mRNA_P-wetherbeei_contig17432.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17432.1.1
Unique NamemRNA_P-wetherbeei_contig17432.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: A0A7C4TY94_9HYPH (Sodium:solute symporter n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TY94_9HYPH)

HSP 1 Score: 391 bits (1004), Expect = 1.370e-128
Identity = 217/368 (58.97%), Postives = 265/368 (72.01%), Query Frame = 1
Query:    7 TNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPATR-VRIGVARVALAGVAILTGWIAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREARLQRLQQ 1107
            TNLPLPQLSHGPVLR IGR E AQ V + +AP LA D AG EL+AL HR+A+PY++VGP +FI+  LT++ G+A+APWLLPR   TPGVYETRK+  WA VFCG+I LT ASVAVFLRDAVMD +VGRS +E+P WF +L  LG A  DG+ +R+ LS+L FKRD  LFALP A     V++ +AL GAVAA L+GAS   V +AN++AED L G   EP     R+  AR+A+A VA+  G  A+L+ ADPL L+LW LALS STAFPV+VLSV WKR  AFGA   M AGFT  +LA+LAGE AWLGVP+ L+A              +R+   P++ +L L+RDMRLPGGETIHDRE RL RLQQ
Sbjct:  240 TNLPLPQLSHGPVLRAIGRAEFAQGVPIAIAPSLAFDLAGRELQALVHRMAEPYSSVGPLSFILAALTVMTGVAAAPWLLPRCGVTPGVYETRKAVGWATVFCGIITLTVASVAVFLRDAVMDDLVGRSAAEMPTWFLRLQELGWAGVDGNAQRVVLSSLSFKRDTVLFALPHAAGLPTVIVLLALAGAVAATLIGASAGAVTLANVLAEDILNGARREPPPAGPRVMAARLAVAMVAVAAGTGALLLRADPLSLLLWALALSGSTAFPVLVLSVWWKRTTAFGALCGMAAGFTVAVLAMLAGEAAWLGVPAPLAAXXXXXXXXXXXXXXSRMGKAPERLVLELVRDMRLPGGETIHDREIRLLRLQQ 607          
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: A0A2W4RRT8_9PROT (Sodium:solute symporter n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RRT8_9PROT)

HSP 1 Score: 340 bits (872), Expect = 9.300e-109
Identity = 180/368 (48.91%), Postives = 252/368 (68.48%), Query Frame = 1
Query:    7 TNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPA-TRVRIGVARVALAGVAILTGWIAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREARLQRLQQ 1107
            T LP  QLSHGPVLR + R EA Q + +P+A  LA + AGLEL ++  R+A+P+ ++GP +F++  LTL+ G+A+APWLLPR    P VY+TRKS  WA    G I++TA+SVAVF+RD VMD +VG S  +LP+WF+ L + GLA   G   RL +S+  F RDA LFALP+A  +  V++Y+ L GA AAA+   S + +A+ + ++ED + GL WEPA  ++R+  AR+A+A   ++  W+A++ P DPL LMLW LALSAS  FPV+VLS+ WKRLN+ GA   M  GF   ++AI+ GE   LG+ S L+ A G+P  FLAA  A+++  +P +  L LL D R+PGGET++DRE RL RL++
Sbjct:  240 TYLPFAQLSHGPVLRALSRLEAQQGMPIPVASPLAFEIAGLELTSITQRMAKPFGSIGPLSFVLASLTLMAGVAAAPWLLPRTGTAPSVYDTRKSLGWATFLVGTILVTASSVAVFMRDVVMDTLVGHSIDQLPEWFRTLEAAGLAEVHGQVPRLPISSFTFYRDAVLFALPIAYGYPAVLVYLPLAGAFAAAVAAISVSTLALGSTLSEDVINGLRWEPAPNQLRLTTARIAIAAATLVGTWLALVAPTDPLSLMLWALALSASGLFPVLVLSIWWKRLNSLGALTGMGTGFGVAVMAIITGEATSLGLHSALAGALGMPVGFLAAIGASKLGPQPSRQTLELLDDFRIPGGETVYDREMRLLRLKE 607          
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: A0A2W4KVX2_9PROT (Sodium:solute symporter n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KVX2_9PROT)

HSP 1 Score: 328 bits (842), Expect = 2.720e-104
Identity = 183/372 (49.19%), Postives = 252/372 (67.74%), Query Frame = 1
Query:    7 TNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPA-TRVRIGVARVALAGVAILTGWIAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREARLQRLQQQRGP 1119
            TNLP  QLSHGPVLR++ R E  Q + +P+   LA + AG E++A+A R+ +P+ ++GP +F+   LTL+ G+ASAPWLLPR+  T  VY+TRKS  WA    G IM+TA+SVAVF+RD VMD +VG S S+LPDWF+ L ++G A+  G   RL +S+  F RDA LFALP+A  F  V LY+AL GA AAA+   S + +++  +++ED + GL  EPA  + R+ +AR  +A   I+   IA++VPADPL L+LW LALSAS  FP++VLS+ WKRL+AFG     +AGF  T L I+AGE + LG+   L+A  G+PA F AA   + +       I+ L+ D+R+PGGETI+DRE RL RL+Q+  P
Sbjct:  239 TNLPFAQLSHGPVLRSLVRLENQQGIPIPILSPLAFEIAGAEVQAIAQRMTKPFGSIGPLSFVFASLTLMAGVASAPWLLPRSGTTLTVYDTRKSLGWATFLVGTIMVTASSVAVFMRDVVMDTLVGHSASQLPDWFRSLEAMGFAAVHGQVPRLPVSSFSFHRDAVLFALPIAHGFPSVFLYLALAGAFAAAVAAVSLSSLSLGTLLSEDLINGLKAEPARNKFRLMLARGCIALAVIIGVGIALIVPADPLWLVLWALALSASAFFPILVLSIWWKRLSAFGTACGALAGFAVTALVIVAGEAS-LGLSGALAAVLGMPAGFAAAVAGSYLRPSSSPKIVELVEDLRVPGGETIYDRETRLLRLRQRSRP 609          
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: UPI000931E802 (sodium:solute symporter n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI000931E802)

HSP 1 Score: 321 bits (822), Expect = 2.720e-101
Identity = 179/366 (48.91%), Postives = 240/366 (65.57%), Query Frame = 1
Query:    7 TNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPATRV-RIGVARVALAGVAILTGWIAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREARLQRL 1101
            TN PLPQL++GP+LR +   EAAQ + +  AP L     G  +  +A R   P+  +GP AF++ ILT++ G+A++PWL+PR   TPGVYETRKS  WA V+ GLIMLT A+VAV++RD VMD V    PS LP+W ++L  LG  + D S   L   +  F RD+ L +LPVA     V LY A  G VAAAL+G S    A+ N+IAED + G  WEP  R  R+ VAR+A+AG+A+  G +A+L P DPL L+LW LAL+ ST FPV+VLS+ WKR+N FGA   M +GF+  +L ILAGE   LG+   L++  GLPA  L A +A+    +P + +L L+R++R+PGGE I+DRE RL RL
Sbjct:  240 TNFPLPQLTNGPLLRALVHNEAAQGLPIIDAPALQFALPGEGMAHIAKRFTAPFGAIGPMAFVVTILTVLTGVAASPWLIPRVTMTPGVYETRKSLGWATVYFGLIMLTCAAVAVYMRDFVMDIVKAGVPSSLPEWMQRLVDLGFVAID-SAAPLNYMSFAFDRDSVLLSLPVAAGLPAVFLYFAAAGIVAAALVGVSATASAIGNVIAEDVVNGFSWEPLPRDGRLHVARIAMAGIALAGGAVALLAPTDPLRLLLWSLALAGSTFFPVLVLSIWWKRMNDFGAIAGMASGFSVAVLTILAGEANILGIDGALASILGLPAGALGAVLASIATPQPSRSVLELVREIRIPGGEVIYDREMRLLRL 604          
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: A0A2S5P7H4_HYPSQ (Sodium:solute symporter n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5P7H4_HYPSQ)

HSP 1 Score: 318 bits (814), Expect = 4.150e-100
Identity = 174/371 (46.90%), Postives = 240/371 (64.69%), Query Frame = 1
Query:    1 FETNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPATRV-RIGVARVALAGVAILTGW-IAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREARLQRLQQ 1107
            F TN P+PQLSHGP+LR++ + EA Q + + +  +L  +  G  L+ +A R   P+  VGP  F++  L+++ G+A++PWLLPR    P VYE RKS  WA    G IMLT +SVAVF+RDAVMD V     +++P+W  +L ++G A  +  + RLA + +  +RDA LFALP       V+  MAL GAVAAAL GA  A VA+ N++AED   GL WEP   V R+ V R++L G+A+  GW IA + P DPL LM+W  A++ S AFPV+VLS+ WKR NAFGA   +  GF   +LAI+AGE  W+ + S L+A FG+P + LA  +       P++H+L L+RD+R+PGGE I DRE RL RL+Q
Sbjct:  237 FVTNTPVPQLSHGPLLRSLLKIEAQQGLPIIVPAMLGFELPGEGLQQMAKRFTSPFGLVGPGGFVVATLSVLAGVAASPWLLPRVATAPSVYEARKSLGWATFMFGFIMLTVSSVAVFMRDAVMDIVTVEGSTQVPEWLARLVAIGHAEIESRSTRLAATGISIERDAVLFALPSVLGMPSVMTQMALAGAVAAALAGAGAATVAIGNVLAEDVFNGLSWEPVPPVARLWVGRLSL-GIALGLGWLIAAMAPTDPLRLMIWAFAITGSAAFPVLVLSIWWKRCNAFGAIAGLATGFAVAVLAIVAGEAKWIEIDSALAAMFGVPVSILATIVVGLATPSPNRHVLELVRDIRVPGGEIIQDRETRLVRLKQ 606          
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: A0A6N6T688_9HYPH (Sodium:solute symporter n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T688_9HYPH)

HSP 1 Score: 317 bits (811), Expect = 1.190e-99
Identity = 174/366 (47.54%), Postives = 244/366 (66.67%), Query Frame = 1
Query:    7 TNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPATR-VRIGVARVALAGVAILTGWIAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREARLQRL 1101
            +NLPLPQ++HG ++R + R EA + V + +AP LA D  G+ +  L  R  Q + +VG   F+++   +  GIA++P LLPR+  TPGVYE RKS  WA++  G+++LT  +VAV+LR  +++QVVG +  +LP WF+ L   G+A  D  T+ +AL+N+ F+RDA +FALP+A  F  V++Y+AL GA+AAAL       V+ A ++AED + GL  E A    RIG ARVAL GVA +T W+A+  PADPL L LWGLA SA+ +FPV++LS+ WKRLNA+GA   MI GF+ T   +L  E+  L +PS LS A  +P AF+AA   + +   P K  L  LRD+R+PGGET++DRE RL RL
Sbjct:  240 SNLPLPQMTHGNIVRVLTRLEAVRGVPIIVAPPLAFDLPGVTVEPLTKRFIQAFGSVGGLGFVLMSFVVAMGIAASPALLPRSGTTPGVYEARKSGGWAVLVAGIVLLTLPAVAVYLRTMIVEQVVGHTGDQLPIWFQLLQQAGVAKVDSKTQLVALANIGFERDAAIFALPIAAGFPQVLVYLALAGALAAALAXXXXXXVSAAAILAEDVVHGLPNETAPENARIGTARVALLGVAFVTAWLAIAAPADPLQLFLWGLAFSAAASFPVLLLSIWWKRLNAWGAMAGMITGFSITAFIVLLSEIGALALPSPLSGAIAMPLAFVAAIGVSLVTPAPGKSALDALRDLRVPGGETMYDREMRLLRL 605          
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: A0A6I3KMI9_9HYPH (Sodium:solute symporter n=2 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I3KMI9_9HYPH)

HSP 1 Score: 311 bits (798), Expect = 1.010e-97
Identity = 173/366 (47.27%), Postives = 235/366 (64.21%), Query Frame = 1
Query:    7 TNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPATRV-RIGVARVALAGVAILTGWIAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREARLQRL 1101
            TN PLPQL++GP+LR +   EAA  + +  A  LA    G     +A R   P+  +GP AF++  LT++ G+AS+PWL+PR   TPGVYETRKS  WA V+  LIMLTAA+VAV++RD +MD V G +P+ LP+W ++L  LG A+ D +   L  +     RD+ L +LPVA +   V +Y A TG VAAAL+GA     A+ N+IAED + GL WEP  R  R+ + R+A+ G A++ G +A++ P DPL L+LW LALS ST FPV+VLS+ WKR+NAFGA   M  GF   +L ILAG    LG+   L+   GLPA    A +A+     P + +L L+R++R+PGGE I+DRE RL RL
Sbjct:  240 TNFPLPQLTNGPLLRALMHSEAAHGLPIADASALAFGLPGEGFVHIAKRFTAPFGAIGPTAFVVATLTVMAGVASSPWLIPRVTMTPGVYETRKSLGWATVYFSLIMLTAAAVAVYMRDYLMDVVNGGAPAALPEWMRRLVDLGFATVDTAVP-LTYTGFAIARDSVLLSLPVAAEMPSVFVYFAATGIVAAALVGAGAVASALGNVIAEDVVNGLSWEPLPRTGRVHMGRLAIVGAAVVGGLVALVAPTDPLRLLLWSLALSGSTFFPVIVLSIWWKRMNAFGAIAGMSCGFGVAVLTILAGAANILGLDGALAGILGLPAGVAGAVLASITTPAPGRSVLELVREIRVPGGEVIYDREMRLLRL 604          
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: UPI0003812D23 (hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI0003812D23)

HSP 1 Score: 308 bits (790), Expect = 1.580e-96
Identity = 179/365 (49.04%), Postives = 230/365 (63.01%), Query Frame = 1
Query:    7 TNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPA-TRVRIGVARVALAGVAILTGWIAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREARLQR 1098
            TNLPLPQLS GPVLR +GR EAAQ + + L P LA D  G  L  +A R +  + +VGP AF+++ILTL+ GIASAPWLLPR   TPGVYE RKS  WA    G+ MLT ASVA+F+RD + D V        P+WF  L   G+ S  G   R  LS+    RD  L +LP+A +    ++Y+A  G VAAAL  A    +A+ N++AED + GL W PA T  R+ V+R+AL   A + G IA+  P DPL L+LW +AL+ ++ FPV+VLS+ WKRLNAFGA   M  GF  T+LAI+AGE    G  S L+AA GLPA  +A          P K +L L+RD+R+PGGE ++DRE R QR
Sbjct:  240 TNLPLPQLSSGPVLRMMGRAEAAQGLPIILPPALAFDMPGEGLAPIAKRYSDAFGSVGPLAFVIIILTLLSGIASAPWLLPRVAGTPGVYEARKSLGWATFLFGIAMLTIASVAIFMRDYLTDLVTAVGQVRFPEWFDALRERGILSVAGDG-RPTLSSFNVSRDDVLLSLPIAAEMPAALVYLAAGGVVAAALATAGAVALALGNILAEDIVYGLSWSPARTGPRLIVSRLALGTAAAVAGLIALAAPTDPLKLVLWAVALTGASTFPVLVLSIWWKRLNAFGAVAGMATGFGVTVLAIIAGEAGLTGTDSALAAAIGLPAGAVATIAVALATPGPQKTLLELVRDIRVPGGEILYDREMRHQR 603          
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: UPI0009312B44 (sodium:solute symporter n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI0009312B44)

HSP 1 Score: 308 bits (789), Expect = 2.120e-96
Identity = 169/362 (46.69%), Postives = 230/362 (63.54%), Query Frame = 1
Query:    7 TNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPATRV-RIGVARVALAGVAILTGWIAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREAR 1089
            TNLPLPQLS GPVLR +GR EAAQ + + L P+LA D  G  L  +A R +  + +VGP AFI+V L+L+ G+ASAPWLLPR   TPGVYE RKS  WA +  G+ MLT  SVA+F+RD + D V        P WF+ L + G+ + +    R  LS+    RD  L +LPV  +    V+Y+A  G VAAAL  A    +A+ N+++ED + GL W P     R+ VAR+AL   A L G++A++ P DPL+L+LW +AL+ ++ FPV+VLS+ WKRLN FGA   ++ GF  T+LAI+AGE    G    L+AA GLPA  +AA         P +++L L+RD+R+PGGE ++DRE R
Sbjct:  240 TNLPLPQLSAGPVLRTVGRAEAAQGLPIILPPMLAFDMPGEGLSPIAKRYSDAFGSVGPLAFIIVTLSLLAGVASAPWLLPRVAGTPGVYEARKSLGWATLLFGIAMLTIGSVAIFMRDYLTDIVTVAGTVRFPQWFETLQTQGILAVNADGGRPTLSSFSVSRDDVLLSLPVVAEMPAAVVYLAAGGVVAAALATAGAVAIALGNILSEDIVNGLTWLPTKSTSRLIVARLALGAAAALAGFLAIVAPTDPLELLLWAIALTGASTFPVLVLSIWWKRLNEFGATAGILTGFCVTVLAIIAGEAGLTGTDGALAAAIGLPAGAVAAIAVALATPAPPRNLLELVRDIRVPGGEILYDREMR 601          
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Match: V5SHV5_9HYPH (Sodium:solute symporter n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SHV5_9HYPH)

HSP 1 Score: 303 bits (777), Expect = 1.410e-94
Identity = 174/365 (47.67%), Postives = 228/365 (62.47%), Query Frame = 1
Query:    7 TNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAHRIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAWAIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASADGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGASTAIVAVANMIAEDGLGGLVWEPA-TRVRIGVARVALAGVAILTGWIAMLVPADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLAILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMRLPGGETIHDREARLQR 1098
            TNLPLPQLS GP+LR IGR EAAQ + + L P LA D  G  L  +A R +  +  +GP AF++  L+++ G+ASAPWLLPR   TPGVYE RKS  WA +  G+ MLT ASVA+F+RD + D V        P WF+ L + G+ +  G   R  LS+    RD  L ALP+A +   +VLY+A  G +AAAL  A+   +A+ N++AED + GL W P     R+ VAR+AL   A L G IA+  P DPL LMLW LAL+ + AFPV+VLS+ WKRLNAFGA   +  GF  T+LAI+AGE    G  S L+AA GLPA  +A          P + +L L+ D+R+PGGE ++DRE R Q+
Sbjct:  241 TNLPLPQLSAGPILRTIGRAEAAQGLPIILPPALAFDMPGEGLGLIAKRYSDAFGNIGPLAFVITTLSVLAGVASAPWLLPRVAGTPGVYEARKSLGWATLLFGISMLTIASVAIFMRDYLTDIVTVAGQVRFPPWFEDLVARGILTVGGEG-RPTLSSFSVSRDDVLLALPIAAEMPAIVLYLAAGGVLAAALATAAAIALALGNILAEDVVYGLSWSPVGPGARLIVARLALGTAAALGGLIALAAPTDPLKLMLWALALTGAAAFPVLVLSIWWKRLNAFGAVAGISTGFGVTVLAIIAGEAGITGTDSALAAAIGLPAGAVAXXXXXXXXXXPSRSVLELVLDIRVPGGEILYDREMRYQK 604          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17432.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TY94_9HYPH1.370e-12858.97Sodium:solute symporter n=1 Tax=Hyphomicrobiales b... [more]
A0A2W4RRT8_9PROT9.300e-10948.91Sodium:solute symporter n=1 Tax=Proteobacteria bac... [more]
A0A2W4KVX2_9PROT2.720e-10449.19Sodium:solute symporter n=1 Tax=Proteobacteria bac... [more]
UPI000931E8022.720e-10148.91sodium:solute symporter n=1 Tax=Hyphomicrobium sp.... [more]
A0A2S5P7H4_HYPSQ4.150e-10046.90Sodium:solute symporter n=2 Tax=Hyphomicrobium sp.... [more]
A0A6N6T688_9HYPH1.190e-9947.54Sodium:solute symporter n=1 Tax=Hyphomicrobiaceae ... [more]
A0A6I3KMI9_9HYPH1.010e-9747.27Sodium:solute symporter n=2 Tax=Hyphomicrobium Tax... [more]
UPI0003812D231.580e-9649.04hypothetical protein n=1 Tax=Hyphomicrobium zavarz... [more]
UPI0009312B442.120e-9646.69sodium:solute symporter n=1 Tax=Hyphomicrobium sp.... [more]
V5SHV5_9HYPH1.410e-9447.67Sodium:solute symporter n=1 Tax=Hyphomicrobium nit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17432contigP-wetherbeei_contig17432:2..1123 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1267005.KB911256_gene1877
Preferred nameyjcG
PFAMsSSF
Model size1122
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K14393
KEGG TC2.A.21.7
Hectar predicted targeting categorysignal anchor
Exons1
Evalue2.59e-97
EggNOG OGsCOG4147@1|root,COG4147@2|Bacteria,1MVJ8@1224|Proteobacteria,2TTA4@28211|Alphaproteobacteria,3N7PS@45401|Hyphomicrobiaceae
DescriptionBelongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Cds size1122
COG categoryS
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186117.429794-CDS-P-wetherbeei_contig17432:1..11231683186117.429794-CDS-P-wetherbeei_contig17432:1..1123Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17432 2..1123 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17432.1.1prot_P-wetherbeei_contig17432.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17432 2..1123 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17432.1.1

>prot_P-wetherbeei_contig17432.1.1 ID=prot_P-wetherbeei_contig17432.1.1|Name=mRNA_P-wetherbeei_contig17432.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=374bp
FETNLPLPQLSHGPVLRNIGRQEAAQAVAMPLAPILAVDFAGLELRALAH
RIAQPYATVGPAAFIMVILTLICGIASAPWLLPRACATPGVYETRKSAAW
AIVFCGLIMLTAASVAVFLRDAVMDQVVGRSPSELPDWFKQLASLGLASA
DGSTERLALSNLKFKRDATLFALPVAGQFSPVVLYMALTGAVAAALLGAS
TAIVAVANMIAEDGLGGLVWEPATRVRIGVARVALAGVAILTGWIAMLVP
ADPLDLMLWGLALSASTAFPVVVLSVLWKRLNAFGAGVSMIAGFTTTLLA
ILAGEVAWLGVPSTLSAAFGLPAAFLAAGIATRIAGRPDKHILTLLRDMR
LPGGETIHDREARLQRLQQQRGP*
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mRNA from alignment at P-wetherbeei_contig17432:2..1123+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17432.1.1 ID=mRNA_P-wetherbeei_contig17432.1.1|Name=mRNA_P-wetherbeei_contig17432.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1122bp|location=Sequence derived from alignment at P-wetherbeei_contig17432:2..1123+ (Phaeothamnion wetherbeei SAG_119_79)
TTCGAGACGAACCTGCCGCTGCCGCAGTTGAGCCATGGCCCGGTCCTGCG CAACATCGGCCGCCAGGAGGCAGCCCAGGCGGTTGCCATGCCGTTGGCGC CGATCCTGGCTGTAGACTTTGCGGGTCTTGAACTGCGCGCGCTGGCGCAT CGGATTGCCCAGCCCTACGCCACGGTCGGTCCCGCCGCCTTCATCATGGT GATCCTGACGCTGATCTGCGGGATCGCCTCCGCACCCTGGCTGCTGCCGC GCGCCTGCGCGACGCCGGGCGTCTACGAAACCCGCAAGTCGGCCGCATGG GCCATCGTATTCTGCGGCCTCATCATGCTGACGGCAGCATCCGTGGCGGT GTTTCTGCGGGATGCGGTCATGGACCAGGTCGTCGGCCGCAGCCCGAGCG AGCTTCCCGACTGGTTCAAGCAGTTGGCCAGTCTCGGCCTCGCCTCCGCC GATGGCAGCACGGAACGCCTTGCCCTCTCGAACCTGAAATTCAAGCGCGA CGCGACCTTGTTCGCGCTCCCCGTCGCCGGGCAATTCTCTCCCGTCGTCC TCTACATGGCGCTGACCGGCGCGGTCGCAGCAGCACTGCTGGGCGCCAGC ACGGCGATCGTAGCGGTCGCCAATATGATCGCCGAGGATGGCCTGGGCGG CCTTGTATGGGAGCCGGCGACGAGGGTCCGTATCGGCGTGGCGCGCGTGG CCCTGGCCGGCGTTGCAATCCTCACGGGCTGGATCGCGATGCTGGTGCCG GCCGACCCGCTCGATCTGATGTTGTGGGGCCTTGCGCTGTCGGCTTCTAC CGCTTTCCCTGTCGTCGTCCTGTCCGTGCTTTGGAAGCGGCTCAATGCGT TCGGTGCCGGGGTCAGCATGATCGCGGGCTTCACGACGACCCTGCTGGCT ATACTTGCGGGCGAAGTCGCATGGCTGGGCGTGCCGAGCACATTGTCCGC CGCGTTCGGCCTGCCCGCCGCATTCCTGGCCGCCGGCATCGCGACCCGCA TCGCGGGACGTCCCGATAAACACATCCTGACGCTATTGCGCGATATGCGG CTCCCCGGCGGCGAAACGATCCACGACCGCGAGGCCCGCCTCCAGCGCCT GCAACAACAACGCGGCCCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17432:2..1123+

>mRNA_P-wetherbeei_contig17432.1.1 ID=mRNA_P-wetherbeei_contig17432.1.1|Name=mRNA_P-wetherbeei_contig17432.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1122bp|location=Sequence derived from alignment at P-wetherbeei_contig17432:2..1123+ (Phaeothamnion wetherbeei SAG_119_79)
TTCGAGACGAACCTGCCGCTGCCGCAGTTGAGCCATGGCCCGGTCCTGCG
CAACATCGGCCGCCAGGAGGCAGCCCAGGCGGTTGCCATGCCGTTGGCGC
CGATCCTGGCTGTAGACTTTGCGGGTCTTGAACTGCGCGCGCTGGCGCAT
CGGATTGCCCAGCCCTACGCCACGGTCGGTCCCGCCGCCTTCATCATGGT
GATCCTGACGCTGATCTGCGGGATCGCCTCCGCACCCTGGCTGCTGCCGC
GCGCCTGCGCGACGCCGGGCGTCTACGAAACCCGCAAGTCGGCCGCATGG
GCCATCGTATTCTGCGGCCTCATCATGCTGACGGCAGCATCCGTGGCGGT
GTTTCTGCGGGATGCGGTCATGGACCAGGTCGTCGGCCGCAGCCCGAGCG
AGCTTCCCGACTGGTTCAAGCAGTTGGCCAGTCTCGGCCTCGCCTCCGCC
GATGGCAGCACGGAACGCCTTGCCCTCTCGAACCTGAAATTCAAGCGCGA
CGCGACCTTGTTCGCGCTCCCCGTCGCCGGGCAATTCTCTCCCGTCGTCC
TCTACATGGCGCTGACCGGCGCGGTCGCAGCAGCACTGCTGGGCGCCAGC
ACGGCGATCGTAGCGGTCGCCAATATGATCGCCGAGGATGGCCTGGGCGG
CCTTGTATGGGAGCCGGCGACGAGGGTCCGTATCGGCGTGGCGCGCGTGG
CCCTGGCCGGCGTTGCAATCCTCACGGGCTGGATCGCGATGCTGGTGCCG
GCCGACCCGCTCGATCTGATGTTGTGGGGCCTTGCGCTGTCGGCTTCTAC
CGCTTTCCCTGTCGTCGTCCTGTCCGTGCTTTGGAAGCGGCTCAATGCGT
TCGGTGCCGGGGTCAGCATGATCGCGGGCTTCACGACGACCCTGCTGGCT
ATACTTGCGGGCGAAGTCGCATGGCTGGGCGTGCCGAGCACATTGTCCGC
CGCGTTCGGCCTGCCCGCCGCATTCCTGGCCGCCGGCATCGCGACCCGCA
TCGCGGGACGTCCCGATAAACACATCCTGACGCTATTGCGCGATATGCGG
CTCCCCGGCGGCGAAACGATCCACGACCGCGAGGCCCGCCTCCAGCGCCT
GCAACAACAACGCGGCCCCTGA
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