mRNA_P-wetherbeei_contig17360.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17360.2.1
Unique NamemRNA_P-wetherbeei_contig17360.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A6I3F3Y8_9ACTN (Purine-nucleoside phosphorylase n=4 Tax=root TaxID=1 RepID=A0A6I3F3Y8_9ACTN)

HSP 1 Score: 264 bits (675), Expect = 2.100e-87
Identity = 129/149 (86.58%), Postives = 136/149 (91.28%), Query Frame = 1
Query:    1 CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVLLL 447
            CGGAGIV+ GFDVGHVIVPTGA+RDEGTSYHYAP D  VAPHPRALAAID VL+EAGVPHDRGL WTTDAFFRETPAKVARRREQGCL V+MEASAMFA AAFRG  YGQLLYAGDDVSAAEWDHR+W+ QTSARDRLLDLALD V+ L
Sbjct:  104 CGGAGIVKSGFDVGHVIVPTGAVRDEGTSYHYAPFDVEVAPHPRALAAIDDVLTEAGVPHDRGLVWTTDAFFRETPAKVARRREQGCLVVDMEASAMFACAAFRGATYGQLLYAGDDVSAAEWDHRHWDTQTSARDRLLDLALDTVVRL 252          
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A6I3WWV8_9ACTN (PNP_UDP_1 domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3WWV8_9ACTN)

HSP 1 Score: 261 bits (667), Expect = 4.080e-86
Identity = 127/149 (85.23%), Postives = 138/149 (92.62%), Query Frame = 1
Query:    1 CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVLLL 447
            CGGAGIVR GFD+GHVIVPT A+RDEGTSYHYAP +A VAPHPRALAAID VLSEAGVPHDRGLTWTTDAFFRET AKVARRR+QGC+ VEMEA+AMFAAAAFRGVVYGQLLYAGDDVS+A+WDHR+WE Q+SARD LLDLAL AV+ L
Sbjct:  109 CGGAGIVRAGFDIGHVIVPTSAVRDEGTSYHYAPPEATVAPHPRALAAIDDVLSEAGVPHDRGLTWTTDAFFRETEAKVARRRDQGCITVEMEAAAMFAAAAFRGVVYGQLLYAGDDVSSAQWDHRHWEKQSSARDHLLDLALAAVIRL 257          
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A7K1B8S1_9ACTN (PNP_UDP_1 domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K1B8S1_9ACTN)

HSP 1 Score: 260 bits (664), Expect = 1.730e-85
Identity = 125/149 (83.89%), Postives = 134/149 (89.93%), Query Frame = 1
Query:    1 CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVLLL 447
            CGGAGIVRPGFD+GHVIVPTGAIRDEGTSYHYAPA   V PHPRAL+ ID VL+E GVPHDRGLTWTTDA +RETPAKVARRREQGC+ VEMEASAMFA A+FRG VYGQLLYAGDDVSAAEWDHR+W HQ SAR+RLLDLALDA + L
Sbjct:  121 CGGAGIVRPGFDLGHVIVPTGAIRDEGTSYHYAPAHTAVLPHPRALSVIDDVLTEGGVPHDRGLTWTTDAVYRETPAKVARRREQGCITVEMEASAMFACASFRGAVYGQLLYAGDDVSAAEWDHRHWNHQHSARERLLDLALDAAIRL 269          
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A6J7UQY8_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J7UQY8_9ZZZZ)

HSP 1 Score: 238 bits (608), Expect = 3.790e-78
Identity = 114/149 (76.51%), Postives = 127/149 (85.23%), Query Frame = 1
Query:    1 CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVLLL 447
            CGGAGIV+ GFDVGH+IVPTGA+RDEGTS+HY P D  V PHP A+ AID  L EAGVPHD+GLTWTTDA FRETP KVARRREQGC++VEMEASAMFA A FRG VYGQLLYAGDDVSA  WDHR+WE QTS R+R+L+LAL+AV  L
Sbjct:   38 CGGAGIVKQGFDVGHIIVPTGAVRDEGTSHHYQPVDVAVVPHPLAVEAIDAELLEAGVPHDKGLTWTTDAIFRETPEKVARRREQGCISVEMEASAMFAVAMFRGAVYGQLLYAGDDVSAQTWDHRHWEKQTSVRERVLELALNAVCRL 186          
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A6J7RRW7_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J7RRW7_9ZZZZ)

HSP 1 Score: 238 bits (608), Expect = 3.530e-77
Identity = 114/149 (76.51%), Postives = 127/149 (85.23%), Query Frame = 1
Query:    1 CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVLLL 447
            CGGAGIV+ GFDVGH+IVPTGA+RDEGTS+HY P D  V PHP A+ AID  L EAGVPHD+GLTWTTDA FRETP KVARRREQGC++VEMEASAMFA A FRG VYGQLLYAGDDVSA  WDHR+WE QTS R+R+L+LAL+AV  L
Sbjct:  106 CGGAGIVKQGFDVGHIIVPTGAVRDEGTSHHYQPVDVAVVPHPLAVEAIDAELLEAGVPHDKGLTWTTDAIFRETPEKVARRREQGCISVEMEASAMFAVAMFRGAVYGQLLYAGDDVSAQTWDHRHWEKQTSVRERVLELALNAVCRL 254          
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A1V5RWU9_9CHLR (Purine nucleoside phosphorylase DeoD-type n=1 Tax=Chloroflexi bacterium ADurb.Bin325 TaxID=1852859 RepID=A0A1V5RWU9_9CHLR)

HSP 1 Score: 184 bits (467), Expect = 1.310e-55
Identity = 87/147 (59.18%), Postives = 109/147 (74.15%), Query Frame = 1
Query:    1 CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVL 441
            CGGAG++     VGHV++P  A+RDEGTSYHY      V P P A+AAI++VL   GVP+ +G TWTTD F+RETP KVA RR +GCL VEMEA+A FA A FRGV +GQ+LY GDDVS AEWDHR+W  +T+ R+RL  LA++A +
Sbjct:  107 CGGAGVLDREIAVGHVVIPVSAVRDEGTSYHYLAPGREVTPDPAAVAAIEQVLQAHGVPYVKGKTWTTDGFYRETPDKVALRRAEGCLTVEMEAAAFFAVAQFRGVQFGQMLYGGDDVSGAEWDHRDWHRRTTLRERLFWLAVEAAI 253          
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A1V5VL77_9CHLR (Purine nucleoside phosphorylase DeoD-type n=1 Tax=Chloroflexi bacterium ADurb.Bin222 TaxID=1852858 RepID=A0A1V5VL77_9CHLR)

HSP 1 Score: 180 bits (457), Expect = 3.010e-54
Identity = 87/149 (58.39%), Postives = 106/149 (71.14%), Query Frame = 1
Query:    1 CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVLLL 447
            CGGAG++      GHV++P  A+RDEGTSYHY P    V   P A+A ++RVL   GVP+  G TWTTD F+RETP KVARRR +GCL VEME +A FA A FRGV + QLLY GDDVS A+WDHR+WE +T  R+RL  LA++A L L
Sbjct:  109 CGGAGVLNRDIAAGHVVIPQSAVRDEGTSYHYLPPSREVEGDPAAIATLERVLQRHGVPYLVGKTWTTDGFYRETPDKVARRRAEGCLTVEMETAAFFALAQFRGVRFAQLLYGGDDVSGADWDHRDWEKRTPVRERLFWLAVEACLEL 257          
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A2E0L514_9CHLR (Purine-nucleoside phosphorylase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0L514_9CHLR)

HSP 1 Score: 177 bits (449), Expect = 4.340e-53
Identity = 85/149 (57.05%), Postives = 105/149 (70.47%), Query Frame = 1
Query:    1 CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVLLL 447
            CGGAG++     VGH++VPT A+RDEGTSYHY PA   V P P  +AAI+  LS    P+  G TWTTDA +RETPA++ARRR +GCL VEMEA+A FA A FRGV + Q+LY+GDD+S  EW  RNW  QTS R  L  L+++A L L
Sbjct:  106 CGGAGVLNGDLVVGHLVVPTSAVRDEGTSYHYLPAGREVGPSPEGIAAIEATLSAHQAPYVTGKTWTTDAIYRETPARMARRRNEGCLTVEMEAAAFFAVAQFRGVTFAQILYSGDDLSGPEWGSRNWGKQTSTRQNLFWLSVEAALRL 254          
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A6L9INX2_9CHLR (Nucleoside phosphorylase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L9INX2_9CHLR)

HSP 1 Score: 174 bits (441), Expect = 3.910e-52
Identity = 84/149 (56.38%), Postives = 104/149 (69.80%), Query Frame = 1
Query:    1 CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVLLL 447
            CGGAG++     VGHV+VPT A+RDEGTSYHY P    VAP    +AAI+  L+   +P+  G TWTTDA +RETPAK+ARRR +GCL VEMEA+A FA A FR V + QLLY GDDV    WDHR W  QTS R++L  LA+++ + L
Sbjct:   86 CGGAGVLDSSIPVGHVVVPTSAVRDEGTSYHYLPPGREVAPSAAGVAAIEATLTANDIPYLTGKTWTTDAIYRETPAKIARRRGEGCLTVEMEAAAFFAVAQFREVTFAQLLYGGDDVGGDTWDHRGWVAQTSTREKLFWLAVESAVRL 234          
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Match: A0A1G0FPB8_9GAMM (PNP_UDP_1 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RBG_16_66_13 TaxID=1798267 RepID=A0A1G0FPB8_9GAMM)

HSP 1 Score: 174 bits (442), Expect = 4.170e-52
Identity = 88/146 (60.27%), Postives = 103/146 (70.55%), Query Frame = 1
Query:    4 GGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAIDRVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAAAAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVL 441
            GG G++     VG+VI+P GA+RDEGTSYHY P    V P P ALAA++  L   G P   G TWTTDA +RETPAKVA RR +GCLAVEMEASA FA AAFRGV +GQLLYAGDDV    WD R W+ Q + R+RL  LA++A L
Sbjct:  101 GGCGVLESSLPVGYVILPNGAVRDEGTSYHYLPPGREVGPSPVALAALEATLIRNGQPFIVGKTWTTDAPYRETPAKVALRRAEGCLAVEMEASAFFAVAAFRGVTFGQLLYAGDDVGGEAWDPRGWDRQAAVRERLFWLAVEACL 246          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17360.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3F3Y8_9ACTN2.100e-8786.58Purine-nucleoside phosphorylase n=4 Tax=root TaxID... [more]
A0A6I3WWV8_9ACTN4.080e-8685.23PNP_UDP_1 domain-containing protein n=2 Tax=root T... [more]
A0A7K1B8S1_9ACTN1.730e-8583.89PNP_UDP_1 domain-containing protein n=2 Tax=root T... [more]
A0A6J7UQY8_9ZZZZ3.790e-7876.51Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A6J7RRW7_9ZZZZ3.530e-7776.51Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A1V5RWU9_9CHLR1.310e-5559.18Purine nucleoside phosphorylase DeoD-type n=1 Tax=... [more]
A0A1V5VL77_9CHLR3.010e-5458.39Purine nucleoside phosphorylase DeoD-type n=1 Tax=... [more]
A0A2E0L514_9CHLR4.340e-5357.05Purine-nucleoside phosphorylase n=1 Tax=Anaeroline... [more]
A0A6L9INX2_9CHLR3.910e-5256.38Nucleoside phosphorylase n=1 Tax=Chloroflexi bacte... [more]
A0A1G0FPB8_9GAMM4.170e-5260.27PNP_UDP_1 domain-containing protein n=1 Tax=Gammap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17360contigP-wetherbeei_contig17360:985..1437 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1211815.CBYP010000040_gene2553
PFAMsPNP_UDP_1
Model size453
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.67e-50
EggNOG OGsCOG2820@1|root,COG2820@2|Bacteria,2IT3V@201174|Actinobacteria
DescriptionPhosphorylase superfamily
Cds size453
COG categoryF
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186115.3799126-CDS-P-wetherbeei_contig17360:984..14371683186115.3799126-CDS-P-wetherbeei_contig17360:984..1437Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17360 985..1437 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17360.2.1prot_P-wetherbeei_contig17360.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17360 985..1437 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17360.2.1

>prot_P-wetherbeei_contig17360.2.1 ID=prot_P-wetherbeei_contig17360.2.1|Name=mRNA_P-wetherbeei_contig17360.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp
CGGAGIVRPGFDVGHVIVPTGAIRDEGTSYHYAPADAVVAPHPRALAAID
RVLSEAGVPHDRGLTWTTDAFFRETPAKVARRREQGCLAVEMEASAMFAA
AAFRGVVYGQLLYAGDDVSAAEWDHRNWEHQTSARDRLLDLALDAVLLLE
*
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mRNA from alignment at P-wetherbeei_contig17360:985..1437-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17360.2.1 ID=mRNA_P-wetherbeei_contig17360.2.1|Name=mRNA_P-wetherbeei_contig17360.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig17360:985..1437- (Phaeothamnion wetherbeei SAG_119_79)
TGTGGGGGAGCGGGGATCGTGCGACCCGGCTTCGACGTCGGCCACGTCAT CGTGCCGACGGGCGCCATCCGTGACGAGGGCACCTCGTACCACTACGCGC CCGCCGACGCCGTGGTGGCACCGCACCCGCGTGCGCTGGCGGCGATCGAT CGCGTCCTGTCCGAAGCCGGCGTGCCCCACGACCGCGGACTCACCTGGAC CACCGACGCGTTCTTCCGCGAGACCCCGGCCAAGGTGGCCCGCCGACGCG AGCAGGGCTGCTTGGCTGTGGAGATGGAGGCCTCGGCGATGTTCGCCGCC GCCGCCTTCCGGGGCGTCGTCTACGGGCAACTCCTCTACGCAGGCGATGA CGTCAGCGCCGCCGAGTGGGACCACCGCAACTGGGAGCACCAGACCAGCG CTCGCGACCGCCTGCTCGACCTCGCCCTCGACGCTGTCCTGCTCCTCGAG TAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17360:985..1437-

>mRNA_P-wetherbeei_contig17360.2.1 ID=mRNA_P-wetherbeei_contig17360.2.1|Name=mRNA_P-wetherbeei_contig17360.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig17360:985..1437- (Phaeothamnion wetherbeei SAG_119_79)
TGTGGGGGAGCGGGGATCGTGCGACCCGGCTTCGACGTCGGCCACGTCAT
CGTGCCGACGGGCGCCATCCGTGACGAGGGCACCTCGTACCACTACGCGC
CCGCCGACGCCGTGGTGGCACCGCACCCGCGTGCGCTGGCGGCGATCGAT
CGCGTCCTGTCCGAAGCCGGCGTGCCCCACGACCGCGGACTCACCTGGAC
CACCGACGCGTTCTTCCGCGAGACCCCGGCCAAGGTGGCCCGCCGACGCG
AGCAGGGCTGCTTGGCTGTGGAGATGGAGGCCTCGGCGATGTTCGCCGCC
GCCGCCTTCCGGGGCGTCGTCTACGGGCAACTCCTCTACGCAGGCGATGA
CGTCAGCGCCGCCGAGTGGGACCACCGCAACTGGGAGCACCAGACCAGCG
CTCGCGACCGCCTGCTCGACCTCGCCCTCGACGCTGTCCTGCTCCTCGAG
TAG
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