mRNA_P-wetherbeei_contig17367.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A1F3YG62_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YG62_9PROT) HSP 1 Score: 176 bits (447), Expect = 2.010e-53 Identity = 83/104 (79.81%), Postives = 92/104 (88.46%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVDIEVLRSA+AW GHRVT TIVKTWGSAPRPVGAL+V+RDDG V GS+SGGCVEDDLIEKV+AG +AKD+P + TYGVTNEEA RWGLPCGGTL +VL
Sbjct: 1 MDSVDIEVLRSAEAWRKAGHRVTFGTIVKTWGSAPRPVGALVVVRDDGQVVGSLSGGCVEDDLIEKVRAGAVAKDRPQVITYGVTNEEATRWGLPCGGTLVVVL 104
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A521YGV1_9PROT (XdhC family protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521YGV1_9PROT) HSP 1 Score: 172 bits (435), Expect = 8.110e-51 Identity = 79/104 (75.96%), Postives = 91/104 (87.50%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVDIEVLR+AQAW+ GGHRV L TIVKTWGSAPRPVGA++ +R DG V GSVSGGCVE+DLIEK+KA +A +KP + TYGVTNEEA RWGLPCGGTLQ+V+
Sbjct: 1 MDSVDIEVLRTAQAWLTGGHRVALGTIVKTWGSAPRPVGAMVAVRGDGQVVGSVSGGCVEEDLIEKIKARSIAAEKPQLVTYGVTNEEATRWGLPCGGTLQVVM 104
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A536SKC9_9PROT (XdhC_CoxI domain-containing protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SKC9_9PROT) HSP 1 Score: 165 bits (418), Expect = 2.780e-50 Identity = 78/104 (75.00%), Postives = 88/104 (84.62%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVD+EV+RSA W GHR TL T+V TWGSAPRPVGA+LVIRDDG V GSVSGGCVEDDLI+KVKA +A DKP +TTYGVT E+A R+GLPCGGTLQ+VL
Sbjct: 1 MDSVDLEVVRSALKWTESGHRATLGTVVHTWGSAPRPVGAMLVIRDDGQVMGSVSGGCVEDDLIDKVKAKAIAADKPEVTTYGVTQEQATRYGLPCGGTLQIVL 104
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A1F4AX31_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AX31_9PROT) HSP 1 Score: 169 bits (427), Expect = 1.350e-49 Identity = 77/104 (74.04%), Postives = 92/104 (88.46%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVDIEVLRSA+AW GHRVTL TIVKTWGSAPRPVGA++ IRDDG V+GSVSGGCVEDDLIE+V+A +A ++P + TYG++NE+A RWGLPCGGTL++VL
Sbjct: 1 MDSVDIEVLRSAEAWRRAGHRVTLGTIVKTWGSAPRPVGAMVAIRDDGQVAGSVSGGCVEDDLIERVRAHAVAAERPQLVTYGISNEDATRWGLPCGGTLEVVL 104
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A1F4F5X8_9PROT (Uncharacterized protein n=6 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F5X8_9PROT) HSP 1 Score: 168 bits (426), Expect = 1.910e-49 Identity = 79/104 (75.96%), Postives = 90/104 (86.54%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVDIEVLR+A+ W GHRVTL TIVKTWGSAPRP+GA++ IRDDG V+GSVSGGCVEDDLIEKV+A LA KP + TYGV+NE+A RWGLPCGGTLQ+VL
Sbjct: 1 MDSVDIEVLRNAEDWRKAGHRVTLGTIVKTWGSAPRPIGAMVAIRDDGQVTGSVSGGCVEDDLIEKVRAKALAAAKPQLVTYGVSNEDATRWGLPCGGTLQVVL 104
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A0S8B5A2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B5A2_9PROT) HSP 1 Score: 168 bits (425), Expect = 2.840e-49 Identity = 81/104 (77.88%), Postives = 91/104 (87.50%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVDIEVLRSA+AW G R TL TIVKTWGSAPRPVGA++VIRDDGLV GSVSGGCVEDDLIEKV+A +A ++P + TYGVTNEEA R+GLPCGGTLQ+VL
Sbjct: 1 MDSVDIEVLRSAEAWRKEGRRATLGTIVKTWGSAPRPVGAMVVIRDDGLVIGSVSGGCVEDDLIEKVRAQAVAAERPQLVTYGVTNEEATRYGLPCGGTLQVVL 104
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A536SB35_9PROT (XdhC_CoxI domain-containing protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SB35_9PROT) HSP 1 Score: 161 bits (408), Expect = 1.290e-48 Identity = 75/104 (72.12%), Postives = 85/104 (81.73%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVDIEVLR+A+ W GHR L TIV+TWGSAPRP+GA++ IRDDG + GSVSGGCVEDDL+EKVK A KP + TYGVTNEEA RWGLPCGGTL+LVL
Sbjct: 1 MDSVDIEVLRTAEEWRKNGHRAALGTIVRTWGSAPRPIGAMVAIRDDGQIVGSVSGGCVEDDLVEKVKEKFAAAKKPELVTYGVTNEEATRWGLPCGGTLELVL 104
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A1F4EY13_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EY13_9PROT) HSP 1 Score: 165 bits (418), Expect = 3.030e-48 Identity = 79/104 (75.96%), Postives = 88/104 (84.62%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVDIEVLR+A+AW G R TL TI+KTWGSAPRPVGA++ IRDDG VSGSVSGGCVEDDLI+KVK+ +A P + TYGVTNEEA RWGLPCGGTLQLVL
Sbjct: 1 MDSVDIEVLRTAEAWRMAGRRGTLGTIIKTWGSAPRPVGAMVAIRDDGQVSGSVSGGCVEDDLIDKVKSKAVAAKAPQLITYGVTNEEATRWGLPCGGTLQLVL 104
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A537CL52_9PROT (XdhC family protein n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CL52_9PROT) HSP 1 Score: 165 bits (417), Expect = 4.180e-48 Identity = 80/104 (76.92%), Postives = 88/104 (84.62%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVDIEVLR+A+AW G RV L TIVKTWGSAPRPVGA++ IRDDG V GSVSGGCVEDDLI+KVK+ +A KP + TYGVTNEEA RWGLPCGGTLQLVL
Sbjct: 1 MDSVDIEVLRTAEAWRKQGRRVALGTIVKTWGSAPRPVGAMVAIRDDGQVVGSVSGGCVEDDLIDKVKSRVVAATKPELVTYGVTNEEATRWGLPCGGTLQLVL 104
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Match: A0A536SFC0_9PROT (XdhC family protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SFC0_9PROT) HSP 1 Score: 162 bits (410), Expect = 6.120e-48 Identity = 77/104 (74.04%), Postives = 86/104 (82.69%), Query Frame = 1
Query: 1 MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVSGSVSGGCVEDDLIEKVKAGGLAKDKPAITTYGVTNEEANRWGLPCGGTLQLVL 312
MDSVDIEVLR+A+AW GH V L TIVKTWGSAPRPVGA++ IRDDG ++GSVSGGCVEDDL+EKVK KP + TYGVTNEEA RWGLPCGGTLQLV+
Sbjct: 1 MDSVDIEVLRTAEAWRKQGHAVALGTIVKTWGSAPRPVGAMVAIRDDGQITGSVSGGCVEDDLVEKVKEKFARAAKPELVTYGVTNEEATRWGLPCGGTLQLVV 104 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17367.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17367.1.1 >prot_P-wetherbeei_contig17367.1.1 ID=prot_P-wetherbeei_contig17367.1.1|Name=mRNA_P-wetherbeei_contig17367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp MDSVDIEVLRSAQAWMAGGHRVTLATIVKTWGSAPRPVGALLVIRDDGLVback to top mRNA from alignment at P-wetherbeei_contig17367:2..313- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17367.1.1 ID=mRNA_P-wetherbeei_contig17367.1.1|Name=mRNA_P-wetherbeei_contig17367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig17367:2..313- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17367:2..313- >mRNA_P-wetherbeei_contig17367.1.1 ID=mRNA_P-wetherbeei_contig17367.1.1|Name=mRNA_P-wetherbeei_contig17367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig17367:2..313- (Phaeothamnion wetherbeei SAG_119_79)back to top |