mRNA_P-wetherbeei_contig1750.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1750.2.1
Unique NamemRNA_P-wetherbeei_contig1750.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 3.390e-37
Identity = 110/307 (35.83%), Postives = 157/307 (51.14%), Query Frame = 3
Query:  315 GTLTGVVYEFVNSDTTTTKRLVLDITSKVYLANSEGMFDIAFHPNYAATKIFYAFYSFLAGGKH----WTRLSQFKYIDGQVAQT-GNTETQLLNIQQTRTVHKAGAIVIH-------EG---QLYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVSDTGAVTG---------TGFSGPNKLIFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFAG---GGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACP--AFTGNCVIGGVVYRGKRYPKLV 1148
            G +TG +    + D T     VLDI+ +   +  +G+   AF P++  T +FY  YS +AG  +      RLS+F Y  G V  T G+ E  L + ++  +VH +G +          EG    +Y ++GDGG  +DPD +AQD T+L G ++R+ V  T   TG          G +G    I A G RNPH+   D+AT EL+ GDVGQ   EE++V++      K++GW M+EG RCN  F G   G C  L  A    P F+YCH       ++  AC     TG  VIGG VYRG +Y  ++
Sbjct:  202 GGMTGYIKMAASQDPTDAID-VLDISDRADFSYEQGLLGFAFSPSFTETGLFYVSYS-VAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHDIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPAGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECG----KDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVFEYCHVDYDSSQEEFDACGDRTVTGLSVIGGHVYRGAKYDDIL 502          
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: A0A835ZHD3_9STRA (Sorbosone dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHD3_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.100e-35
Identity = 104/289 (35.99%), Postives = 149/289 (51.56%), Query Frame = 3
Query:  327 GVVYEFVNSDTTTTKRLVLDITSKVYLANSE-GMFDIAFHPNYAATKIFYAFYSFLAGGKHWTRLSQFKYIDGQVAQTGNTETQLLNIQQTRTVHKAGAIVIH-------EGQ----LYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVSDTGAVTGTGFS----------GPNKLIFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFAGGGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACPAFTGNCVIGGVVYRG 1127
            G ++E  +    T+ RLVLDITS+V     E G+  +AF P+++ TK FY  Y      +  T +++  + +G +  TGN E +LL   Q    H  G ++         EG+    LY+S GDGGGDDDP R  Q  T+ LGK+LR+++S    V+ +GFS          G   LI+A G RNP K T D+ T  L+ GDVGQ + EE  ++       +N+GW  +EG    +N    G D + +     P ++YCH        D  AC +  G C+IGG VYRG
Sbjct:  168 GKIFEVPHDPLATSMRLVLDITSRVNQGGGELGLLGLAFSPDFSTTKRFYINY---VDNEMETVIARHVH-NGHMRGTGNVEARLLQFHQPSENHNGGTLLFKPSDIEHPEGKDHYDLYISTGDGGGDDDPHRNGQSLTTNLGKILRLRISSD--VSESGFSIPADNMRSNDGKLTLIYALGMRNPWKCTFDATTDLLYCGDVGQEAVEEFDIIYIG----QNYGWSNYEGTHL-LN----GPDAILYN----PVYEYCH-------SDTAACASVVGECIIGGYVYRG 430          
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: A0A524D0R2_9ARCH (Glucose sorbosone dehydrogenase n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A524D0R2_9ARCH)

HSP 1 Score: 140 bits (353), Expect = 2.210e-34
Identity = 96/284 (33.80%), Postives = 143/284 (50.35%), Query Frame = 3
Query:  327 GVVYEFVNSDTTTTKRLVLDITSKVYLANSEGMFDIAFHPNYAATKIFYAFYSFLAGGKHWTRLSQFKYIDGQVAQTG-NTETQLLNIQQTRTVHKAGAIVI-HEGQLYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVSDTGAVTGTGFSGP--------NKLIFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFAGGGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACPAFTGNCVIGGVVYRGKRYPKLV 1148
            G++Y F N+++T TK L LD++  +      G+  +AFHPN+ +   F+  Y+    G   T +S+FK  +  +     ++E   L + Q  + H  G I    +  LY+SLGDGGG  DPD+  Q+  + LG +LR+ V D+G+        P         + IFA GFRNP + + DS TG+LW GDVGQ+S EE+ +++      KN+GW   EGF   V    GG + ++   V PP F+Y H                 G  + GG VYRG     L+
Sbjct:   71 GLIYTFQNNESTNTKNLFLDLSDDISTGGERGLLGLAFHPNFTSNGYFFVDYTDEGTGN--TIISRFKVNETNLNLANKSSEYTFLEVTQPYSNHNGGQIQFGSDAYLYISLGDGGGVGDPDQNGQNRMTQLGAILRIDV-DSGSPYSIPTDNPFYGNVNGWAEEIFAFGFRNPWRFSFDSLTGDLWAGDVGQNSWEEIDIVEKG----KNYGWNTKEGFHDYV----GGVNNVT--PVEPPIFEYGHD---------------IGISITGGYVYRGSSLTDLI 326          
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: UPI0019E6F6CC (PQQ-dependent sugar dehydrogenase n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019E6F6CC)

HSP 1 Score: 144 bits (362), Expect = 3.350e-34
Identity = 100/269 (37.17%), Postives = 137/269 (50.93%), Query Frame = 3
Query:  381 LDITSKVYLANSEGMFDIAFHPNYAATKIFYAFYSFLAGGKHWTRLSQFKYIDGQVAQTGNTETQLLNIQQ-TRTVHKAGAIVIH-EGQLYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVSDTGAVT-GTGFSGP-----------NKLIFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFAGGGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACPAFTGNCVIGGVVYRGKRYPKL 1145
            LDI+S+V     EG+  +AF PNYA+T+  YA+Y+   G      LS+F+      A   ++ET LL I   T T H  G +    +G LY+S+GDGGG  DPD  AQ+  SLLGKVLR+ V   G  T     S P              I+A G RNP +++ D  TG+L+I DVGQS+REE++     S   +N+GW + EG    + +AGG     S + +TPP  +Y H                 G  + GG VYRG  +  L
Sbjct:  361 LDISSRVKSGGEEGLLSLAFSPNYASTRRLYAYYTNQNGD---IVLSRFQANASGTAADPSSETVLLTIPHPTYTNHNGGKLAFGPDGYLYVSVGDGGGGGDPDNNAQNPGSLLGKVLRLDVESPGVATYAIPASNPFLAATDPSDRYRDEIWALGLRNPWRLSFDRQTGDLYIADVGQSAREEVNFQPAASRGGENYGWKILEG---TIPYAGG-----STSGLTPPLLEYDH--------------VQGGRSITGGYVYRGNEFQSL 604          
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: A0A846P9Z7_9BACT (Glucose sorbosone dehydrogenase n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A846P9Z7_9BACT)

HSP 1 Score: 139 bits (350), Expect = 5.920e-34
Identity = 100/289 (34.60%), Postives = 144/289 (49.83%), Query Frame = 3
Query:  327 GVVYEFVNSDTTTTKRLVLDITSKVYLA-NSEGMFDIAFHPNYAATKIFYAFYSFLAGGKHWTRLSQFKYIDGQV-AQTGNTETQLLNIQQTRTVHKAGAIVIH-EGQLYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVSDTGAVTGTGFSGP------------NKLIFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFAGGGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACPAFTGNCVIGGVVYRGKRYPKLV 1148
            G +  F NS +  + ++ LDI  +V  A N +G+  +AFHP+Y +   FYA+YS        TRLS+F+   G   A   ++E  LL+I Q  + H  G I    +G LY+++GDGGG  DP    QD+TSLLG +LR+ V      TG  F+ P             + I+A G RNP + + D  TG LW GDVGQ++ EE+ ++++      N+GW + EG  C       GCD      +  P ++Y H                 G  + GG VYRG   P+LV
Sbjct:   68 GRIIVFENSPSVNSSKVFLDIRGRVNDAGNEQGLLGLAFHPSYTSNGHFYAYYS----ATDSTRLSRFQVSGGDPDAADPSSEKVLLSIYQPFSNHNGGQIAFGPDGDLYIAVGDGGGAGDPLENGQDQTSLLGSILRIDVD-----TGNPFTIPPDNPYAGNTQGFREEIYAYGLRNPWRFSFDPVTGWLWAGDVGQNAIEEVDIVESGG----NYGWDVMEGSSCFE--PSSGCDQTD---LILPVWEYPHS---------------VGRSITGGYVYRGTAIPELV 323          
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: UPI001F3486E1 (PQQ-dependent sugar dehydrogenase n=1 Tax=Dyadobacter sp. CY356 TaxID=2906442 RepID=UPI001F3486E1)

HSP 1 Score: 140 bits (354), Expect = 2.030e-33
Identity = 90/261 (34.48%), Postives = 133/261 (50.96%), Query Frame = 3
Query:  399 VYLANSEGMFDIAFHPNYAATKIFYAFYSFLAGGKHWTRLSQFKYIDGQ--VAQTGNTETQLLNIQQTRTVHKAGAIVI-HEGQLYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVS--DTGAVTGTGFSGPNKL-------IFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFAGGGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACPAFTGNCVIGGVVYRGKRYPKL 1145
            +     +G+  +AFHPNYA   +F+ +Y+    G+    ++++K   G   +A   +    L         H  G +    +G LYLS+GDGGG +DPD  AQD   LLGK+LR+ VS  DTG    T    P  +       ++A G RNP + + DS TG++WIGDVGQS+ EE++   T++TS  N+GW  +EG            D +  +A       Y  P        K A  +  G+ V+GGVVYRG +YP++
Sbjct:   88 ILTTGEQGLLSLAFHPNYATNGLFFVYYT---NGEGNLEIARYKISAGSQNIADPASKLVVLTVPHPGEENHNGGELHFGKDGNLYLSIGDGGGGNDPDNNAQDPAKLLGKILRITVSTTDTGLPYTTPSDNPYPVGSITKNEVYATGLRNPFRWSFDSETGDMWIGDVGQSAFEEINYRTTSTTSGANYGWGCYEG------------DAIHNSADCIDGAQYHFP------VHKYATNSAAGSSVVGGVVYRGAKYPEM 327          
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: A0A7Y3DA52_9DELT (Glucose dehydrogenase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3DA52_9DELT)

HSP 1 Score: 139 bits (350), Expect = 3.130e-33
Identity = 97/268 (36.19%), Postives = 135/268 (50.37%), Query Frame = 3
Query:  381 LDITSKVYLANSEGMFDIAFHPNYAATKIFYAFYSFLAGGKHWTRLSQFKYIDGQVAQTGNTETQLLNIQQTRTVHKAGAIVIH-EGQLYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVSDTGA-----VTGTGFS-----------GPNKLIFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCN-VNFAGGGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACPAFTGNCVI-GGVVYRG 1127
            LD+  +V     +G+F +AF P+Y  + IF+  Y+  +G    + LS+F     +  +   TET LL I Q    H  G +    +G LYLS GDGG  +DP  +AQD T LLGK+LR+ V+   A     V G G++           G    I+A G RNP + + D  TG+LWI DVGQ++REE+          +N+GW + EG RCN V+ A         A++T P F+Y H G               GNC I GG V+RG
Sbjct:   82 LDLRDRVATNGEQGLFSMAFAPDYEDSGIFFVMYNDASGA---SVLSRFSLAPDEPDRADPTETVLLTIPQPYRNHNGGTVAFGADGFLYLSAGDGGDSNDPGERAQDPTELLGKMLRLDVAVPPAPGSIPVAGAGYAIPADNPFVGVAGVRPEIWAFGLRNPFRFSFDRVTGDLWIADVGQNAREEIDFEPADDPGGRNYGWDIEEGTRCNPVDPAPA--PPCGDASLTRPIFEYTHGG---------------GNCSITGGFVHRG 329          
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: A0A1F5J961_9BACT (GSDH domain-containing protein n=1 Tax=Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21 TaxID=1797756 RepID=A0A1F5J961_9BACT)

HSP 1 Score: 139 bits (350), Expect = 5.330e-33
Identity = 92/264 (34.85%), Postives = 135/264 (51.14%), Query Frame = 3
Query:  381 LDITSKVYLANSEGMFDIAFHPNYAATKIFYAFYSFLAGGKHWTRLSQFKYIDGQVAQTGNTETQLLNIQQTRTVHKAGAIVI--HEGQLYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVSD----TGAVTGTGFSGPNKL--IFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFAGGGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACPAFTGNC-VIGGVVYRGKRYPKL 1145
            L+I  KV      G+  +AFHPNYA+   FY  Y+  +G    T ++++K          ++E  ++ + Q  + H  G +    ++  LY+ +GDGG  +DPD +AQ+  + LGK+LR+ V +    + A      + P+ L  I+A GFRNP + + D   G+L+IGDVGQ SREE+S     S   +N+GW   EGF+C  N  G  C++  W     P +DY H G               GNC V GG VYRG   P L
Sbjct:   75 LNIDPKVGSGGEMGLLGLAFHPNYASNGYFYVNYTDNSGD---TVVARYKVSSNPDIADPSSEQIMMTVDQPFSNHNGGMMAFSPNDDHLYIGMGDGGSGNDPDNRAQNGQTELGKILRIDVGNGDTFSAAANNPFNNNPSFLDTIWALGFRNPWRYSFDRLNGDLYIGDVGQGSREEISFQPGNSQGGENYGWRCMEGFQC-TNLPGCACNSPQWIN---PIYDYGHAG---------------GNCSVTGGYVYRGPAIPDL 316          
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: A0A2S6I562_9BACT (Putative secreted protein (Por secretion system target) n=1 Tax=Lewinella xylanilytica TaxID=1514080 RepID=A0A2S6I562_9BACT)

HSP 1 Score: 137 bits (345), Expect = 1.340e-32
Identity = 99/266 (37.22%), Postives = 127/266 (47.74%), Query Frame = 3
Query:  375 LVLDITSKVYLANSEGMFDIAFHPNYAATKIFYAFYSFLA---GGKHWTRLSQFKYIDGQVAQTGNTETQLLNIQQTRTVHKAGAIVIH-EGQLYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVSDTGAVTGTGFSGPNKL---------IFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFA--GGGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACPAFTGNCVIGGVVYRG 1127
            +VLD+T  V      G   +AFHPNY  +   Y  Y+  A   GG   TR+S+F   +  + +  + E  LL I Q  T H AG +    +G LY+  GDGGG DD    AQD TSLLGK+LR+ V  T A T       N           I+A G RNP +++ D  +G LWIGDVGQ  REE++ L     +  NFGW   EGF   + F+     CD  + A  T P  DY H                 G  + GG VYRG
Sbjct:   70 IVLDLTGLVDARGEGGALGMAFHPNYPDSNYLYVNYTSPAEQLGGVMTTRISRFTLDNAGIVEDVS-ERILLRIPQPATNHNAGDLAFGPDGLLYIPTGDGGGADDEFDNAQDPTSLLGKMLRIDVDSTTATTNYVIPATNPYDSAADTLPEIWAMGLRNPWRISFDRESGGLWIGDVGQGVREEVNYLPAGEGAGTNFGWNCREGF---IAFSDPSSRCDDRTAADFTEPVLDYAHDN----------SERVNGLSITGGFVYRG 321          
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Match: A0A3B1CRK0_9ZZZZ (GSDH domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1CRK0_9ZZZZ)

HSP 1 Score: 134 bits (338), Expect = 3.550e-32
Identity = 96/267 (35.96%), Postives = 131/267 (49.06%), Query Frame = 3
Query:  381 LDITSKVYLANSEGMFDIAFHPNYAATKIFYAFYSFLAGGKHW--TRLSQFKYIDGQVAQTGNTETQLLNIQQTRTVHKAGAIVIH-EGQLYLSLGDGGGDDDPDRQAQDETSLLGKVLRMKVSDTGAVTGTGFSGPNKL---------IFAKGFRNPHKMTVDSATGELWIGDVGQSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFAGGGCDTLSWAAVTPPSFDYCHPGVGMGAKDKKACPAFTGNCVIGGVVYRGKRYPKL 1145
            L+I S+V     EG+  +AFHPN+   + F+  Y+  A GK    +R+S+F   D         E  LL I Q    H  G +    +G+LY+ +GDGG  +DP R AQ+  SLLGK+LR+ V         G    N           I+A G RNP + + DS TG+L++GDVGQ+ REE+++LK      +N+GW + EG  C        CD   +AA   P  DY               P   G  VIGG VYRGK  P+L
Sbjct:   93 LNIQSRVSSGYEEGLLGLAFHPNFKKNRRFFIHYT--ASGKTGIESRISEFMAEDNLKTAKIQNEKVLLRISQPFRNHNGGDLAFGPKGKLYIGMGDGGAGNDPQRNAQNLGSLLGKMLRIDVDQQNDAKTYGIPEDNPFRTQTRVAPEIWASGLRNPWRFSFDSETGDLYVGDVGQTGREEINLLKRG----ENYGWNIMEGTICTPR-VDLPCDPSQYAA---PIHDY---------------PRGEGTVVIGGYVYRGKTIPRL 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1750.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJP1_ECTSI3.390e-3735.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHD3_9STRA1.100e-3535.99Sorbosone dehydrogenase-domain-containing protein ... [more]
A0A524D0R2_9ARCH2.210e-3433.80Glucose sorbosone dehydrogenase n=1 Tax=Candidatus... [more]
UPI0019E6F6CC3.350e-3437.17PQQ-dependent sugar dehydrogenase n=1 Tax=Synechoc... [more]
A0A846P9Z7_9BACT5.920e-3434.60Glucose sorbosone dehydrogenase n=1 Tax=Candidatus... [more]
UPI001F3486E12.030e-3334.48PQQ-dependent sugar dehydrogenase n=1 Tax=Dyadobac... [more]
A0A7Y3DA52_9DELT3.130e-3336.19Glucose dehydrogenase n=1 Tax=Myxococcales bacteri... [more]
A0A1F5J961_9BACT5.330e-3334.85GSDH domain-containing protein n=1 Tax=Candidatus ... [more]
A0A2S6I562_9BACT1.340e-3237.22Putative secreted protein (Por secretion system ta... [more]
A0A3B1CRK0_9ZZZZ3.550e-3235.96GSDH domain-containing protein n=1 Tax=hydrotherma... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1750contigP-wetherbeei_contig1750:1278..6515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FJP1
PFAMsGSDH
Model size1150
Max annot lvl2759|Eukaryota
KEGG koko:K21430
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0031224,GO:0031225,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0046658,GO:0071944
Exons10
Evalue2.31e-36
EggNOG OGsCOG2133@1|root,2QQKP@2759|Eukaryota
Descriptionscavenger receptor activity
Cds size726
COG categoryG
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1750.2.1prot_P-wetherbeei_contig1750.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1750 1278..4032 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186118.6383045-CDS-P-wetherbeei_contig1750:1277..13061683186118.6383045-CDS-P-wetherbeei_contig1750:1277..1306Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1750 1278..1306 -
1683186118.6489432-CDS-P-wetherbeei_contig1750:1624..17921683186118.6489432-CDS-P-wetherbeei_contig1750:1624..1792Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1750 1625..1792 -
1683186118.6572108-CDS-P-wetherbeei_contig1750:2190..22711683186118.6572108-CDS-P-wetherbeei_contig1750:2190..2271Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1750 2191..2271 -
1683186118.6655903-CDS-P-wetherbeei_contig1750:2652..27841683186118.6655903-CDS-P-wetherbeei_contig1750:2652..2784Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1750 2653..2784 -
1683186118.673965-CDS-P-wetherbeei_contig1750:3059..31861683186118.673965-CDS-P-wetherbeei_contig1750:3059..3186Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1750 3060..3186 -
1683186118.6821246-CDS-P-wetherbeei_contig1750:3509..36781683186118.6821246-CDS-P-wetherbeei_contig1750:3509..3678Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1750 3510..3678 -
1683186118.6909616-CDS-P-wetherbeei_contig1750:4012..40321683186118.6909616-CDS-P-wetherbeei_contig1750:4012..4032Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1750 4013..4032 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186118.7025752-UTR-P-wetherbeei_contig1750:4032..41311683186118.7025752-UTR-P-wetherbeei_contig1750:4032..4131Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1750 4033..4131 -
1683186118.714712-UTR-P-wetherbeei_contig1750:5388..55391683186118.714712-UTR-P-wetherbeei_contig1750:5388..5539Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1750 5389..5539 -
1683186118.726224-UTR-P-wetherbeei_contig1750:5997..60761683186118.726224-UTR-P-wetherbeei_contig1750:5997..6076Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1750 5998..6076 -
1683186118.7400172-UTR-P-wetherbeei_contig1750:6422..65151683186118.7400172-UTR-P-wetherbeei_contig1750:6422..6515Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1750 6423..6515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1750.2.1

>prot_P-wetherbeei_contig1750.2.1 ID=prot_P-wetherbeei_contig1750.2.1|Name=mRNA_P-wetherbeei_contig1750.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=242bp
MFDIAFHPNYAATKIFYAFYSFLAGGKHWTRLSQFKYIDGQVAQTGNTET
QLLNIQQTRTVHKAGAIVIHEGQLYLSLGDGGGDDDPDRQAQDETSLLGK
VLRMKVSDTGAVTGTGFSGPNKLIFAKGFRNPHKMTVDSATGELWIGDVG
QSSREELSVLKTTSTSMKNFGWPMWEGFRCNVNFAGGGCDTLSWAAVTPP
SFDYCHPGVGMGAKDKKACPAFTGNCVIGGVVYRGKRYPKLV
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mRNA from alignment at P-wetherbeei_contig1750:1278..6515-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1750.2.1 ID=mRNA_P-wetherbeei_contig1750.2.1|Name=mRNA_P-wetherbeei_contig1750.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5238bp|location=Sequence derived from alignment at P-wetherbeei_contig1750:1278..6515- (Phaeothamnion wetherbeei SAG_119_79)
GTTGCGGGACAGCCAGATCAGAGAAATCTACATTGCTGACGTCCGACTCG ACGGCGTCGACGTCGCTGCGAATTGTCGCACAGCGCACCGGAGGTAATTA TCGGTTCCTTTTCGCCACGATTGTCACCGTCGCCTGACTTTTGGCATGTA GAGTTGTGGGATGTGTTGATTGCTGAATGCGACGGCTTTGTTGGCATTGT CGCGTCTGGTTCGTTTTTAGCTGCTATCCTGTGCCGCCCTCTTCTAAGCT GCTCACTCAGCGCATCATTTTGTCCGCCGCTGACCGGTTTGCGGCGATGA TGACACCTCGACTTCGACCGCAATGGTGTTGGCTGCTGCTGCTGCTGCGG CGGCGGTGGCGGCGACGGGGTCAATGGCGGCGGTTGGAACGGTTACAACT GCGGCGGTTACCACTGCATGAAATCGGGTGCGGCTACAGAATCCTGTGCT CCGAGTGCCACCCGTTTGCCGGACACCTCTATGAGCCGAACAGCGACGGG CGCCAGGTCGATTTCCAGGTCAGTCAGCGCCGCTGGGTGATGGTACGTCG ACCCAACCACCTGGCATTTTAATAACTGGATCTATGTGTTATTCTTGCAG TATCACATCTCCTCGCATTCGCTCAATCGCTCCGGCAGCAAACGGTCGAG GCGCGTGTCTGTTGGTGGTGTGGTCAGCCCTCTGATTGGGCTGTCGGGTC CAGCCCGTCGAAATGGTTGAATCCCGACCGGCCGCGTTCTTGAGACCAGC CGGCAGGGGCGTCTTTGGCATGGTGTGCGCTGTCGCTTTTTGTTGAGCGG CTGTTCCAAGCGCCTTTTCTCGCTGTGCACCTATCGAGCGGTTGACTCGT ACTTGCTCGCCTTTTTCCGCTTTTGCGTCCGCTCCTCAGGATGCTGACCG CCTCGCTTCCGCCGCCCTGCCCTCGCTTTTCCCCTTTCTTCTTCCTCCTT CTTCTTTTTCTCCCCGACCCGATCAGCGCGGAGGCAACCTGCTGACAGAT GGGGACGAGGTGACGGACTGGGAGTCGGCGTGCTGGAACGGAAAGTACCC CAAGCTGTACGAGAAGTACCGGACCCGCCTGATCCGCGCCGACCCTGCCA CCCTCTAGTGAGCCGGACGGAACCCTTGTCATTCATACATCTATTAAGCG CGCTGCTATGCTTTTTGATGGTGGGGTAGGCCATCTGAGAGAAGCAGGCC AAGCACCTTTCTGTAGGAGGAGTAACAACTTATTTTACATATTAAAACCT TCTTTCCTCGGGCCTTGCACGCTTGCGGCTCCTGATGTTACTTGTGCCTC CGGCCTTCAGCTCGGCCGGTTTTTGGCGTTTCGCCTTTCGGTATGGGAAG ATTTTTATTTAGACTTCTGTTGAGGGTGCCGATTCCATGAACGCTTCTCC TCCTTTCTCGGCAGTTGAACCATTGTTTCTTTTTCTTACCCTTGCCGCCG CTCCCTGCCGTTCCTGCCGCCCTGCCCTCCCCGCCGCTGCCGCCGTGTCT CGTCCCGGCTTCGTCACGACGCCGCACGTGAATGGGTGCAGTCACTACCC GTTTAATCCCGAGGTACTTAAGCGCCGCCGGTACGGCGAACTGCGCTTCC TACTTTCTTCCCGGAGAGTGGTTCCTTTTCAATCGTTTCCGTCTTCCTCC TGCAGTCCTGGTCGTCTGTCCAGCAAATCTTACTGTCAATTCAAGTTTCG CAAGTCTTGAGCGCCGGGTTCAGAGCTAGTTGGAATCCGCGTGGCTGAAG GGTGTGATTTTCAAAGTGTTCAATTTATGTGCCGATTTAATCCTTTCTTT GGCTGCCGTTTGTTATCCGTTACCTTCGCCGAACCTGTGGCAGGACTTTG GAGGAGTTGATCCGACCGGCCACCTTCCCCCCATCGCGATCCCGAAGCTA GCGAAGCCAAACCAAGTCATGCAGCTCAGGGTAAGAAGGTTGTAACCATA CAATTGGAAGCGCCGCCTTTCGTACAACCTCTGAAATCCCGCTATCCCCG CCACCAGCTCTCCCACCTTCACGCGGTTCAAATAAAACAATCCCTCGCAA AATTCTCACGTTGGTTATTGGCCGCCGCTAGCACTCTAGACTTTTAAGCC CGTCTGGTTTGATTCTGTGCTGCACCCACGGCTGCGTCGGCTGGCTGATA CTGAATCTGAACGGCTATCTGCCTGGACTGCGAGGGGGATGCGTGGAGTG TGGATGTTGATGGGCGGCCGTTATCTAACTTATGACATACCGGACGACAA ACCACCTCTGCTGCCGCGGCTGCTGCTGCCCGCTGCCCTCGCCGCTGCCG CCGCTGCCGCCGCTGCCGCCGCTGCCGCCGCCGCCGCGCACGCAGATGGT CCCGGGCAAGAACGTGTGGTGGTCGGTGGGCAAGACGGGCGTCGTCTACG AGTTTGTCAACAGCGACACAACCACGACAAAGCGGCTGGTACTCGACATC ACCAGCAAAGTGTATCTGGCCAATTCGGAGGGCATGTTCGACATTGCGTT CCAGTGAGTGGTCGTTTGCTTTTCGTTTGCTTCTCAGCAACGACGAACGG ATTCACTTATTCTGCTCGCGCGCACGGTTCCTCTTCCGATTTTGTCGGTT TGGCCGATTAAGTTTGGAGTGTCAGGTCGTGTCCATCATTGCCCCAAACG CACCAGCACGCGTCGTTCTGCATCTTTCCTTTAATTAGCGTTGCGTCTGT TCAAAGGAGAAACCCCCTTCATCGCCGCTGTCGTTGTCCATCTCAACATT TTTTCCTTCTATTTTCCCTCATTTTACTAAACTTCACATCTGGACCTGTT CCCCGGCCATCGGCCCGCTTTCTGGCCCGCGCTACAGCCCCAACTACGCG GCGACCAAGATCTTCTACGCCTTTTACTCGTTCCTGGCCGGCGGCAAGCA CTGGACACGCCTGTCGCAGTTCAAGTACATTGACGGCCAGGTCGCCCAGA CGGGCAACACGGAGACGCAGCTCCTCAACATCCAACAGACCAGGACGGTC CACAAGGTGTGCGACTACGAATTACGAGAGAGGGGAGGAGGGAACGAGGT GGCGAGGGTGGGTTGAAACTAGACTGGAACTGGATGGGTCGGGAAGAGGT TGATTTCCGATTTAGAGGCGGGGGAGGCAGGCACGAAGAGGCGTTAGTTT CCGCGGCTCCGAAGCCTGGCTCCTGTGGCTTCTTGGCGGTTGTATCGGAC GGTTCTTGCAGGCTGCAAAACAATAACTTCGCCCCGTCCGCACTTATTTA GATTTCTCAAAAGCCCCAACAACCCAACAACAACAAAACCGGGCCGGGCC GCTGGCTGCTATGCCGTCCAACCGTCCAGGCGGGTGCGATCGTCATCCAC GAGGGGCAGCTGTACCTCTCGCTGGGCGATGGCGGCGGCGACGACGACCC CGACCGGCAGGCGCAAGACGAGACGAGCCTCCTCGGCAAGGTCCTCCGGA TGAAAGGTGCAGAAATGGGAAAGGAATCTATTTTTTGCAGAGAGCGGTTC GGTTTTCAGAAATGCTTTCGGTTTTCAGTTAAGTTTTCGGCAGCTGGCTC CCTTTCCTAGTTCGAGAAATATCCAGCGACGACTGGAGGAAACAGAGTGC CTGCAGCCTGCCTGGAGCGAAGTTTGCATTTCTGAAAACGAGGCTTCTTC CGACAGTCTCACTTTATTATCCTTCCTGCTACGTCTCTTATTTCTTCTGC TTTGGTCTGCATCGTCTCTGCCCGGTCACAGTTTCGGACACTGGCGCCGT GACGGGAACGGGCTTCTCTGGCCCGAACAAGCTCATTTTCGCGAAGGGCT TCCGCAATCCGCATAAGATGACGGTCGATTCCGCGACAGGCGAACTCTGG ATCGGCGACGTCGGTGAGCTGTCTCTTCCTTGTTCAATTGCTCCATCTTT CTCTTTGCGTGCAGAGATACCTTGAGACTTCTTTCTCTTTTTTCGTTCTT TTCTGTCTTTCTTTCACACGTGCTACTCTGCACGCTGAATTGCCCGACCC CGCGAAGCTTCGTGACCCCGTCGTGGTATTCCCTAGTGCGGGCGGCTGCT GCATTCGTTGGTTTTCGTTTCTTTTGTCCTTTTCCCGCACAAGTCGTCTA CATCTCTGGCTGAGCATTTTCCATGAGGATTCCGATCAGGAAGTGTATCA TCGCCTTATTTCTATCCCATTCTCCCTCTCTTCCCTCCTCCCTTGCCCTT GTCGGCCATCCTGCCATGACATGGTGTCCTGTTGAGAACCTCAGGCCAAT CCAGTCGGGAGGAGCTCTCAGTCCTCAAGACCACCAGCACGAGCATGAAG AACTTCGGCTGGCCTATGTGGGAAGGTGAGAGCGCCGGCCTTGACGCTGA AAGTCGTCTGTTGACAAACGAAGGACTGTGTTCGGGTAAAAGCTTATAAG CTTGCTGACTGGTGGCAGGCTGGTGGGTGTGGCAAGCGGAGAGCAAGGAC AGCGGTTTCTGCTGTGGTGGCTATGCTACTTCTGTTGCCTAGATTTGCGT ATACTGGCATGCTGTTTGGGGCCGTTTCCCTTTTTTTCCGTAAGATGAGC CTGGATCCTGCTGGAAGTAATAGCTGCCGTTTCTTTTGAGCCATGGGCGA ATAGGAGACGTCATGCTTGAGGCGGCATACACCATCTTTCCAACCACTCC GTGTTCCGTCCCTTCCACGTTTCTCGAACTCTCATACCGCCGTCAACGGC TGGCGGGCTCTGTCAAACCGCAGGCTTCCGCTGCAACGTTAATTTCGCGG GCGGCGGCTGCGACACCCTCAGCTGGGCCGCCGTTACCCCGCCAAGCTTC GACTACTGCCACCCTGGCGTCGGCATGGGCGCCAAGGACAAGAAGGCGTG CCCGGCCTTCACGGGCAATTGCGTCATCGGCGGCGTCGTGTGTGAGCATG AAATCCGTCGCTAAGCGGGAAGCCTGTCACGGGGGCGGACGCCGGGCCGC TTTTATTTTCTGTTTTCTGTTTTCTGTTTTCTGTTTTCTGTTTTCCTTTT CATGTTTTCTGTGTCGGCATGTGGTCGTTGCCGATCTCCGCTGCGCGCTC TTATATGCCCGGCAGCGGGCGGCGTGCCATGAGCGTACCAAGAGTCGAGA CAAGAGCGCGATTGAGCATGTTGCGCTCTGCGTTTCCGTCATGCTGGGTT TTCCTCTTTGGCGATGTTTCCCCGTAATAACCAACATGTTTTCTGCTCCA TGTCTGCAGACCGGGGGAAGCGGTACCCGAAGCTGGTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1750:1278..6515-

>mRNA_P-wetherbeei_contig1750.2.1 ID=mRNA_P-wetherbeei_contig1750.2.1|Name=mRNA_P-wetherbeei_contig1750.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=726bp|location=Sequence derived from alignment at P-wetherbeei_contig1750:1278..6515- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCGACATTGCGTTCCACCCCAACTACGCGGCGACCAAGATCTTCTA
CGCCTTTTACTCGTTCCTGGCCGGCGGCAAGCACTGGACACGCCTGTCGC
AGTTCAAGTACATTGACGGCCAGGTCGCCCAGACGGGCAACACGGAGACG
CAGCTCCTCAACATCCAACAGACCAGGACGGTCCACAAGGCGGGTGCGAT
CGTCATCCACGAGGGGCAGCTGTACCTCTCGCTGGGCGATGGCGGCGGCG
ACGACGACCCCGACCGGCAGGCGCAAGACGAGACGAGCCTCCTCGGCAAG
GTCCTCCGGATGAAAGTTTCGGACACTGGCGCCGTGACGGGAACGGGCTT
CTCTGGCCCGAACAAGCTCATTTTCGCGAAGGGCTTCCGCAATCCGCATA
AGATGACGGTCGATTCCGCGACAGGCGAACTCTGGATCGGCGACGTCGGC
CAATCCAGTCGGGAGGAGCTCTCAGTCCTCAAGACCACCAGCACGAGCAT
GAAGAACTTCGGCTGGCCTATGTGGGAAGGCTTCCGCTGCAACGTTAATT
TCGCGGGCGGCGGCTGCGACACCCTCAGCTGGGCCGCCGTTACCCCGCCA
AGCTTCGACTACTGCCACCCTGGCGTCGGCATGGGCGCCAAGGACAAGAA
GGCGTGCCCGGCCTTCACGGGCAATTGCGTCATCGGCGGCGTCGTGTACC
GGGGGAAGCGGTACCCGAAGCTGGTT
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