LLF PG + P V A YCV ++ A AL VF P + + S AL +RY S + PL + Y+ VAPPHG+ P GNI+ M+ FP G+ F+GL +AALR P+ +H++ +G +DAS A+A L +G +IG+ GGVAE+F+ + DE + +K RKG VKLA RTG +VPCY+FGNT+LL YD GV R +SR+VGF ++ WGR LP+ +R P+L G PI VP P+ ID H + + ELFD +K YGW K+LV
Sbjct: 95 LDEAVAVLLFAFGVPGFIFTFPMLVFAV-YCVWGPRPAVVLVGIAVAL---VFVPARFSEKSLSSWPALSIMRYFSFKAVYREPLEV-----GKPYILVAPPHGVFPFGNIVTMITFPAVMGYSFKGLAASAALRFPVFKHLLTTIGAIDASRASATKALNQGHTIGISTGGVAEVFETNSATGDECVVLKDRKGLVKLAFRTGASLVPCYLFGNTQLLSLAYDGSGVLRWISRKVGFALILFWGRFLLPIPYRIPILGGLGKPIPVPE-VENPTNEQIDEMHDKLLAAMEELFDTHKAIYGWEGKRLVF 394
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: A0A448ZRQ3_9STRA (Acyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRQ3_9STRA) HSP 1 Score: 203 bits (517), Expect = 2.320e-59 Identity = 107/253 (42.29%), Postives = 153/253 (60.47%), Query Frame = 1
Query: 190 SRLALLTLRYTSM--VLAWETPLHAPDARDRRAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAMAEDEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEG-----GVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPIEVPPPTLE-PSAADIDRYHALFVERLRELFDKYKGAYGWGHKQLVIR 924
S LA+ +Y S V+ P P ++ + ++VAPPHG+ P GNIL MLGFP +G HFRGL ++AALR P+ + V+ +G +DAS A L GESIG+ GGVAEIF +DE + +K+R G +KLA+RTG +VPCY+FGNT LL W EG V + SR++GF ++ I+GR LP+ FR+P+LAV G P+ E P+ I+ + + +F+ YK YGW K+++I+
Sbjct: 129 SYLAIQVSKYFSFRFVVEKRPPPPEPTNKNYHSGIYVAPPHGVFPYGNILSMLGFPTMFGHHFRGLASSAALRPPIFKQVLRSIGTIDASRHVARSALEGGESIGISTGGVAEIFFTNEKDECILLKERIGLIKLAIRTGADLVPCYLFGNTTLLNCWAGEGIPGATTVLEKFSRKLGFALILIYGRFFLPIPFRKPILAVMGKPVHTHHVKGEDPTPEQIEMIQTQLLTEVERIFNTYKHLYGWDEKKIIIK 381
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: A0A1E7FKA1_9STRA (Acyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKA1_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.350e-58 Identity = 104/226 (46.02%), Postives = 143/226 (63.27%), Query Frame = 1
Query: 277 RAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAMAEDEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEG-----GVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPIEVPPPTL-----EPSAADIDRYHALFVERLRELFDKYKGAYGWGHKQLVIR 924
R + VAPPHG+ P GNIL +L FP +G FRGL ++AALR P+ + ++ +G VDAS A + L GESIG+ GGVAEIF +DE + +K+R G +KLA+RTGT IVPCY+FGNT+LL W EG V ++SR++GF ++ I GR LP+ FR+PVL V PI PT +P+ I+ A +E ++ +FD YK YGW K+L+I+
Sbjct: 106 RPSIMVAPPHGVFPYGNILSVLSFPALYGCTFRGLASSAALRPPIFKQILRSIGIVDASRHVARNTLENGESIGISTGGVAEIFFTNDDDECILLKERIGLIKLAIRTGTNIVPCYLFGNTKLLNCWAGEGIPGGRYVLEKISRKIGFALILIHGRFFLPIPFRKPVLGVMSKPI----PTHHIQNEDPTPEQIECIQAQLLEEMKRIFDTYKHLYGWDDKKLIIK 327
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: A0A7S0SSG6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSG6_9STRA) HSP 1 Score: 177 bits (448), Expect = 3.870e-50 Identity = 95/267 (35.58%), Postives = 146/267 (54.68%), Query Frame = 1
Query: 154 FWPVTLWKNACYSRLALLTLRYTSMVLAWET--PLHAPDARDRRAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAM--------AEDEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEGGVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPIEVPPPTLEPSAADIDRYHALFVERLRELFDKYKGAYGWGHKQLVIR 924
F P + +N+CY + + L+Y S W PL P + V PPHG+ P G++L + P G + RG+ +A L P++ + + +VG +DAS L GESIG+ GG+AEIF+ E + +K R G KLAL TG+ ++P Y+FGN+ L WYD+ G+ +LSR + +V WGR LP+ +R P+L V G PI V P+ D+++ + +++ELFDK+K AYGW + +L+I+
Sbjct: 32 FIPTSFNRNSCYRYIFTIILKYFSHQGLWNEYIPLDKPS-------IIVGPPHGVFPFGSLLGCMSIPRTSGVYMRGIAASALLYFPIIGNFLRYVGIIDASRKNVIKHLNNGESIGISSGGIAEIFETKNVVINNTDTYQECIILKSRGGICKLALTTGSYLIPSYIFGNSNCLSIWYDKYGIMLKLSRLLRVSIVFFWGRWYLPIPYRTPILGVLGEPIHVVK-NENPTQEDVNKLLNILEVKIKELFDKHKAAYGWENVELIIK 290
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Match: A0A7S1GKX3_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKX3_CYCTE) HSP 1 Score: 173 bits (438), Expect = 1.370e-49 Identity = 86/192 (44.79%), Postives = 125/192 (65.10%), Query Frame = 1
Query: 229 VLAWETPLHAPDARDRRAYMFVAPPHGLLPVGNILIMLGFPVAWGFHFRGLTTNAALRLPLMRHVMAWVGCVDASSATAAHLLARGESIGLCPGGVAEIFDAMAEDEVLYIKKRKGFVKLALRTGTPIVPCYVFGNTELLKAWYDEG------GVCRRLSRRVGFGVVAIWGRLGLPVIFRRPVLAVTGAPI 786
V+ ET L + +AR + V+PPHG+ P GNI ++ +P+ + H R L ++ ALR P+M+ ++ +G DA A LARG S+G+ GGVAE+F+ DE + +K+RKG +KLA+R+G P+VPCYVFGNT++L W EG + R LSRRVG +VAI+GR GLP+ +R P+++V G PI
Sbjct: 2 VMISETDLDSSEAR-----LIVSPPHGVFPYGNIAALIEWPLMFNDHLRALASSTALRAPVMKQILRSIGMTDADRRNARAHLARGISLGISTGGVAEVFETNTSDECILLKERKGLIKLAIRSGAPLVPCYVFGNTKVLDCWAGEGLPTWAQSIQRGLSRRVGLALVAIYGRFGLPIPYRVPIMSVGGIPI 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1755.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1755.1.1 >prot_P-wetherbeei_contig1755.1.1 ID=prot_P-wetherbeei_contig1755.1.1|Name=mRNA_P-wetherbeei_contig1755.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=309bp VQDALGFLLFLLFPGCMVWMPFFVLAAGYCVVTCGNVILQALAATALAAAback to top mRNA from alignment at P-wetherbeei_contig1755:1590..3658- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1755.1.1 ID=mRNA_P-wetherbeei_contig1755.1.1|Name=mRNA_P-wetherbeei_contig1755.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2069bp|location=Sequence derived from alignment at P-wetherbeei_contig1755:1590..3658- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1755:1590..3658- >mRNA_P-wetherbeei_contig1755.1.1 ID=mRNA_P-wetherbeei_contig1755.1.1|Name=mRNA_P-wetherbeei_contig1755.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=927bp|location=Sequence derived from alignment at P-wetherbeei_contig1755:1590..3658- (Phaeothamnion wetherbeei SAG_119_79)back to top |