mRNA_P-wetherbeei_contig17408.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17408.2.1
Unique NamemRNA_P-wetherbeei_contig17408.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: D7G583_ECTSI (Acetylornithine transaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G583_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 4.580e-34
Identity = 61/85 (71.76%), Postives = 71/85 (83.53%), Query Frame = 1
Query:   22 STSAAPTTAEQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ 276
            STS+AP T +QF  YVQ TYGRYPLT+VRG+GCKL+D+DGKEYLDFVAGI+TCALGH+   L  AV +QM   HHVSNLYYIP+Q
Sbjct:   55 STSSAPLTQDQFNAYVQNTYGRYPLTIVRGEGCKLFDSDGKEYLDFVAGISTCALGHADSDLAAAVGDQMKKFHHVSNLYYIPEQ 139          
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: A0A7S2JSE9_9STRA (Acetylornithine transaminase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSE9_9STRA)

HSP 1 Score: 130 bits (327), Expect = 6.690e-34
Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 1
Query:   43 TAEQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ 276
            T E F + VQKTYGRYPLT+VRG+GCKLYD DGKEYLDFVAGIATC LGHSH GL  AVT Q++ +HHVSNLYYIPQQ
Sbjct:   72 TKEIFDSSVQKTYGRYPLTIVRGEGCKLYDEDGKEYLDFVAGIATCVLGHSHKGLADAVTNQINSLHHVSNLYYIPQQ 149          
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: A0A835ZAE5_9STRA (Acetylornithine transaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE5_9STRA)

HSP 1 Score: 127 bits (320), Expect = 6.610e-33
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = 1
Query:   28 SAAPTTAEQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ 276
            SAAP T ++++ YVQ TYGRYPLT+VRGKGC L D DGKEYLD VAGI+TCALGH+   LT AV+ QMS MHH+SNLYYIP+Q
Sbjct:   55 SAAPLTMDEYSKYVQTTYGRYPLTIVRGKGCHLVDKDGKEYLDMVAGISTCALGHADPELTSAVSAQMSRMHHISNLYYIPEQ 137          
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: A0A7S2SBS5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBS5_9STRA)

HSP 1 Score: 117 bits (294), Expect = 9.910e-32
Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1
Query:   43 TAEQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ 276
            TA  F   VQKTYGRYP+T V+G+GC L D DGK YLDFV+GIATCALGHS+  LTKAV++QM+ +HHVSNLYY PQQ
Sbjct:   65 TANLFDTRVQKTYGRYPITFVKGEGCVLTDEDGKVYLDFVSGIATCALGHSNPALTKAVSDQMASLHHVSNLYYTPQQ 142          
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: A0A7S1B5K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B5K6_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.550e-30
Identity = 52/75 (69.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query:   52 QFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ 276
            +F +YV KTYGRYPLT+  GKGC LY ADG EYLDFVAGIATC LGH H  L  AV+ QM  +HHVSNLY IP+Q
Sbjct:   81 KFEDYVLKTYGRYPLTLTSGKGCTLYAADGSEYLDFVAGIATCVLGHGHPALVAAVSSQMERLHHVSNLYLIPEQ 155          
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: A0A7S2S6J9_9STRA (Acetylornithine transaminase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6J9_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.030e-30
Identity = 53/76 (69.74%), Postives = 65/76 (85.53%), Query Frame = 1
Query:   49 EQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ 276
            EQF   V KTYGRYP+TM++GKG +L+D+ GKEYLDFVAGI+TC LGH+H GL +A+T+QMS +HHVSNLYYIP Q
Sbjct:   60 EQFDTNVMKTYGRYPITMMKGKGLRLWDSTGKEYLDFVAGISTCCLGHAHPGLVEAITKQMSTVHHVSNLYYIPNQ 135          
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: UPI001F2F2A96 (aspartate aminotransferase family protein n=2 Tax=Synechococcus TaxID=1129 RepID=UPI001F2F2A96)

HSP 1 Score: 118 bits (296), Expect = 9.240e-30
Identity = 53/88 (60.23%), Postives = 70/88 (79.55%), Query Frame = 1
Query:   13 LEKSTSAAPTTAEQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ 276
            L ++T+ +PTTA  FA++V  TYGRYPLT+VRG+GC+++D  G+EYLDFVAGIATC LGH+H    +A+TEQ   +HH+SNLYY P Q
Sbjct:    8 LVEATTGSPTTAALFADHVMSTYGRYPLTLVRGQGCRVWDEQGREYLDFVAGIATCTLGHAHPVWIQALTEQAQRLHHISNLYYNPPQ 95          
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: A0A8J6T7Q8_9CYAN (Acetylornithine aminotransferase n=3 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J6T7Q8_9CYAN)

HSP 1 Score: 118 bits (295), Expect = 1.260e-29
Identity = 54/82 (65.85%), Postives = 68/82 (82.93%), Query Frame = 1
Query:   31 AAPTTAEQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ 276
            A+P+ AE F  YV  TYGR+PLT+ RG GC+++DADG+EYLDFVAGIATC LGH+H  L +AVT+Q+  +HHVSNLYYIP+Q
Sbjct:   15 ASPSPAE-FDEYVMSTYGRFPLTLERGAGCRVWDADGREYLDFVAGIATCTLGHAHPVLVEAVTQQIQKLHHVSNLYYIPEQ 95          
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: A0A8J6WV32_9CYAN (Acetylornithine aminotransferase n=6 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6WV32_9CYAN)

HSP 1 Score: 117 bits (294), Expect = 1.840e-29
Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 1
Query:   28 SAAPTTAEQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ 276
            +AAP  A +F  YV  TYGR+PL + RG GC+++D +G+EYLDFVAGIATC LGH+H  L  AVT+Q+  +HHVSNLYYIPQQ
Sbjct:   15 AAAPFNAAEFDEYVMTTYGRFPLALERGLGCRVWDTEGREYLDFVAGIATCTLGHAHPALVAAVTQQIQTLHHVSNLYYIPQQ 97          
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Match: Q2JLM2_SYNJB (Acetylornithine aminotransferase n=2 Tax=unclassified Synechococcus TaxID=2626047 RepID=Q2JLM2_SYNJB)

HSP 1 Score: 117 bits (292), Expect = 3.530e-29
Identity = 53/84 (63.10%), Postives = 66/84 (78.57%), Query Frame = 1
Query:   13 LEKSTSAAPTTAEQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEYLDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYY 264
            L  + S +PTTAE FA +V  TYGRYPLT+VRG+GC+++D  G+EYLDFVAGIATC LGH+H    +A+TEQ   +HHVSNLYY
Sbjct:    8 LASAPSGSPTTAELFAEHVMATYGRYPLTLVRGQGCRVWDEQGREYLDFVAGIATCTLGHAHPLWIQALTEQAQQLHHVSNLYY 91          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17408.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G583_ECTSI4.580e-3471.76Acetylornithine transaminase n=2 Tax=Ectocarpus Ta... [more]
A0A7S2JSE9_9STRA6.690e-3478.21Acetylornithine transaminase n=1 Tax=Leptocylindru... [more]
A0A835ZAE5_9STRA6.610e-3371.08Acetylornithine transaminase n=1 Tax=Tribonema min... [more]
A0A7S2SBS5_9STRA9.910e-3270.51Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1B5K6_9STRA2.550e-3069.33Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2S6J9_9STRA4.030e-3069.74Acetylornithine transaminase n=1 Tax=Rhizochromuli... [more]
UPI001F2F2A969.240e-3060.23aspartate aminotransferase family protein n=2 Tax=... [more]
A0A8J6T7Q8_9CYAN1.260e-2965.85Acetylornithine aminotransferase n=3 Tax=Pseudanab... [more]
A0A8J6WV32_9CYAN1.840e-2962.65Acetylornithine aminotransferase n=6 Tax=unclassif... [more]
Q2JLM2_SYNJB3.530e-2963.10Acetylornithine aminotransferase n=2 Tax=unclassif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17408contigP-wetherbeei_contig17408:812..1087 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G583
PFAMsAminotran_3
Model size276
Max annot lvl2759|Eukaryota
KEGG rclassRC00006,RC00062
KEGG koko:K00818
KEGG ReactionR02283
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.52e-35
EggNOG OGsCOG4992@1|root,KOG1401@2759|Eukaryota
Ec32 ortholog descriptionacetylornithine aminotransferase
Ec32 orthologEc-14_006580.1
EC2.6.1.11
DescriptionN2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
Cds size276
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186116.7330167-CDS-P-wetherbeei_contig17408:811..10871683186116.7330167-CDS-P-wetherbeei_contig17408:811..1087Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17408 812..1087 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17408.2.1prot_P-wetherbeei_contig17408.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17408 812..1087 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17408.2.1

>prot_P-wetherbeei_contig17408.2.1 ID=prot_P-wetherbeei_contig17408.2.1|Name=mRNA_P-wetherbeei_contig17408.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=92bp
MVASLEKSTSAAPTTAEQFANYVQKTYGRYPLTMVRGKGCKLYDADGKEY
LDFVAGIATCALGHSHDGLTKAVTEQMSMMHHVSNLYYIPQQ
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mRNA from alignment at P-wetherbeei_contig17408:812..1087+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17408.2.1 ID=mRNA_P-wetherbeei_contig17408.2.1|Name=mRNA_P-wetherbeei_contig17408.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig17408:812..1087+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCGCCTCGCTCGAGAAGTCCACGTCGGCCGCACCAACGACGGCCGA GCAGTTCGCCAACTATGTGCAAAAGACCTATGGGCGGTATCCCCTCACAA TGGTCCGCGGTAAGGGCTGCAAGCTGTACGATGCCGACGGAAAGGAGTAT TTGGACTTCGTCGCCGGCATTGCCACTTGCGCGCTCGGCCACAGTCACGA CGGGCTGACGAAGGCCGTCACGGAGCAAATGTCCATGATGCATCATGTCA GCAATCTCTATTACATTCCTCAACAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17408:812..1087+

>mRNA_P-wetherbeei_contig17408.2.1 ID=mRNA_P-wetherbeei_contig17408.2.1|Name=mRNA_P-wetherbeei_contig17408.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig17408:812..1087+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCGCCTCGCTCGAGAAGTCCACGTCGGCCGCACCAACGACGGCCGA
GCAGTTCGCCAACTATGTGCAAAAGACCTATGGGCGGTATCCCCTCACAA
TGGTCCGCGGTAAGGGCTGCAAGCTGTACGATGCCGACGGAAAGGAGTAT
TTGGACTTCGTCGCCGGCATTGCCACTTGCGCGCTCGGCCACAGTCACGA
CGGGCTGACGAAGGCCGTCACGGAGCAAATGTCCATGATGCATCATGTCA
GCAATCTCTATTACATTCCTCAACAG
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