mRNA_P-wetherbeei_contig17505.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: UPI00124BC522 (ABC transporter substrate-binding protein n=1 Tax=Lacisediminimonas profundi TaxID=2603856 RepID=UPI00124BC522) HSP 1 Score: 290 bits (743), Expect = 2.000e-94 Identity = 146/226 (64.60%), Postives = 179/226 (79.20%), Query Frame = 1
Query: 10 MIAATAAAAAGSHATAQAQDIKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADYKKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
++AA AA + A AQ IKIGV+ P +G +ASIGQ +K L++ KE+N AGGI+GRK+ L++ED E+NPA ATQ+AEKLFQ KVDFLTGTV+SG TLAVGQVAERN+RL+ATTVSFS+AITG++CSPNVFRVN AG Q++ALA W A K GAK++YLGPDYEMGRST+A FK AE GA + GEV+ PL +KDYS FFGQ+RAARPDV+Y S G D+
Sbjct: 10 LLAALVGAAFCTSAAAQTGPIKIGVVTPLSGTYASIGQQVKWGLELATKEVNAAGGIMGRKIELLFEDEEANPAVATQKAEKLFQSAKVDFLTGTVNSGSTLAVGQVAERNSRLIATTVSFSDAITGDKCSPNVFRVNAKAGQQSAALAAWLAKEKPGAKVFYLGPDYEMGRSTVAAFKAAAEKAGAKSVGEVFPPLDSKDYSPFFGQLRAARPDVVYTSVAGNDT 235
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: A0A1D2SJ00_9BURK (ABC transporter substrate-binding protein n=1 Tax=Lautropia sp. SCN 69-89 TaxID=1660104 RepID=A0A1D2SJ00_9BURK) HSP 1 Score: 285 bits (730), Expect = 1.630e-92 Identity = 143/220 (65.00%), Postives = 178/220 (80.91%), Query Frame = 1
Query: 31 AAAGSHATAQAQD-IKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADYKKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
AAAG+ + QA D I+IGV+ P +G +A IG+ +K +++ KE+NDAGGI GRK+ L ED E+NPA ATQ+AEKLFQV KVDFLTGTV+SG TLAVGQ+AERN+RL+ATTVSFS+ ITGE+CSPNVFRVN SAGMQ++ALA W A K A+++YLGPDYEMGRST+A F+ AE GA ++GE++APLG+KDYS FFGQIR+ARP VLY S G D+
Sbjct: 12 AAAGATSGVQAADPIRIGVVTPLSGTYAPIGEQVKRGIELAAKEINDAGGIAGRKIELSIEDEEANPAVATQKAEKLFQVGKVDFLTGTVNSGSTLAVGQLAERNDRLIATTVSFSDVITGEKCSPNVFRVNASAGMQSAALAEWLAREKPKARVFYLGPDYEMGRSTVAAFRSVAEQKGASSTGELFAPLGSKDYSPFFGQIRSARPTVLYTSVAGNDT 231
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: A0A366HH13_9BURK (Amino acid/amide ABC transporter substrate-binding protein (HAAT family) n=1 Tax=Eoetvoesia caeni TaxID=645616 RepID=A0A366HH13_9BURK) HSP 1 Score: 285 bits (730), Expect = 1.900e-92 Identity = 142/227 (62.56%), Postives = 178/227 (78.41%), Query Frame = 1
Query: 7 IMIAATAAAAAGSHATAQAQDIKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADYKKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
I+IA AA AG+ A A+ IKIGVL P +G +AS+GQ ++ +++ KE+NDAGG++GRK+ L++ED E+NP+ AT +AEKLFQV KVDFLTGTV S TLAVGQVAERN RL+ATTVSFS+AITG++CSPNVFRVN AG Q+ ALA W ++ + A+++YLGPDYEMGRST+ FK AEA GA T GEV+APL KDYS FFGQIRAARP+V+Y S G D+
Sbjct: 10 IIIATLAAGFAGTVAAQSAEPIKIGVLTPLSGTYASLGQQVRWGIELATKEINDAGGVMGRKIELLFEDEEANPSVATPKAEKLFQVSKVDFLTGTVSSASTLAVGQVAERNERLIATTVSFSDAITGDKCSPNVFRVNAKAGQQSVALAEWLSNARPNAEVFYLGPDYEMGRSTVHAFKTAAEAKGAKTVGEVFAPLDNKDYSPFFGQIRAARPNVMYTSVAGNDT 236
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: A0A2U1VV50_9PROT (ABC transporter substrate-binding protein n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VV50_9PROT) HSP 1 Score: 285 bits (730), Expect = 1.900e-92 Identity = 139/209 (66.51%), Postives = 173/209 (82.78%), Query Frame = 1
Query: 61 AQDIKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADYKKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
A+ I+IGV+ P +G +A IGQ ++ L++ KE+N AGGILGR + L++ED E+NPA ATQ+AEKLFQV+KVDFLTGTV+SG TLAVGQ+AERN RL+ATTVSFS+AIT ++CSPNVFRVN AG Q++ALA W A K AK+YYLGPDYEMGRST+A FK+ AE GA ++GEV+APLG+KDYSQ+FGQ+RAARP VLY ST G D+
Sbjct: 24 AEPIRIGVVTPLSGTYAPIGQQVRWGLELATKEVNAAGGILGRPVELLFEDEEANPAVATQKAEKLFQVNKVDFLTGTVNSGSTLAVGQLAERNGRLIATTVSFSDAITTDKCSPNVFRVNARAGQQSAALAQWLAKDKPKAKVYYLGPDYEMGRSTVAAFKEAAEKTGAQSTGEVFAPLGSKDYSQYFGQLRAARPSVLYTSTAGNDT 232
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: A0A353YAN9_9BURK (Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Curvibacter sp. TaxID=1888168 RepID=A0A353YAN9_9BURK) HSP 1 Score: 285 bits (728), Expect = 3.280e-92 Identity = 140/213 (65.73%), Postives = 169/213 (79.34%), Query Frame = 1
Query: 49 ATAQAQDIKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADYKKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
A AQ+ I+IGV+ P +G +A IGQ +K LDM KE+N AGG++GR+L L+YED E+NPA A Q+AEKLFQV KVDFLTGTV+SG TLAVGQVAERNNRL+ATTVSF+++IT ++CSPNVFRVN AGMQ++ALA W A K A ++YLGPDYEMGRST+A FK AE GA T GEV+APL KDYS FFGQIR+ARP V+Y S G D+
Sbjct: 19 ALAQSGPIRIGVVTPLSGTYAGIGQQVKWGLDMAAKEINTAGGVMGRQLELIYEDEEANPAVAVQKAEKLFQVGKVDFLTGTVNSGSTLAVGQVAERNNRLIATTVSFADSITADKCSPNVFRVNARAGMQSAALAEWMASTKPNANVFYLGPDYEMGRSTVAAFKSAAEGKGAKTVGEVFAPLDNKDYSPFFGQIRSARPAVIYTSVAGNDT 231
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: A0A0F2KT81_9PROT (ABC transporter substrate-binding protein n=16 Tax=Azospirillum TaxID=191 RepID=A0A0F2KT81_9PROT) HSP 1 Score: 284 bits (727), Expect = 5.400e-92 Identity = 137/209 (65.55%), Postives = 173/209 (82.78%), Query Frame = 1
Query: 61 AQDIKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADYKKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
A+ I+IGV+ P +G +A IGQ ++ L++ KE+N AGG++GR++ L++ED E+NPA ATQ+AEKLFQV+KVDFLTGTV+SG TLAVGQ+AERN RL+ATTVSFS+AIT ++CSPNVFRVN AG Q++ALA W A K AK+YYLGPDYEMGRST+A FK AE GA ++GEV+APLG+KDYSQ+FGQ+RAARP VLY ST G D+
Sbjct: 24 AEPIRIGVVTPLSGTYAPIGQQVRWGLELATKEVNAAGGVMGRQIELLFEDEEANPAVATQKAEKLFQVNKVDFLTGTVNSGSTLAVGQLAERNGRLIATTVSFSDAITTDKCSPNVFRVNARAGQQSAALAEWLAKDKPKAKVYYLGPDYEMGRSTVAAFKAAAEKTGAQSTGEVFAPLGSKDYSQYFGQLRAARPSVLYTSTAGNDT 232
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: A0A7U4Z8H7_9RHOB (Branched-chain amino acid ABC transporter, periplasmic binding protein n=1 Tax=Planktomarina temperata RCA23 TaxID=666509 RepID=A0A7U4Z8H7_9RHOB) HSP 1 Score: 284 bits (726), Expect = 6.370e-92 Identity = 140/215 (65.12%), Postives = 171/215 (79.53%), Query Frame = 1
Query: 43 SHATAQAQDIKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADYKKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
S A AQ + IKIGVL P +G +A IGQ ++ +D V+E+N AGGI GR++ L+YED E+NPA A +AEKLF VD VDFLTGTV+SG TLAVGQVA+R ++L+ATTVSFS+AITG CSPNVFRVN AG Q+ ALA W K GAK+YYLGPDYEMGRST+A FK+ AE++GA ++GEV+APL +KDYSQ+FGQ+RAARPDVLY S G DS
Sbjct: 17 SSAYAQ-ETIKIGVLTPLSGTYAGIGQQVRWGIDQSVEEINAAGGIAGRQIELIYEDSEANPAVAVTKAEKLFTVDNVDFLTGTVNSGATLAVGQVADRADKLIATTVSFSDAITGSGCSPNVFRVNARAGQQSVALAAWLKQEKPGAKVYYLGPDYEMGRSTVAAFKERAESVGATSTGEVFAPLDSKDYSQYFGQLRAARPDVLYTSVAGNDS 230
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: A0A522GK63_9BURK (Branched-chain amino acid ABC transporter substrate-binding protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A522GK63_9BURK) HSP 1 Score: 284 bits (726), Expect = 9.750e-92 Identity = 146/234 (62.39%), Postives = 176/234 (75.21%), Query Frame = 1
Query: 10 MIAATAAAAAGSHATAQAQD---IKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADY-----KKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
++AA A A A AQD +KIGVL P +G FA IGQ +K +++ E+N AGGI+GRK+ LV+EDGE+NPA TQ+AEKLFQ KVDFLTGTV+SG+TLAVGQ+AERNNRL+ATTVSFS+AITG+ CSPNVFRVN AG Q +AL W A + K AK++YLGPDYEMGRST+A F+ AEA GA T GEV+APLG KDYS FFGQIRAA PD++Y S G D+
Sbjct: 11 VLAAVLAGFASFSGLAAAQDTAPLKIGVLTPLSGTFAPIGQQVKWGVELATNEINAAGGIMGRKIQLVFEDGEANPAVGTQKAEKLFQSSKVDFLTGTVNSGLTLAVGQIAERNNRLMATTVSFSDAITGKECSPNVFRVNARAGQQTAALVQWLAKWMTAHGKPNAKVFYLGPDYEMGRSTVATFRAAAEAKGAKTVGEVFAPLGNKDYSPFFGQIRAAHPDIMYTSVAGNDT 244
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: A0A315EPL9_9BURK (Branched-chain amino acid ABC transporter substrate-binding protein n=3 Tax=Comamonadaceae TaxID=80864 RepID=A0A315EPL9_9BURK) HSP 1 Score: 283 bits (723), Expect = 1.810e-91 Identity = 142/226 (62.83%), Postives = 173/226 (76.55%), Query Frame = 1
Query: 10 MIAATAAAAAGSHATAQAQDIKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADYKKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
+I A AAA A AQ I++GV+ P +G +A IGQ +K LD+ KE+N GG++GR + LVYED E+NPA A Q+AEKLFQV KVDFLTGTV+SG TLAVGQVAERNNRL+ATTVSF+++ITG++CSPNVFRVN AGMQ++ALA W A K A ++YLGPDYEMGRST+A FK AE GA T GEV+APL KDYS FFGQ+R+ARP V+Y S G D+
Sbjct: 5 LIPALIAAAVSVAAQAQTGPIRVGVVTPLSGTYAGIGQQVKWGLDLAAKEINAGGGVMGRSIELVYEDEEANPAVAVQKAEKLFQVGKVDFLTGTVNSGSTLAVGQVAERNNRLIATTVSFADSITGDKCSPNVFRVNARAGMQSAALADWMAATKPNANVFYLGPDYEMGRSTVAAFKSAAEGKGAKTVGEVFAPLDNKDYSPFFGQMRSARPTVVYTSVAGNDT 230
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Match: K0IC97_9BURK (Extracellular ligand-binding receptor n=11 Tax=Comamonadaceae TaxID=80864 RepID=K0IC97_9BURK) HSP 1 Score: 283 bits (723), Expect = 1.870e-91 Identity = 138/215 (64.19%), Postives = 172/215 (80.00%), Query Frame = 1
Query: 43 SHATAQAQDIKIGVLPPFTGPFASIGQVIKVALDMRVKELNDAGGILGRKLVLVYEDGESNPATATQRAEKLFQVDKVDFLTGTVHSGVTLAVGQVAERNNRLLATTVSFSNAITGERCSPNVFRVNPSAGMQASALALWAADYKKGAKIYYLGPDYEMGRSTIAEFKKEAEALGAVTSGEVYAPLGAKDYSQFFGQIRAARPDVLYMSTGGTDS 687
S A AQ Q I+IGV+ P +G +A IGQ +K LD+ +++N AGG+ GR+L LVYED E+NPA A Q+AEKLFQV+KVDFLTGTV+SG TLAVGQVAERNNRL+ATTVSF+++ITG++CSPNVFRVN AGMQ++ALA W A + A ++YLGPDYEMGRST+A FK AEA GA + GEV+APL KDYS FFGQ+R++RP V+Y S G D+
Sbjct: 17 SSAAAQNQPIRIGVVTPLSGTYAGIGQQVKWGLDLAARQINAAGGVAGRQLELVYEDEEANPAVAVQKAEKLFQVNKVDFLTGTVNSGATLAVGQVAERNNRLIATTVSFADSITGDKCSPNVFRVNARAGMQSAALADWIARTRPNANVFYLGPDYEMGRSTVAAFKSAAEAKGAKSVGEVFAPLDNKDYSPFFGQMRSSRPAVIYTSVAGNDT 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17505.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17505.1.1 >prot_P-wetherbeei_contig17505.1.1 ID=prot_P-wetherbeei_contig17505.1.1|Name=mRNA_P-wetherbeei_contig17505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp MIAATAAAAAGSHATAQAQDIKIGVLPPFTGPFASIGQVIKVALDMRVKEback to top mRNA from alignment at P-wetherbeei_contig17505:1..687- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17505.1.1 ID=mRNA_P-wetherbeei_contig17505.1.1|Name=mRNA_P-wetherbeei_contig17505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig17505:1..687- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17505:1..687- >mRNA_P-wetherbeei_contig17505.1.1 ID=mRNA_P-wetherbeei_contig17505.1.1|Name=mRNA_P-wetherbeei_contig17505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig17505:1..687- (Phaeothamnion wetherbeei SAG_119_79)back to top |