mRNA_P-wetherbeei_contig17350.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17350.1.1
Unique NamemRNA_P-wetherbeei_contig17350.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A3D5DH20_9GAMM (Amidase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DH20_9GAMM)

HSP 1 Score: 301 bits (770), Expect = 5.790e-97
Identity = 145/240 (60.42%), Postives = 178/240 (74.17%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            SVMAGPD RVPI+L E G  F  PL  D++G+R AW+P+LG   VD +V AVLE+ALPVF +LG  +D A PDL+DA E+F   RAW F A+FG D+  +   +KDTV WNIE+GL LTL D+T A  K + LV R+A FF  +D LLCPS QVPPFP++Q+WV +ING EL TYLDWM VC+AITVTGCPAISVPAGFT SGLP+G+QIVG R  D  VL++A+ FE  T+   RRP+L
Sbjct:  257 SVMAGPDQRVPISLSEPGIDFLGPLVCDVKGMRFAWSPDLGGNPVDPKVTAVLEQALPVFEDLGGFIDAADPDLQDAKEIFSTFRAWMFLAKFGEDYGERGHLMKDTVRWNIEEGLKLTLADLTAATTKHATLVERIAGFFDIYDILLCPSAQVPPFPLDQQWVHSINGIELETYLDWMAVCWAITVTGCPAISVPAGFTESGLPIGIQIVGARGCDRQVLEVAYAFEQVTQQARRRPAL 496          
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: W4L9C8_9BACT (Amidase domain-containing protein (Fragment) n=3 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4L9C8_9BACT)

HSP 1 Score: 280 bits (715), Expect = 8.370e-91
Identity = 134/240 (55.83%), Postives = 168/240 (70.00%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            S +AGPDPRVP AL      FR PL RDLRG+R+AW+ +LG++ VDA +  V +     F  +GC+++ A PDLRDAD +F+ +RA+ FA R        R  LK TV+WN EQGL LT  D+ +AE  R+ L  RVAAFF H+D+L  P+TQVPPF IEQE+   ING++L TY+DWMG+CYAITVTGCP+ISVP GFT  GLPVGLQIVGP   D+ VLQLAH FE AT    ++P +
Sbjct:   91 SAIAGPDPRVPSALPFPADVFRAPLERDLRGVRVAWSRDLGRYPVDAVITRVCDAQRSTFESIGCRVEEAEPDLRDADHIFQTVRAYSFAHRHETHLAENRHQLKATVIWNAEQGLQLTALDIARAEAMRTSLYQRVAAFFEHYDYLCTPTTQVPPFSIEQEYPTEINGQQLETYIDWMGLCYAITVTGCPSISVPCGFTPDGLPVGLQIVGPPHADVDVLQLAHAFEQATMFYRQKPQV 330          
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A2V9J156_9BACT (Amidase n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9J156_9BACT)

HSP 1 Score: 283 bits (723), Expect = 9.170e-90
Identity = 133/240 (55.42%), Postives = 171/240 (71.25%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            +VMAGPDPR PI++ E GA FR PL  DL+G R+AW+ NLG++ V   V  V ++A  +F +LGC +++A PD  DA+E F+VLR W +A   G D    R  +KDTV+WNIEQGL L+  D+++AE KRS L  RV  FF H+ FL+ P +QV PFP+E EWV+ ING ++ TY+DWM  CYAIT+TG PAISVP GF+A GLP+GLQIVG   QD +VLQ AH FE AT+ G RRP +
Sbjct:  268 AVMAGPDPRAPISIDEPGAVFRRPLKSDLKGARVAWSRNLGKYPVQPLVNQVCDKARQIFLDLGCHVEDAEPDFSDANEAFQVLRGWTYAQNRGEDLRTNRHLMKDTVIWNIEQGLKLSGLDISRAEAKRSMLYQRVREFFEHYQFLILPVSQVVPFPVEVEWVKEINGVKMETYIDWMATCYAITLTGLPAISVPCGFSAEGLPIGLQIVGRHHQDFSVLQAAHAFEQATQFGKRRPPI 507          
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A6J4XB95_9DELT (Amidase family protein BBta_1912 n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XB95_9DELT)

HSP 1 Score: 275 bits (703), Expect = 3.540e-87
Identity = 131/240 (54.58%), Postives = 166/240 (69.17%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            S +AGPDPR PIA+ E G++F  PL RDL+G+R+AW+ +LG+F VD  V  VLE    VF +LGC ++   PD RDADE+F+V RAW F  + G   E+QR  +KDTV WNIEQG  L+  ++ QAEIKR+ L  RV  F   ++FL+CP  QVPPF I Q W++ I+G ++ TY+DWM  CY ITVTG PAISVP GFT  GLPVG+QIVG    D +VLQLAH FE AT    +RP +
Sbjct:  232 STIAGPDPRSPIAIAEPGSTFTRPLVRDLKGVRIAWSKDLGEFPVDPRVTQVLENQRHVFEDLGCIVEEGQPDFRDADEIFKVWRAWSFELQLGELMENQRELMKDTVTWNIEQGQKLSGPEIGQAEIKRTELYHRVREFMETYEFLICPVNQVPPFDINQRWIEEIDGVKMETYIDWMKSCYYITVTGLPAISVPCGFTPQGLPVGIQIVGRHNADFSVLQLAHAFEKATGFWKQRPPV 471          
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A076MPT3_AMYME (Amidase n=9 Tax=Pseudonocardiaceae TaxID=2070 RepID=A0A076MPT3_AMYME)

HSP 1 Score: 270 bits (690), Expect = 3.010e-85
Identity = 131/241 (54.36%), Postives = 167/241 (69.29%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLG-QFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            SV+AGPDPR PIAL E G +F  PL RD+RGLR+AW+P+LG    V+ EV  V+E +  VF +LGC ++   PD   ADE FR+LRAWQFA ++GP  + +R  +KDT+VWN E+GL L+  DV +AE+ R+ L  R   FF  +DFLL P +QVPPF  E E+   + G+++ TYLDWM   Y +TV+G PA+SVPAGFT  GLPVGLQIVGP   D AVLQL H FE AT    RRP++
Sbjct:  229 SVLAGPDPRSPIALDEPGETFARPLDRDVRGLRIAWSPDLGGSVPVEPEVADVVEASAKVFGDLGCVVERDCPDFAGADEAFRILRAWQFAVKYGPLLDTERDRIKDTIVWNTEEGLRLSATDVGRAEVLRTELFHRFREFFTRYDFLLLPVSQVPPFDAELEYPVRVAGQDMVTYLDWMRSAYFVTVSGSPALSVPAGFTPGGLPVGLQIVGPHRADFAVLQLGHAFEQATGAAQRRPAV 469          
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A2D5Z4A7_9BACT (Amidase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5Z4A7_9BACT)

HSP 1 Score: 270 bits (689), Expect = 4.370e-85
Identity = 131/240 (54.58%), Postives = 160/240 (66.67%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            S MAGPDPR PIA+ E G+ F  PL RDLRG+R+AW  NLG F VD+ V A ++     F +LGCK+D+  PD RDADE FRV RAW   ARFGP  +  R   KDT++WN+EQG  LT   + +AE KR++L  RV  F   ++FL+ P TQVPPF +   ++  I+G  L TY+DWM  CY ITVTG PAISVP GFT  GLPVG+QIVG    D  VLQ+AH FE AT  G RRP +
Sbjct:  229 SAMAGPDPRSPIAIREPGSVFAKPLDRDLRGVRVAWCGNLGDFPVDSRVTAAVDGERAAFEDLGCKIDDEHPDFRDADEAFRVWRAWALEARFGPMMQTHRDRFKDTIIWNVEQGAQLTGPQIARAEQKRTQLYHRVRRFMGTYEFLVLPVTQVPPFDVTCPYITEIDGVTLDTYIDWMKSCYYITVTGLPAISVPCGFTPEGLPVGVQIVGRHEDDFGVLQIAHAFEQATAVGRRRPEV 468          
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A7Y4X3I6_9DELT (Amidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4X3I6_9DELT)

HSP 1 Score: 268 bits (685), Expect = 1.740e-84
Identity = 131/240 (54.58%), Postives = 162/240 (67.50%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            SV+AGPD R P+++ E G  FR PL R+  G+R+AW+ +LG   VD  V AV+++   VF+ LGC +++A PDLRDADE FRV RAW F   FG      RAH+KDTV+WNIE+G  LT   + QAE KR+ L  RV  F   ++FL+ P +QVPPF ++Q +V  ING +L TYLDWM  CY ITVTG PAISVP GFT  GLPVG+QIVG    D  VLQLAH FE  T  G RRP +
Sbjct:  231 SVIAGPDSRAPLSISEPGERFRRPLERNFAGVRIAWSRDLGGLPVDPRVTAVIDKQRGVFAALGCAIEDAQPDLRDADETFRVWRAWLFELGFGEMLRTHRAHMKDTVIWNIEEGEKLTGPQIGQAERKRTELYQRVRQFMERYEFLILPVSQVPPFEVKQRYVTEINGVKLDTYLDWMRSCYYITVTGLPAISVPCGFTPEGLPVGVQIVGRHHDDFGVLQLAHAFEQVTGFGRRRPGV 470          
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A540VCA4_9CHLR (Amidase n=2 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VCA4_9CHLR)

HSP 1 Score: 266 bits (681), Expect = 7.140e-84
Identity = 130/241 (53.94%), Postives = 163/241 (67.63%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLG-QFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            S +AGPDPR PIA+ E+G  F  PL RD RG R+AW+P+LG  F VD  V   +   LPVF++LGC+++ A+PD RDADE F+  RAW F  ++G   +  R  +K+TVVWN+EQG  LT   + +AE+KR+ L  RV  F   ++FLL P +QVPPF + QE+V  ING  + TY+DWM  CY ITVTG PAISVP GFT  GLPVGLQIVG    DL VLQLA+ F+ AT    RRP L
Sbjct:  231 SAIAGPDPRSPIAIAESGTKFATPLERDFRGTRIAWSPDLGGSFPVDPRVTDAIREQLPVFADLGCQVEEAAPDFRDADEAFKAWRAWAFELQYGELVKAHRDQIKETVVWNVEQGARLTGPQLGRAEVKRTALYHRVRQFMETYEFLLLPVSQVPPFDVGQEYVTEINGVAMETYIDWMKSCYYITVTGLPAISVPCGFTPEGLPVGLQIVGRHQDDLGVLQLAYAFQQATETWKRRPPL 471          
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A2V7C8K8_9BACT (Amidase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7C8K8_9BACT)

HSP 1 Score: 268 bits (685), Expect = 7.160e-84
Identity = 133/240 (55.42%), Postives = 162/240 (67.50%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            +VMAGPDPR PIA+ E G  FR PL R  +G+R+AW+ +LG   VD  V AVL+R    F  LGC +++  PD  +A +VF+VLRA  FA R+GP     R  +KDTVVWNIE+GL LT +++ +AE+ R+RL  RV  F   H+FLL P+ QVPPF + Q +V  ING  L TY+DWM VC  ITVTG PAISVPAGFT  GLPVGLQIVG    +  VLQLAH FE AT    RRP L
Sbjct:  283 AVMAGPDPRSPIAISEPGDRFRAPLDRGFKGVRIAWSRDLGGLPVDRRVTAVLDRQRATFEALGCDVEDGQPDFGEARQVFQVLRALTFATRYGPLLAQHRHQMKDTVVWNIEEGLKLTAREIGEAEVARTRLYHRVREFMERHEFLLAPAAQVPPFDVSQPYVTEINGAPLPTYIDWMRVCSDITVTGLPAISVPAGFTDEGLPVGLQIVGRHRDEWGVLQLAHAFEQATGFYRRRPPL 522          
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Match: A0A2V6W577_9BACT (Amidase n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6W577_9BACT)

HSP 1 Score: 266 bits (680), Expect = 9.300e-84
Identity = 130/240 (54.17%), Postives = 161/240 (67.08%), Query Frame = 1
Query:    1 SVMAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAVLERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRAHLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPSTQVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTASGLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL 720
            S +AGPD R PIA+ E G  FR PLARD RG+R+AW+ +LG   +D  V A LE    VF  LGC +D+  PD+RDA E+F+ LRA+ FA R+GP     R  +KDTV+WN EQGL LT +++  AE+KR+ L  RV  F   ++FLL P+TQVPPF + Q +V  I G  L TY+DWM  C  ITVTG PAI+VP GFT  GLPVGLQIVG    D  VL+LAH FE AT  G RRP++
Sbjct:  229 SAIAGPDARSPIAIAEPGDGFRRPLARDFRGVRVAWSRDLGGLPIDRRVTAALEPQRKVFENLGCAVDDTQPDMRDAREIFQALRAFAFATRYGPMLAEHRHQIKDTVIWNTEQGLKLTARELADAEVKRTALYHRVREFMERYEFLLLPTTQVPPFDVAQPYVTEIEGAALPTYIDWMRSCSDITVTGLPAIAVPGGFTPDGLPVGLQIVGRHQNDWGVLELAHAFEQATGVGLRRPAV 468          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17350.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DH20_9GAMM5.790e-9760.42Amidase n=1 Tax=Gammaproteobacteria bacterium TaxI... [more]
W4L9C8_9BACT8.370e-9155.83Amidase domain-containing protein (Fragment) n=3 T... [more]
A0A2V9J156_9BACT9.170e-9055.42Amidase n=3 Tax=Acidobacteria bacterium TaxID=1978... [more]
A0A6J4XB95_9DELT3.540e-8754.58Amidase family protein BBta_1912 n=1 Tax=Olavius s... [more]
A0A076MPT3_AMYME3.010e-8554.36Amidase n=9 Tax=Pseudonocardiaceae TaxID=2070 RepI... [more]
A0A2D5Z4A7_9BACT4.370e-8554.58Amidase n=1 Tax=Phycisphaeraceae bacterium TaxID=2... [more]
A0A7Y4X3I6_9DELT1.740e-8454.58Amidase n=1 Tax=Deltaproteobacteria bacterium TaxI... [more]
A0A540VCA4_9CHLR7.140e-8453.94Amidase n=2 Tax=Litorilinea aerophila TaxID=120438... [more]
A0A2V7C8K8_9BACT7.160e-8455.42Amidase n=1 Tax=Candidatus Rokubacteria bacterium ... [more]
A0A2V6W577_9BACT9.300e-8454.17Amidase n=2 Tax=Candidatus Rokubacteria bacterium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17350contigP-wetherbeei_contig17350:714..1436 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1068978.AMETH_2562
PFAMsAmidase
Model size723
Max annot lvl201174|Actinobacteria
KEGG rclassRC00010,RC00090,RC00100,RC00141,RC00811,RC00950,RC01025
KEGG koko:K01426,ko:K19795
KEGG ReactionR02540,R03096,R03180,R03909,R05551,R05590,R07629,R10778
KEGG Pathwayko00240,ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00240,map00330,map00360,map00380,map00627,map00643,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.15e-85
EggNOG OGsCOG0154@1|root,COG0154@2|Bacteria,2GKPZ@201174|Actinobacteria,4DXAY@85010|Pseudonocardiales
EC3.5.1.4,3.5.1.95
DescriptionBelongs to the amidase family
Cds size717
COG categoryJ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186114.9428-CDS-P-wetherbeei_contig17350:713..14301683186114.9428-CDS-P-wetherbeei_contig17350:713..1430Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17350 714..1430 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186114.9567122-UTR-P-wetherbeei_contig17350:1430..14361683186114.9567122-UTR-P-wetherbeei_contig17350:1430..1436Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig17350 1431..1436 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17350.1.1prot_P-wetherbeei_contig17350.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17350 714..1430 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17350.1.1

>prot_P-wetherbeei_contig17350.1.1 ID=prot_P-wetherbeei_contig17350.1.1|Name=mRNA_P-wetherbeei_contig17350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp
MAGPDPRVPIALGEAGASFRVPLARDLRGLRLAWTPNLGQFEVDAEVLAV
LERALPVFSELGCKLDNASPDLRDADEVFRVLRAWQFAARFGPDFEHQRA
HLKDTVVWNIEQGLALTLKDVTQAEIKRSRLVARVAAFFAHHDFLLCPST
QVPPFPIEQEWVQNINGRELATYLDWMGVCYAITVTGCPAISVPAGFTAS
GLPVGLQIVGPRWQDLAVLQLAHGFEAATRHGDRRPSL*
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mRNA from alignment at P-wetherbeei_contig17350:714..1436-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17350.1.1 ID=mRNA_P-wetherbeei_contig17350.1.1|Name=mRNA_P-wetherbeei_contig17350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig17350:714..1436- (Phaeothamnion wetherbeei SAG_119_79)
TCGGTCATGGCCGGTCCCGATCCGCGTGTGCCTATCGCTCTTGGCGAAGC AGGCGCGAGTTTTCGCGTTCCACTGGCGCGAGATTTGCGAGGTCTGCGCC TGGCGTGGACACCGAACCTCGGCCAGTTCGAAGTCGATGCCGAAGTGCTC GCAGTGCTCGAACGGGCCTTACCGGTATTCAGCGAGCTCGGCTGCAAACT CGATAACGCGAGCCCTGATCTGCGTGATGCCGATGAAGTGTTCCGTGTGT TACGCGCCTGGCAATTTGCCGCGCGTTTCGGGCCGGACTTCGAACACCAG CGCGCGCATCTGAAAGACACCGTGGTGTGGAATATCGAGCAGGGTCTGGC CTTGACGCTCAAGGATGTGACGCAAGCCGAAATCAAGCGCAGCCGGTTGG TGGCGCGGGTCGCAGCGTTCTTTGCACACCATGATTTCCTGTTATGTCCC AGCACCCAGGTGCCGCCTTTCCCCATCGAGCAGGAATGGGTGCAGAACAT CAATGGTCGCGAGCTCGCGACGTATCTCGATTGGATGGGGGTGTGCTACG CGATCACGGTGACCGGCTGCCCGGCAATCTCGGTGCCGGCGGGATTTACC GCCAGCGGTTTGCCGGTAGGCTTACAGATAGTCGGGCCACGCTGGCAGGA TCTGGCGGTGCTGCAACTCGCCCACGGCTTTGAAGCCGCGACCCGCCACG GCGACCGGCGGCCGTCTTTGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17350:714..1436-

>mRNA_P-wetherbeei_contig17350.1.1 ID=mRNA_P-wetherbeei_contig17350.1.1|Name=mRNA_P-wetherbeei_contig17350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig17350:714..1436- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGGTCCCGATCCGCGTGTGCCTATCGCTCTTGGCGAAGCAGGCGC
GAGTTTTCGCGTTCCACTGGCGCGAGATTTGCGAGGTCTGCGCCTGGCGT
GGACACCGAACCTCGGCCAGTTCGAAGTCGATGCCGAAGTGCTCGCAGTG
CTCGAACGGGCCTTACCGGTATTCAGCGAGCTCGGCTGCAAACTCGATAA
CGCGAGCCCTGATCTGCGTGATGCCGATGAAGTGTTCCGTGTGTTACGCG
CCTGGCAATTTGCCGCGCGTTTCGGGCCGGACTTCGAACACCAGCGCGCG
CATCTGAAAGACACCGTGGTGTGGAATATCGAGCAGGGTCTGGCCTTGAC
GCTCAAGGATGTGACGCAAGCCGAAATCAAGCGCAGCCGGTTGGTGGCGC
GGGTCGCAGCGTTCTTTGCACACCATGATTTCCTGTTATGTCCCAGCACC
CAGGTGCCGCCTTTCCCCATCGAGCAGGAATGGGTGCAGAACATCAATGG
TCGCGAGCTCGCGACGTATCTCGATTGGATGGGGGTGTGCTACGCGATCA
CGGTGACCGGCTGCCCGGCAATCTCGGTGCCGGCGGGATTTACCGCCAGC
GGTTTGCCGGTAGGCTTACAGATAGTCGGGCCACGCTGGCAGGATCTGGC
GGTGCTGCAACTCGCCCACGGCTTTGAAGCCGCGACCCGCCACGGCGACC
GGCGGCCGTCTTTGTAG
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