mRNA_P-wetherbeei_contig17435.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: A0A7X8XMY9_9BURK (Flagellar biosynthetic protein FliQ n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XMY9_9BURK) HSP 1 Score: 123 bits (309), Expect = 9.100e-35 Identity = 62/93 (66.67%), Postives = 78/93 (83.87%), Query Frame = 1
Query: 1 GEEYFSAEFVMEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEIGHMGP 279
G E FS +V+ I+TQALYLIL LSAPML++AL VGL+IS+LQATTQ+QEQTLSFVPK+ TFLS ++CG WI ML+ FA+R+FS+I +MGP
Sbjct: 5 GAELFSESYVLAITTQALYLILTLSAPMLISALAVGLMISILQATTQVQEQTLSFVPKIVATFLSVVLCGTWIFNMLSNFAIRLFSDIANMGP 97
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: A0A355TRV8_9BACT (Flagellar biosynthetic protein FliQ n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TRV8_9BACT) HSP 1 Score: 110 bits (275), Expect = 1.370e-29 Identity = 51/93 (54.84%), Postives = 74/93 (79.57%), Query Frame = 1
Query: 1 GEEYFSAEFVMEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEIGHMGP 279
G E F FV+ + T+ALYL+L+LSAPMLM+AL VGL++S++QATTQ++EQTLSFVPK+ TF++ ++CGNW+ ML+ F + F++I +GP
Sbjct: 5 GAEVFDDGFVLALCTKALYLVLILSAPMLMSALSVGLMVSIVQATTQVEEQTLSFVPKIIATFMAIVLCGNWMFNMLSSFTISTFADIARLGP 97
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: A0A7Z9PW11_9BACT (Flagellar biosynthetic protein FliQ n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PW11_9BACT) HSP 1 Score: 97.1 bits (240), Expect = 1.900e-24 Identity = 51/83 (61.45%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 31 MEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEIGHMGP 279
MEIST+ L+LI+LLSAPML++AL VGLVIS++QATTQIQEQTL+ VPK+ +TF+S ++CG WI L+ +A +F I MGP
Sbjct: 1 MEISTRGLFLIMLLSAPMLISALCVGLVISIIQATTQIQEQTLASVPKMGITFVSLIVCGPWIMDSLSTYARELFQYIALMGP 83
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: A0A7C6DQJ3_9BACT (Flagellar biosynthetic protein FliQ n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C6DQJ3_9BACT) HSP 1 Score: 85.9 bits (211), Expect = 5.590e-20 Identity = 48/86 (55.81%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 16 SAEFVMEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEIGHM 273
SA VM TQA+YLI++LSAP+L+ ++ VGLVIS+LQA TQIQEQTLSFVPKL TF+ + +WI L FA++VF I ++
Sbjct: 2 SAFDVMNFVTQAMYLIVVLSAPILLTSMIVGLVISLLQAVTQIQEQTLSFVPKLVATFIVIALVASWIANSLYSFAIQVFEYISNI 87
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: A0A1A5YN07_9BACL (Flagellar biosynthetic protein FliQ n=1 Tax=Paenibacillus oryzae TaxID=1844972 RepID=A0A1A5YN07_9BACL) HSP 1 Score: 85.5 bits (210), Expect = 8.150e-20 Identity = 46/83 (55.42%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 16 SAEFVMEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEI 264
SAEFV+ +++ ALY +L SAPML+ AL VGL+ISV QATTQIQEQTL+FVPK+ F++ +I G WI + F R+FS +
Sbjct: 2 SAEFVIGLASSALYTVLKASAPMLVLALVVGLLISVFQATTQIQEQTLAFVPKIVAVFIAVIIFGPWILNTVVDFTYRLFSNL 84
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: A0A7X7S870_9FIRM (Flagellar biosynthetic protein FliQ n=1 Tax=Syntrophomonadaceae bacterium TaxID=2093811 RepID=A0A7X7S870_9FIRM) HSP 1 Score: 84.7 bits (208), Expect = 1.640e-19 Identity = 44/86 (51.16%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 16 SAEFVMEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEIGHM 273
S+E VM ++ + L + L+L+AP L +L GL ISVLQA TQIQEQTL+FVPK+ V FLS ++CG W+ +++ +AV +FS +G M
Sbjct: 2 SSEMVMSLAREGLMVALVLAAPALGLSLLTGLAISVLQAVTQIQEQTLTFVPKIVVVFLSFVVCGPWMLRVVTSYAVNIFSNLGAM 87
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: A0A7C6UP16_9FIRM (Flagellar biosynthetic protein FliQ n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7C6UP16_9FIRM) HSP 1 Score: 83.2 bits (204), Expect = 6.650e-19 Identity = 42/84 (50.00%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 22 EFVMEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEIGHM 273
+F++ + +A+Y ILLLS P+L +L VGL+ISV QATTQIQEQTL+FVPK+ + F+S +I G+W+ ++ F +FS I H+
Sbjct: 4 DFIIYLGKEAVYTILLLSGPLLGVSLLVGLLISVFQATTQIQEQTLTFVPKIVMVFISLVIFGSWMLNLIVTFTTNLFSSIPHL 87
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: UPI001951A22B (flagellar biosynthesis protein FliQ n=1 Tax=Bacillus sp. RD4P76 TaxID=2810349 RepID=UPI001951A22B) HSP 1 Score: 83.2 bits (204), Expect = 6.650e-19 Identity = 38/83 (45.78%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 16 SAEFVMEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEI 264
S+EFV+ + QA+Y +L++S P+L+ ALG+GL++S+ QATTQIQEQTL+FVPK+ F+ + G W+ + F ++FS +
Sbjct: 2 SSEFVISTAEQAIYTVLMISGPLLLLALGIGLLVSIFQATTQIQEQTLAFVPKIVAVFVGIIFFGPWMLSRMISFTYQIFSNL 84
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: UPI000AAFD34C (Flagellar biosynthesis protein FliQ n=1 Tax=Olavius algarvensis Gamma 3 endosymbiont TaxID=260704 RepID=UPI000AAFD34C) HSP 1 Score: 82.8 bits (203), Expect = 9.430e-19 Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 22 EFVMEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEI 264
+ V+++S QALYLI +++APML++ALG+GL+I + QA T I EQTLSF+PKL + LS LI G W+ +L GF R++ I
Sbjct: 4 DMVIDLSQQALYLIAMIAAPMLLSALGIGLLIGMFQAATSINEQTLSFIPKLMILLLSILIAGPWMLNLLLGFTRRLYLGI 84
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Match: UPI001922DAAB (flagellar biosynthesis protein FliQ n=1 Tax=Bacillus sp. YIM B00319 TaxID=2803787 RepID=UPI001922DAAB) HSP 1 Score: 82.8 bits (203), Expect = 9.430e-19 Identity = 41/85 (48.24%), Postives = 64/85 (75.29%), Query Frame = 1
Query: 16 SAEFVMEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTVTFLSCLICGNWICQMLAGFAVRVFSEIGH 270
SA+ V++++ QA++ ILL+SAP+L+ ALGVGLV+S+ QATTQIQEQTL+FVPK+ +S ++ G W+ ++ F ++ +I H
Sbjct: 2 SADTVIKLAEQAVFTILLVSAPLLLMALGVGLVVSIFQATTQIQEQTLAFVPKIIAVLVSLVVFGPWMLSVILDFTQSLYQDIHH 86 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17435.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17435.2.1 >prot_P-wetherbeei_contig17435.2.1 ID=prot_P-wetherbeei_contig17435.2.1|Name=mRNA_P-wetherbeei_contig17435.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp MEISTQALYLILLLSAPMLMAALGVGLVISVLQATTQIQEQTLSFVPKLTback to top mRNA from alignment at P-wetherbeei_contig17435:1088..1381- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17435.2.1 ID=mRNA_P-wetherbeei_contig17435.2.1|Name=mRNA_P-wetherbeei_contig17435.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=294bp|location=Sequence derived from alignment at P-wetherbeei_contig17435:1088..1381- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17435:1088..1381- >mRNA_P-wetherbeei_contig17435.2.1 ID=mRNA_P-wetherbeei_contig17435.2.1|Name=mRNA_P-wetherbeei_contig17435.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig17435:1088..1381- (Phaeothamnion wetherbeei SAG_119_79)back to top |