mRNA_P-wetherbeei_contig17397.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: A0A7C4XS96_9HYPH (TIGR02301 family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XS96_9HYPH) HSP 1 Score: 162 bits (411), Expect = 2.750e-49 Identity = 84/120 (70.00%), Postives = 100/120 (83.33%), Query Frame = 1
Query: 37 TSALALVAAIALAHPLSAQTVEKPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
T LAL+A PL AQ + KPYDDRL+RLSEILGA+HYLRELC ANEGQ WRDRMREL++AEG++ALRRA+LTRSFNQGY SYS+T++ CT TAQ+AI RF+ EG QIA+ LVR+IP
Sbjct: 13 TMLLALMATAP--RPLLAQDI-KPYDDRLLRLSEILGAIHYLRELCGANEGQLWRDRMRELLDAEGTSALRRAKLTRSFNQGYNSYSRTYRACTPTAQTAISRFLAEGEQIADGLVRTIP 129
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: A0A109B9K1_HYPSL (Uncharacterized protein n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109B9K1_HYPSL) HSP 1 Score: 158 bits (399), Expect = 2.680e-47 Identity = 79/126 (62.70%), Postives = 98/126 (77.78%), Query Frame = 1
Query: 19 RRLSCRTSALALVAAIALAHPLSAQTVEKPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
RR + R + LV ALA P +A KPYD+RL RLSEILGA+HYLRELC A EGQ WRDRM EL+++EG++ALR+ARLTRSFN+GY SYS+T+ C+ +AQSAI RF+ EGA IA+ LVRS+P
Sbjct: 16 RRHALRRLGVGLVLITALALPAAAAPDSKPYDERLFRLSEILGAIHYLRELCGAEEGQQWRDRMSELLQSEGTSALRKARLTRSFNKGYQSYSRTYNTCSPSAQSAINRFITEGATIADTLVRSVP 141
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: A0A433B4R5_HYPSQ (TIGR02301 family protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A433B4R5_HYPSQ) HSP 1 Score: 154 bits (390), Expect = 5.880e-46 Identity = 77/132 (58.33%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 1 NVMRKCRRLSCRTSALALVAAIALAHPLSAQTVEKPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
NV R+ R L AL+++ + A + A + KPYDDRLMRLSEILGAVHYLRELC ANEGQ WRDRMR+L++AEGS ALRRA+LTR+FNQGY SYS+T+ C+ +AQ+AI RF++EG+++++ L+++ P
Sbjct: 7 NVKRRSRYLVAPVLALSVLFSGAGGSSVMAASDTKPYDDRLMRLSEILGAVHYLRELCGANEGQYWRDRMRDLMDAEGSTALRRAKLTRAFNQGYRSYSRTYNTCSPSAQTAINRFLSEGSELSDGLLKAFP 138
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: A0A2W4KV70_9PROT (TIGR02301 family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KV70_9PROT) HSP 1 Score: 153 bits (387), Expect = 1.440e-45 Identity = 76/129 (58.91%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 10 RKCRRLSCRTSALALVAAIALAHPLSAQTVEKPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
++C S R ALA+ A + +T KPYDD+LMRLSEILGAVHYLRELC A+EGQ WRDRMRELIEAEG+ ALRRARLTRSFN+GY YS+T++ CT +A++A++RF+ E +Q+ E L++++P
Sbjct: 8 KRCVFASARRLALAMPFVFAAGTAFAQET--KPYDDKLMRLSEILGAVHYLRELCGADEGQLWRDRMRELIEAEGTTALRRARLTRSFNKGYQGYSRTYRTCTPSAETAVKRFLTEASQLTENLMKNVP 134
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: UPI001FE711DE (TIGR02301 family protein n=1 Tax=Hyphomicrobium methylovorum TaxID=84 RepID=UPI001FE711DE) HSP 1 Score: 153 bits (386), Expect = 2.790e-45 Identity = 72/116 (62.07%), Postives = 98/116 (84.48%), Query Frame = 1
Query: 52 LVAAIALAHPLSAQTVE-KPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
+ + +A P +A VE KPYDDRL+RLSEILGAVH+LRELCSANEGQ WRDRMRE+++AEGS+ALRRA+LTR+FNQGY SYS+T+ C+ +AQ+A+ RF+ EG++++E L+++ P
Sbjct: 29 VTVGLPIAMPQTAAAVETKPYDDRLLRLSEILGAVHFLRELCSANEGQYWRDRMREIMDAEGSSALRRAKLTRAFNQGYRSYSRTYNTCSPSAQTAVMRFLKEGSELSEGLLKAFP 144
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: UPI0019AE720C (TIGR02301 family protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019AE720C) HSP 1 Score: 152 bits (384), Expect = 3.520e-45 Identity = 74/112 (66.07%), Postives = 90/112 (80.36%), Query Frame = 1
Query: 61 AIALAHPLSAQTVEKPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
A+A P +A KPYDDRL RLSEILGAVHYLRELC A EGQ WR+RM EL+++EGS ALR+A+LTRSFN+GY SYS+T+ C+ +AQSAI RF+ EGA IA+ LVRS+P
Sbjct: 18 AVATMLPAAAAPDGKPYDDRLFRLSEILGAVHYLRELCGAEEGQQWRERMAELVQSEGSTALRKAKLTRSFNKGYQSYSRTYNTCSPSAQSAINRFITEGATIADTLVRSVP 129
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: UPI001FCD0FC3 (TIGR02301 family protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI001FCD0FC3) HSP 1 Score: 151 bits (382), Expect = 4.600e-45 Identity = 70/115 (60.87%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 52 LVAAIALAHPLSAQTVEKPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
++A +++A P +A KPYDDRL RLSEILGAVHYLRELC A+EGQ WR+RM +L+++EG++ALR+A+LTRSFN+GY SYS+T+ C+ +AQ+ I RF+ EGA IA+ LVRS+P
Sbjct: 1 MLAGVSMALPAAAAPDSKPYDDRLFRLSEILGAVHYLRELCGADEGQLWRERMTDLLQSEGTSALRKAKLTRSFNKGYQSYSRTYNTCSPSAQNVINRFVTEGAAIADTLVRSVP 115
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: UPI001FD9E2B7 (TIGR02301 family protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI001FD9E2B7) HSP 1 Score: 152 bits (383), Expect = 7.480e-45 Identity = 80/131 (61.07%), Postives = 100/131 (76.34%), Query Frame = 1
Query: 19 RRLSCRTSALALVAAIAL-----AHPLSAQTVEKPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
RR S + LAL AA++L + ++A KPYDD+LMRL+EILGAVHYLRELCSAN+GQ WRDRM+EL++ EG ALRRARLTRSFNQGY SY +T+ CT TAQS+I+RF+ EG QI + LV++ P
Sbjct: 12 RRPSIKGMLLALGAALSLVGGGASGAVAAPGDTKPYDDKLMRLAEILGAVHYLRELCSANDGQVWRDRMKELLDTEGGTALRRARLTRSFNQGYRSYRRTYVTCTPTAQSSIERFLAEGIQIGDGLVKNTP 142
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: F8J9W4_HYPSM (Uncharacterized protein n=2 Tax=Hyphomicrobium TaxID=81 RepID=F8J9W4_HYPSM) HSP 1 Score: 151 bits (381), Expect = 1.070e-44 Identity = 73/129 (56.59%), Postives = 101/129 (78.29%), Query Frame = 1
Query: 10 RKCRRLSCRTSALALVAAIALAHPLSAQTVEKPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
R CR+L C+ + ++A A+ A + KPYDDRLMRLSEILGA+HYLRELC ANEGQ WRDRM +L+ AEGS ALRRA+LTR+FNQGY SYS+T+ C+ +AQ+AI RF++EG+++++ ++++ P
Sbjct: 3 RHCRKL-CQYLVMLMLALSAVGGQAFAASDSKPYDDRLMRLSEILGAIHYLRELCGANEGQYWRDRMHDLMNAEGSTALRRAKLTRAFNQGYRSYSRTYNTCSPSAQTAITRFLSEGSELSDGMLKAFP 130
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Match: A0A2S5MDR5_HYPSQ (TIGR02301 family protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MDR5_HYPSQ) HSP 1 Score: 151 bits (381), Expect = 1.370e-44 Identity = 76/138 (55.07%), Postives = 102/138 (73.91%), Query Frame = 1
Query: 7 MRKCRRLSCRTSA--------LALVAAIALAHPLSAQTVEKPYDDRLMRLSEILGAVHYLRELCSANEGQAWRDRMRELIEAEGSNALRRARLTRSFNQGYYSYSKTHKICTTTAQSAIQRFMNEGAQIAEVLVRSIP 396
M +C++++ R A +A+ + P+ A KPYD++LMRLSEILGAVHYLRELC ANEGQ WRDRMR+LI+AE + ALRRARLTR+FNQGY SYS+T+ C+ +AQ+AI RF+ EGA+++E LV++ P
Sbjct: 1 MNQCQKMTSRKDAKRQAFCSIIAITISWLAVLPVQAAPDTKPYDEKLMRLSEILGAVHYLRELCGANEGQYWRDRMRDLIDAESATALRRARLTRAFNQGYRSYSRTYNTCSPSAQTAITRFLGEGAELSEGLVKAFP 138 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17397.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17397.1.1 >prot_P-wetherbeei_contig17397.1.1 ID=prot_P-wetherbeei_contig17397.1.1|Name=mRNA_P-wetherbeei_contig17397.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp MRKCRRLSCRTSALALVAAIALAHPLSAQTVEKPYDDRLMRLSEILGAVHback to top mRNA from alignment at P-wetherbeei_contig17397:106..504- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17397.1.1 ID=mRNA_P-wetherbeei_contig17397.1.1|Name=mRNA_P-wetherbeei_contig17397.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig17397:106..504- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17397:106..504- >mRNA_P-wetherbeei_contig17397.1.1 ID=mRNA_P-wetherbeei_contig17397.1.1|Name=mRNA_P-wetherbeei_contig17397.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig17397:106..504- (Phaeothamnion wetherbeei SAG_119_79)back to top |