mRNA_P-wetherbeei_contig17541.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17541.1.1
Unique NamemRNA_P-wetherbeei_contig17541.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A8I1MA08_9PROT (Uncharacterized protein n=3 Tax=Thalassospira TaxID=168934 RepID=A0A8I1MA08_9PROT)

HSP 1 Score: 349 bits (896), Expect = 5.090e-113
Identity = 185/331 (55.89%), Postives = 239/331 (72.21%), Query Frame = 1
Query:   88 GFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLF 1080
            GF D  MVVVDVVLI T E+V  S G+NLLNGL+LQFGDPLT T GF   +      LD  L   T+TITR++ +P+V+YSLNIAN+ +A ++V+AKPSLVA AGQTS+FFSG+EI AAAVSGG GDSVS+++EVGVKLAV P+ LPD  +RL + A+RTFLT PS+SVVF+FRLDT+KTNVN+ V ++FGETL+L GL+E E + S DGVP L D+P +NLLF+QR   ++ +SVLIL+TPRRP Y  +A  DR   +  MS+ E+ + +L+ R+ DWF PR+  +EV E+L +   F  EFR GDV+   W    S+   I    NRL 
Sbjct:  242 GFADSSMVVVDVVLIGTQEDVRNSRGINLLNGLQLQFGDPLTGTAGFGYGSTRTKDYLDTGLEQSTQTITRAISIPAVTYSLNIANSADANNQVLAKPSLVAQAGQTSEFFSGTEILAAAVSGGNGDSVSVQKEVGVKLAVTPEILPDDMIRLHVVAERTFLTDPSNSVVFEFRLDTTKTNVNSTVTMKFGETLVLGGLSERETSKSADGVPGLMDVPILNLLFSQRVERQFERSVLILMTPRRPHYTRRAQADRDVTIEEMSDLERDIERLQHRHKDWFTPRATFNEVIEKL-QGREFFEEFRSGDVKVHSWQNDASNQKHIAMVQNRLL 571          
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A850KKT0_9HYPH (Uncharacterized protein n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A850KKT0_9HYPH)

HSP 1 Score: 348 bits (894), Expect = 8.420e-112
Identity = 187/331 (56.50%), Postives = 240/331 (72.51%), Query Frame = 1
Query:   88 GFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLF 1080
            GF +  MVVVDVVLI T E+V +S GVNLLNGL+LQFGDPLT   GFS S   V   L   LS  T TITRS+ +P+V+YSLNIAN+++A + V+AKPSLVA +GQTS+FFSG+EI AAAVSGG+GDSVS+++EVGVKLAV P+ LP+  +RL + A+RTFLT PS+SVVF+FRLDT+KTNVN+ V ++FGETL+L GL+E E + S+DGVP L+D+P +N LF+QR   E+ +S+LILLTPRRP Y  QA  DR+     MSE E+ L +LE R+ DW+ PR    E+R++L     F  EFR+GDV    W + +     I Q   RL 
Sbjct:  318 GFAESPMVVVDVVLIGTQEDVRDSRGVNLLNGLQLQFGDPLTGAMGFSLSDRNVKDNLGNGLSEGTRTITRSISIPAVTYSLNIANSLDADNHVLAKPSLVAQSGQTSEFFSGTEILAAAVSGGSGDSVSVQKEVGVKLAVTPEVLPNDMIRLHVVAERTFLTDPSNSVVFEFRLDTTKTNVNSTVTMKFGETLVLGGLSERETSKSSDGVPGLKDIPVLNYLFSQRVEREFERSILILLTPRRPNYTRQAKADREKVEEDMSELEQELARLEKRHGDWYTPRPTFTEIRDKLE-GREFFEEFRMGDVNVHSWYQEDEQPRLIAQVEKRLL 647          
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A199YKR4_9PROT (Uncharacterized protein n=11 Tax=Thalassospiraceae TaxID=2844866 RepID=A0A199YKR4_9PROT)

HSP 1 Score: 348 bits (892), Expect = 1.320e-111
Identity = 183/331 (55.29%), Postives = 240/331 (72.51%), Query Frame = 1
Query:   88 GFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLF 1080
            GF D  MVVVDVVLI T E+V  S G+NLLNGL+LQFGDPL+ T GF   +      L+  L   T+TITR++ +P+V+YSLNIAN+ +A ++V+AKPSLVA  GQTS+FFSG+EI AAAVSGG GDSVS+++EVGVKLAV P+ LPD  +RL + A+RTFLT PS+SVVF+FRLDT+KTNVN+ V ++FGETL+L GL+E E + S DGVP L D+P +NLLF+QR   ++ +SVLIL+TPRRP+Y  +A EDR   +  MS+ E+ + +LE R+ DWF PR+   EV E+L +   F  EFR GDV+ + W   E+    I    +RL 
Sbjct:  309 GFADTGMVVVDVVLIGTQEDVRNSRGINLLNGLQLQFGDPLSGTSGFGYESTRTKDYLNTGLEQSTQTITRAISIPAVTYSLNIANSADADNQVLAKPSLVAQTGQTSEFFSGTEILAAAVSGGNGDSVSVQKEVGVKLAVTPEILPDDMIRLHVVAERTFLTDPSNSVVFEFRLDTTKTNVNSTVTMKFGETLVLGGLSERETSKSADGVPGLMDIPIVNLLFSQRIERQFERSVLILMTPRRPLYARRAQEDRDVMIEEMSDLERDIERLENRHKDWFTPRATFSEVIEKL-QGREFFEEFRNGDVKIQSWQNDENGQQHIAMVRDRLL 638          
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A2G2R290_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2G2R290_9PROT)

HSP 1 Score: 347 bits (890), Expect = 2.770e-111
Identity = 189/340 (55.59%), Postives = 243/340 (71.47%), Query Frame = 1
Query:   70 QQGA---PGGFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLF 1080
            QQGA    GGFVD  MVVVDVVLI T E+V +S G+NLLNGL+LQFGDPL  T GF  ++   +  L   L  QT+TITRS+ +P+V+YSLNIAN++NA ++V+AKPSLVA  GQTS+FFSG+EI AAAVSGG+GDSVS+++EVGVKLAV P+ LPD  +RL I A+RTFLT PS+SVVF+FRLDT+KTNVN+ V ++FGETLIL+GL+E E + S DGVP L D+P +  LF+QR   ++ +S++ILLTPRRP Y  Q   +R A    MS+ E+ L +LE R+ DW+ PR    E+ E+L +   F  EFR GDV+ + W K       I     RL 
Sbjct:  302 QQGANAQQGGFVDTSMVVVDVVLIGTQEDVRDSRGINLLNGLQLQFGDPLAGTVGFGMTSTRTHDGLASGLGQQTKTITRSISIPAVTYSLNIANSLNANNQVLAKPSLVAQTGQTSEFFSGTEILAAAVSGGSGDSVSVQKEVGVKLAVTPEILPDDMLRLHIVAERTFLTDPSNSVVFEFRLDTTKTNVNSTVTMKFGETLILAGLSERETSKSADGVPGLMDIPILKYLFSQRVERQFERSIMILLTPRRPHYTRQGVAERDAVEQKMSDLERDLQRLEQRHGDWYTPRPTFSELVEKL-QGREFFEEFRNGDVKIQSWQKDPKGQQHITSVHKRLL 640          
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A2N3L6J0_9PROT (Uncharacterized protein n=5 Tax=Thalassospira TaxID=168934 RepID=A0A2N3L6J0_9PROT)

HSP 1 Score: 346 bits (888), Expect = 3.380e-111
Identity = 188/347 (54.18%), Postives = 244/347 (70.32%), Query Frame = 1
Query:   55 QPGFGQQGAPG-----GFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLF 1080
            Q G+G   A G     GF D  MVVVDVVLI T E+V  S G+NLLNGL+LQFGDPLT T GF   +      L+  L   T+TITR++ +P+V+YSLNIAN+ +A ++V+AKPSLVA AGQTS+FFSG+EI AAAVSGG GDSVS+++EVGVKLAV P+ LPD  +RL + A+RTFLT PS+SVVF+FRLDT+KTNVN+ V ++FGETL+L GL+E E + S DGVP L D+P +NLLF+QR    + +SVLIL+TPRRP+Y  +A  DR   +  MS+ E+ + +LE R+ DWF PR+   EV E+L +   F  EFR GDV+ + W    +    I    +RL 
Sbjct:  277 QGGYGAPTAQGNSGQQGFADTSMVVVDVVLIGTQEDVRNSRGINLLNGLQLQFGDPLTGTAGFGYGSTRTKDYLNTGLEESTQTITRAISIPAVTYSLNIANSADANNQVLAKPSLVAQAGQTSEFFSGTEILAAAVSGGNGDSVSVQKEVGVKLAVTPEILPDDMIRLHVVAERTFLTDPSNSVVFEFRLDTTKTNVNSTVTMKFGETLVLGGLSERETSKSADGVPGLMDIPILNLLFSQRVERHFERSVLILMTPRRPLYARRAQVDRDGMIEEMSDLERDIERLEQRHKDWFTPRATFSEVIEKL-QGREFFEEFRNGDVKIQSWQNDATGQQHIAMVRDRLL 622          
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A1Y2L9M4_9PROT (Uncharacterized protein n=2 Tax=Thalassospira alkalitolerans TaxID=1293890 RepID=A0A1Y2L9M4_9PROT)

HSP 1 Score: 345 bits (885), Expect = 1.820e-110
Identity = 192/358 (53.63%), Postives = 248/358 (69.27%), Query Frame = 1
Query:   10 PQPGGFPQQGA-GLPGQPGFGQQGAPGGFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLF 1080
            P P G  QQGA G  GQ G   Q    GF D  MVVVDVVLI T E+V  S G+NLLNGL+LQFGDPLT T GF   +      L+  L   T+T+TR++ +P+V+YSLNIAN+ +A ++V+AKPSLVA AGQTS+FFSG+EI AAAVSGG GDSVS+++EVGVKLAV P+ LPD  +RL + A+RTFLT PS+SVVF+FRLDT+KTNVN+ V ++FGETL+L GL+E E + S DGVP L D+P +NLLF+QR   ++ +SVLIL+TPRRP Y  +A  DR      MS+ E+ + + + R+ DWF PR+   EV E+L +   F  EFR GDV+ + W    +    I    +RL 
Sbjct:  293 PDPYGSQQQGAYGATGQQGGATQQ---GFADSSMVVVDVVLIGTQEDVRNSRGINLLNGLQLQFGDPLTGTTGFGYESTRTKDYLNTGLEESTQTLTRAISIPAVTYSLNIANSADANNQVLAKPSLVAQAGQTSEFFSGTEILAAAVSGGNGDSVSVQKEVGVKLAVTPEILPDDMIRLHVVAERTFLTDPSNSVVFEFRLDTTKTNVNSTVTMKFGETLVLGGLSERETSKSADGVPGLMDVPILNLLFSQRVERQFERSVLILMTPRRPQYARRAQADRDIANEEMSDLERDIERFQQRHKDWFTPRATFSEVMEKL-QGREFFEEFRNGDVKVQSWQSDANGQQHIAMVRDRLL 646          
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A2N3L0E5_9PROT (Uncharacterized protein n=7 Tax=Thalassospira TaxID=168934 RepID=A0A2N3L0E5_9PROT)

HSP 1 Score: 345 bits (884), Expect = 1.860e-110
Identity = 182/333 (54.65%), Postives = 235/333 (70.57%), Query Frame = 1
Query:   82 PGGFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLF 1080
            P  FVD  MVVVDVVLI T E+V +S G+NLLNGL+LQFGDPLT   G    +      L   L   T+TITR + +P+V+YSLNIAN+ +A ++V+AKPSLVA AG+TS+FFSG+EI AAAVSGG+GDSVS+++EVGVKLAV P+ LP+  +RL + A+RTFLT PS+SVVF+FRLDT+KTNVN+ V ++FGETLIL GL+E E + S DGVP L D+PG+N  F+QR   E+ +S+LIL+TPRRP+Y  Q+  DR A    +SE E+ L +LE R+ DW+ PR   D +REQL     F  EFR GDV+ + W         I    +RL 
Sbjct:  303 PTEFVDSGMVVVDVVLIGTQEDVRDSRGINLLNGLQLQFGDPLTGAAGLGYGSTKTKDYLGTGLEESTQTITRQIGIPAVTYSLNIANSADANNQVLAKPSLVAQAGETSEFFSGTEILAAAVSGGSGDSVSVQKEVGVKLAVTPEILPNDMIRLHVVAERTFLTDPSNSVVFEFRLDTTKTNVNSTVTMKFGETLILGGLSERETSKSADGVPGLMDIPGLNYFFSQRVEREFERSILILMTPRRPVYTRQSGSDRAAVNGELSELEQELAKLERRHGDWYTPRPTFDVLREQLE-GKAFFEEFRAGDVQIDAWQSNPESQQMIASVRDRLL 634          
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A154VF27_9PROT (Uncharacterized protein n=4 Tax=Thalassospira TaxID=168934 RepID=A0A154VF27_9PROT)

HSP 1 Score: 340 bits (872), Expect = 1.230e-108
Identity = 182/336 (54.17%), Postives = 241/336 (71.73%), Query Frame = 1
Query:   76 GAPGGFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLFI 1083
            GA G F D  MVVVDVVLI T E+V  S GVNLLNGL+LQFGDPL+ TPG+S  +N V    +      T+TITR + +P+V+YSLNIAN+ +A ++V+AKPSLVA  GQTS+FFSG+EI AAAVSGG GDSVS+++EVGVKLA+ P+ LPD  +RL + A+RTFLT PS+SVVF+FRLDT+KTNVN+ V ++F ETLIL GL+E E + S DGVP+L D+PG+N+LF+QR   E+ +SVLILLTPRRP +  Q+ E R A +  +S  E+ L +L  R+ DWF PR   +E+  ++ +   F +EFR GDV    W + E+    I    +R+ +
Sbjct:  303 GAGGSFSDTSMVVVDVVLIGTQEDVRHSRGVNLLNGLQLQFGDPLSGTPGYSIGSNRVKDYHNDGFERSTQTITRLISIPAVTYSLNIANSADADNQVLAKPSLVAQTGQTSEFFSGTEILAAAVSGGNGDSVSVQKEVGVKLAITPEILPDDMLRLHVVAERTFLTDPSNSVVFEFRLDTTKTNVNSTVTMKFDETLILGGLSERETSKSVDGVPLLMDIPGLNMLFSQRTEREFERSVLILLTPRRPQFARQSEESRDAVIEQLSPLEQDLERLHRRHQDWFTPRPAFNEILGKI-QGQEFFKEFRSGDVDLVSWHEDETVQDNIAMVQSRILM 637          
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A1Y2KWW4_9PROT (Uncharacterized protein n=1 Tax=Thalassospira mesophila TaxID=1293891 RepID=A0A1Y2KWW4_9PROT)

HSP 1 Score: 337 bits (865), Expect = 1.980e-107
Identity = 180/332 (54.22%), Postives = 233/332 (70.18%), Query Frame = 1
Query:   85 GGFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLF 1080
            G F+D  MVVVDVVLI T E+V  S G+NLLNGL+LQFGDPLT   GF   ++     L+  L+  T+TITR + +P+V+YSLNIAN+ +A ++V+AKPSLVA AGQTS+FFSG+EI AAAVSGG+GDSVS+++EVGVKLAV P+ LP+  +RL + A+RTFLT PS+SVVF+FRLDT+KTNVN+ V ++FGETLIL GL+E E + S DGVP L D+P +  LF+QR   ++ +S+LIL+TPRRP Y  Q   DR      M+E E+ L  LE R+ DW+ PR   D +RE+L   + F  EFR GDV+ E W         I     RL 
Sbjct:  314 GEFIDTGMVVVDVVLIGTQEDVRNSRGINLLNGLQLQFGDPLTGAAGFGYGSSRTKDFLNSGLAESTQTITRQISIPAVTYSLNIANSADANNQVLAKPSLVAQAGQTSEFFSGTEILAAAVSGGSGDSVSVQKEVGVKLAVTPEILPNDLIRLHVVAERTFLTDPSNSVVFEFRLDTTKTNVNSTVTMKFGETLILGGLSERETSRSADGVPGLMDIPLVKYLFSQRVERQFERSILILMTPRRPTYTRQGVADRAKADEKMTELERELKHLEQRHGDWYTPRPTFDLLREKLETQD-FFEEFRAGDVKIEAWQNDPDGQQHIASVRKRLL 644          
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Match: A0A2D6TQP4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D6TQP4_9PROT)

HSP 1 Score: 336 bits (861), Expect = 1.250e-106
Identity = 177/353 (50.14%), Postives = 246/353 (69.69%), Query Frame = 1
Query:   37 GAGLPGQPGFGQQ-----GAPGGFVDDKMVVVDVVLISTLENVNESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITRSLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAVSGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVFQFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGINLLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQLEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGAQIEQTINRLF 1080
            GAG+P  PG         GA   FV+  MVVVDVV+I T E+++ + G+NLL+GL LQFGDPLTNT G+S  T  ++          T T++  + +P+V+YSLNI N +++R+E++A PSLVALA + S+FFSG ++ AAAVSGG G S+S+ +++GVKL V P+FLPD KV+LQ+ A+RTFLTSPSSSV F+FRLDTS TNVNANVV+ FGETLILSGL+E E  NS D VP+L D+P +  LF+   + +YRKSVLI+LTPRR  Y  ++AE+R    + +S++EKSL   E RN +WF PR+   ++     + N    E+R GD + E W+ R++H  +++Q ++ LF
Sbjct:  318 GAGVPTIPGADTSDIEDLGADDSFVNSDMVVVDVVIIRTQEDISSNRGLNLLSGLELQFGDPLTNTAGWSFGTTNIDDNTSANSDTDTRTLSSLISIPAVNYSLNIFNTLDSRNEILASPSLVALANEKSEFFSGVDVVAAAVSGGDGSSISVNKQIGVKLGVTPEFLPDNKVKLQVEAERTFLTSPSSSVQFEFRLDTSNTNVNANVVMEFGETLILSGLSEKETENSRDAVPLLGDIPVMQYLFSNEAKRDYRKSVLIMLTPRRAQYANRSAEERARAESMLSDFEKSLSTFESRNENWFVPRATMADIVTTTGK-NALFNEYRTGDFQLESWNTRDTHEKRLKQALDFLF 669          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17541.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8I1MA08_9PROT5.090e-11355.89Uncharacterized protein n=3 Tax=Thalassospira TaxI... [more]
A0A850KKT0_9HYPH8.420e-11256.50Uncharacterized protein n=1 Tax=Methylocystaceae b... [more]
A0A199YKR4_9PROT1.320e-11155.29Uncharacterized protein n=11 Tax=Thalassospiraceae... [more]
A0A2G2R290_9PROT2.770e-11155.59Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A2N3L6J0_9PROT3.380e-11154.18Uncharacterized protein n=5 Tax=Thalassospira TaxI... [more]
A0A1Y2L9M4_9PROT1.820e-11053.63Uncharacterized protein n=2 Tax=Thalassospira alka... [more]
A0A2N3L0E5_9PROT1.860e-11054.65Uncharacterized protein n=7 Tax=Thalassospira TaxI... [more]
A0A154VF27_9PROT1.230e-10854.17Uncharacterized protein n=4 Tax=Thalassospira TaxI... [more]
A0A1Y2KWW4_9PROT1.980e-10754.22Uncharacterized protein n=1 Tax=Thalassospira meso... [more]
A0A2D6TQP4_9PROT1.250e-10650.14Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17541contigP-wetherbeei_contig17541:92..1177 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1177928.TH2_10134
PFAMsSecretin
Model size1086
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.28e-112
EggNOG OGsCOG0457@1|root,COG1450@1|root,COG0457@2|Bacteria,COG1450@2|Bacteria,1QXWT@1224|Proteobacteria,2TZR9@28211|Alphaproteobacteria,2JZ5G@204441|Rhodospirillales
DescriptionBacterial type II and III secretion system protein
Cds size1086
COG categoryNU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186119.4954517-CDS-P-wetherbeei_contig17541:91..11771683186119.4954517-CDS-P-wetherbeei_contig17541:91..1177Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17541 92..1177 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17541.1.1prot_P-wetherbeei_contig17541.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17541 92..1177 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17541.1.1

>prot_P-wetherbeei_contig17541.1.1 ID=prot_P-wetherbeei_contig17541.1.1|Name=mRNA_P-wetherbeei_contig17541.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=362bp
GGFPQPGGFPQQGAGLPGQPGFGQQGAPGGFVDDKMVVVDVVLISTLENV
NESYGVNLLNGLRLQFGDPLTNTPGFSRSTNGVNSALDPTLSVQTETITR
SLRLPSVSYSLNIANAVNARDEVIAKPSLVALAGQTSDFFSGSEIQAAAV
SGGAGDSVSIKQEVGVKLAVRPDFLPDGKVRLQISAQRTFLTSPSSSVVF
QFRLDTSKTNVNANVVLRFGETLILSGLTESEHTNSNDGVPVLRDLPGIN
LLFAQRNRSEYRKSVLILLTPRRPIYGAQAAEDRQAGVASMSEYEKSLMQ
LEGRNADWFRPRSVADEVREQLNRNNGFMREFRLGDVRSERWDKRESHGA
QIEQTINRLFI*
back to top

mRNA from alignment at P-wetherbeei_contig17541:92..1177+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17541.1.1 ID=mRNA_P-wetherbeei_contig17541.1.1|Name=mRNA_P-wetherbeei_contig17541.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig17541:92..1177+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGGTTTCCCGCAACCGGGCGGTTTCCCGCAGCAGGGCGCCGGATTGCC GGGACAACCGGGCTTCGGGCAGCAAGGCGCGCCCGGCGGCTTTGTCGACG ACAAGATGGTTGTGGTCGACGTTGTGCTTATCAGCACGCTCGAAAACGTG AACGAATCGTACGGCGTCAACCTGCTCAACGGCCTGCGCCTGCAGTTTGG CGACCCGCTCACCAACACGCCGGGCTTCAGCCGTTCGACCAACGGCGTCA ACAGCGCGCTCGATCCGACGCTCAGCGTGCAGACTGAAACGATCACGCGC AGTCTGCGCCTGCCGTCGGTCTCGTATTCGCTGAACATCGCCAACGCCGT CAACGCGCGCGATGAAGTCATCGCCAAGCCCAGCCTCGTTGCGCTGGCCG GCCAGACCTCCGACTTCTTTTCGGGGTCCGAGATTCAGGCCGCCGCGGTT TCGGGCGGTGCCGGCGATTCGGTGTCGATCAAGCAGGAAGTCGGCGTCAA GCTGGCCGTGCGTCCGGACTTTCTGCCGGACGGCAAGGTGCGGCTGCAGA TTTCCGCGCAGCGCACCTTCCTGACTTCGCCGTCGAGCTCGGTGGTGTTC CAGTTCCGCCTCGACACCAGCAAGACGAACGTGAACGCGAACGTGGTGCT GCGCTTCGGCGAAACGCTGATTCTGAGCGGCTTGACCGAGAGCGAGCACA CCAACTCCAACGACGGCGTGCCGGTCCTGCGCGACCTTCCCGGCATCAAC CTGCTGTTCGCGCAGCGCAACCGCAGCGAGTACCGCAAATCGGTGCTGAT ACTGTTGACGCCGCGCCGCCCGATTTACGGCGCGCAAGCGGCAGAAGACC GGCAGGCCGGCGTCGCCAGCATGAGCGAATACGAAAAAAGCCTGATGCAG CTCGAAGGCCGCAACGCGGACTGGTTCCGGCCGCGCTCGGTGGCCGACGA AGTGCGCGAGCAATTGAATCGCAACAACGGTTTCATGCGCGAATTCCGCC TCGGCGATGTCCGCTCGGAGCGCTGGGACAAGCGCGAAAGCCACGGCGCG CAAATTGAGCAGACGATCAACCGCCTGTTCATCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig17541:92..1177+

>mRNA_P-wetherbeei_contig17541.1.1 ID=mRNA_P-wetherbeei_contig17541.1.1|Name=mRNA_P-wetherbeei_contig17541.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig17541:92..1177+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGGTTTCCCGCAACCGGGCGGTTTCCCGCAGCAGGGCGCCGGATTGCC
GGGACAACCGGGCTTCGGGCAGCAAGGCGCGCCCGGCGGCTTTGTCGACG
ACAAGATGGTTGTGGTCGACGTTGTGCTTATCAGCACGCTCGAAAACGTG
AACGAATCGTACGGCGTCAACCTGCTCAACGGCCTGCGCCTGCAGTTTGG
CGACCCGCTCACCAACACGCCGGGCTTCAGCCGTTCGACCAACGGCGTCA
ACAGCGCGCTCGATCCGACGCTCAGCGTGCAGACTGAAACGATCACGCGC
AGTCTGCGCCTGCCGTCGGTCTCGTATTCGCTGAACATCGCCAACGCCGT
CAACGCGCGCGATGAAGTCATCGCCAAGCCCAGCCTCGTTGCGCTGGCCG
GCCAGACCTCCGACTTCTTTTCGGGGTCCGAGATTCAGGCCGCCGCGGTT
TCGGGCGGTGCCGGCGATTCGGTGTCGATCAAGCAGGAAGTCGGCGTCAA
GCTGGCCGTGCGTCCGGACTTTCTGCCGGACGGCAAGGTGCGGCTGCAGA
TTTCCGCGCAGCGCACCTTCCTGACTTCGCCGTCGAGCTCGGTGGTGTTC
CAGTTCCGCCTCGACACCAGCAAGACGAACGTGAACGCGAACGTGGTGCT
GCGCTTCGGCGAAACGCTGATTCTGAGCGGCTTGACCGAGAGCGAGCACA
CCAACTCCAACGACGGCGTGCCGGTCCTGCGCGACCTTCCCGGCATCAAC
CTGCTGTTCGCGCAGCGCAACCGCAGCGAGTACCGCAAATCGGTGCTGAT
ACTGTTGACGCCGCGCCGCCCGATTTACGGCGCGCAAGCGGCAGAAGACC
GGCAGGCCGGCGTCGCCAGCATGAGCGAATACGAAAAAAGCCTGATGCAG
CTCGAAGGCCGCAACGCGGACTGGTTCCGGCCGCGCTCGGTGGCCGACGA
AGTGCGCGAGCAATTGAATCGCAACAACGGTTTCATGCGCGAATTCCGCC
TCGGCGATGTCCGCTCGGAGCGCTGGGACAAGCGCGAAAGCCACGGCGCG
CAAATTGAGCAGACGATCAACCGCCTGTTCATCTGA
back to top