mRNA_P-wetherbeei_contig17340.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: A0A1Q3KPY8_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q3KPY8_9PROT) HSP 1 Score: 444 bits (1141), Expect = 7.370e-156 Identity = 219/252 (86.90%), Postives = 226/252 (89.68%), Query Frame = 1
Query: 28 LLFLSPAFFAVNMLMARYATFVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGAYGAFAFCIRELGPSVTSVSMYLGPLYVG 783
+L LSPA FAVNMLMARYATFVPPNALALGRWL VALLLLPFVWPRLVR RHAL+REWPDLL+LGALGMW+CGAWVYIGGRT PALNIGLIYAASPILVVALGRLLY ERLTAGR+AGI LCLAGVAAVFAKGR NLLSV FTEGDLWIAAASACWG YSVLLK RPSALDPLTRLCAI+ AGSLVLLPFA+GEA LW GPDF DWRT PGVGAYGAFAFCIRELGPSVTSVSMYLGPLYVG
Sbjct: 1 MLLLSPAMFAVNMLMARYATFVPPNALALGRWLGVALLLLPFVWPRLVRDRHALSREWPDLLLLGALGMWICGAWVYIGGRTAPALNIGLIYAASPILVVALGRLLYRERLTAGRLAGIALCLAGVAAVFAKGRIGNLLSVEFTEGDLWIAAASACWGVYSVLLKHRPSALDPLTRLCAIAFAGSLVLLPFAVGEAVLWHGPDFTDWRTWVSWLVLALIPGVGAYGAFAFCIRELGPSVTSVSMYLGPLYVG 252
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: UPI001E2F407C (DMT family transporter n=2 Tax=Reyranella TaxID=445219 RepID=UPI001E2F407C) HSP 1 Score: 443 bits (1140), Expect = 1.550e-155 Identity = 216/260 (83.08%), Postives = 228/260 (87.69%), Query Frame = 1
Query: 4 SRRRLAWVLLFLSPAFFAVNMLMARYATFVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGAYGAFAFCIRELGPSVTSVSMYLGPLYVG 783
+RRR+AW LL L+PA F+VNML ARYATFVPPNALALGRW VALLLLPFVWPRLVR RHAL REWPDLL+LGALGMW+CGAWVYIG R+ PALNIGLIYAASPILVVALGRLLY ERLT GRIAGIVLCLAGVAAVFAKGR +NLLSVRFTEGDLWIAAASACWG YSVLLK RPSALDPLTRLCAIS AG++VLLPF IGEA WQ PD ADWRT PGVGAYGAF +C+RELGPSVTSVSMYLGPLYVG
Sbjct: 5 TRRRIAWTLLLLTPAMFSVNMLGARYATFVPPNALALGRWFFVALLLLPFVWPRLVRHRHALVREWPDLLLLGALGMWICGAWVYIGARSVPALNIGLIYAASPILVVALGRLLYRERLTPGRIAGIVLCLAGVAAVFAKGRIENLLSVRFTEGDLWIAAASACWGLYSVLLKARPSALDPLTRLCAISFAGAIVLLPFTIGEALFWQAPDLADWRTWAAFLVLAIIPGVGAYGAFGYCVRELGPSVTSVSMYLGPLYVG 264
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: A0A521L3F2_9HYPH (DMT family transporter n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L3F2_9HYPH) HSP 1 Score: 427 bits (1099), Expect = 2.810e-149 Identity = 222/261 (85.06%), Postives = 231/261 (88.51%), Query Frame = 1
Query: 1 MSRRRLAWVLLFLSPAFFAVNMLMARYATFVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGAYGAFAFCIRELGPSVTSVSMYLGPLYVG 783
++RRR+AW LL LSPA F+VNMLMARYATFVPPNALALGRW LVA LLLPFVW RLVR RHALAREWPDLLMLGALGMW+CGAWVYIGGRTTPALNIGLIYAASPILVV LGRLLY E+LT RIAGI LCLAGVAAVFAKGR NLLSV FTEGDLWIAAASACWG YSVLLK RPSALDPLTRLCAIS AGSLVLLPFAIGEAALW GPDF DW+TXXXXXXXXXX +C+RELGPSVTSVSMYLGPLYVG
Sbjct: 4 LNRRRIAWALLLLSPAMFSVNMLMARYATFVPPNALALGRWFLVAALLLPFVWSRLVRHRHALAREWPDLLMLGALGMWICGAWVYIGGRTTPALNIGLIYAASPILVVLLGRLLYREKLTTARIAGIALCLAGVAAVFAKGRVGNLLSVHFTEGDLWIAAASACWGLYSVLLKHRPSALDPLTRLCAISFAGSLVLLPFAIGEAALWAGPDFGDWKTXXXXXXXXXXXXXXXXXXXGYCVRELGPSVTSVSMYLGPLYVG 264
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: A0A259MDR9_9PROT (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MDR9_9PROT) HSP 1 Score: 417 bits (1073), Expect = 1.300e-145 Identity = 203/244 (83.20%), Postives = 214/244 (87.70%), Query Frame = 1
Query: 52 FAVNMLMARYATFVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGAYGAFAFCIRELGPSVTSVSMYLGPLYVG 783
FAVNMLMARYATFVPPNALALGRW VA+LLLPF WPRLVR R AL+REW DLL+LGA+GMW+CGAWVYIG R+ PALNIGLIYAASPILVVALGRLLY ERLT GRIAGIVLCLAGVAAVFAKGR +NLLSV+FTEGDLWIAAASACWG YSVLLK RPSALDPLTRLCAIS AG LVLLPF +GEA WQ PD ADWRT PGVGAYGAFA+C+RELGPSVTSVSMYLGPLYVG
Sbjct: 2 FAVNMLMARYATFVPPNALALGRWFFVAMLLLPFAWPRLVRHRAALSREWRDLLLLGAIGMWICGAWVYIGARSVPALNIGLIYAASPILVVALGRLLYRERLTMGRIAGIVLCLAGVAAVFAKGRLENLLSVQFTEGDLWIAAASACWGLYSVLLKARPSALDPLTRLCAISFAGCLVLLPFTVGEALFWQAPDLADWRTWASFLVLAVIPGVGAYGAFAYCVRELGPSVTSVSMYLGPLYVG 245
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: A0A1F2ZTC7_9PROT (EamA domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F2ZTC7_9PROT) HSP 1 Score: 397 bits (1020), Expect = 2.960e-138 Identity = 197/233 (84.55%), Postives = 205/233 (87.98%), Query Frame = 1
Query: 1 MSRRRLAWVLLFLSPAFFAVNMLMARYATFVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGA 699
+SRRRLAW LL LSPA F VNMLMARYATFVPPNALALGRW LVA+LLLPF WPRLVR RHAL REWPDL+MLGA+GMW+CGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLY E+LTA R+AGI LCLAGVAAVFA+GRFDNLLSVRFTEGDLWIAAASA G YSVLLK RPSALDPLTRLCAIS AGSLVLLPFAIGEA LWQGPDF DWRT PGVGA
Sbjct: 4 LSRRRLAWALLLLSPAMFGVNMLMARYATFVPPNALALGRWFLVAVLLLPFAWPRLVRHRHALTREWPDLVMLGAIGMWICGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYREKLTAARLAGIALCLAGVAAVFARGRFDNLLSVRFTEGDLWIAAASASCGLYSVLLKLRPSALDPLTRLCAISFAGSLVLLPFAIGEAMLWQGPDFTDWRTWASWLVLAVIPGVGA 236
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: A0A5C5SJV4_9HYPH (DMT family transporter n=2 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5SJV4_9HYPH) HSP 1 Score: 285 bits (729), Expect = 3.930e-93 Identity = 154/259 (59.46%), Postives = 175/259 (67.57%), Query Frame = 1
Query: 7 RRRLAWVLLFLSPAFFAVNMLMARYATFVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGAYGAFAFCIRELGPSVTSVSMYLGPLYVG 783
R +AW L PA FAVN L ARY FVPP+ALALGRW L+LLPFV RL + R AL REW DLL+LGALGMWVCGA+VYIGGRTT A NIGLIYAASP++VV + L+Y ERL ++AGI LCL GV V KG LLSVRF GD+WIA ASA WG YSVLLK RPS LDP TRL AI G +VL+P EAAL QG D R+ PGVGAYGA++F + LG ++ MYLGPLY G
Sbjct: 2 RLPVAWTALLACPALFAVNQLAARYVDFVPPHALALGRWACALLILLPFVGSRLWQHRTALRREWVDLLVLGALGMWVCGAFVYIGGRTTSATNIGLIYAASPVVVVGVAALVYGERLWPRQLAGIALCLLGVLWVIIKGDPARLLSVRFAVGDVWIAVASAAWGLYSVLLKYRPSTLDPTTRLAAIIAGGVVVLIPTTALEAAL-QGAPGLDGRSLLTILVLAVVPGVGAYGAYSFALGVLGAGRAAIGMYLGPLYTG 259
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: A0A5C8PCV1_9HYPH (DMT family transporter n=2 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PCV1_9HYPH) HSP 1 Score: 273 bits (699), Expect = 1.030e-88 Identity = 148/249 (59.44%), Postives = 170/249 (68.27%), Query Frame = 1
Query: 37 LSPAFFAVNMLMARYATFVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGAYGAFAFCIRELGPSVTSVSMYLGPLYVG 783
L PA FAVN L ARY +VPP ALALGRWL +LLL FV RL R+R A+ REW DLL+LGALGMWVCGA+VYIGGRTT A NIGLIYAASP++VV + L Y ERL ++AGI LCL GV V KG LL+V FT GDLWIA ASA WG YSVLL+ RPS LDP TRL AI G VLLP A EAA P D R+ PGVGAYGA+++ + LG + T++ MYLGP+Y G
Sbjct: 3 LCPALFAVNQLGARYVDYVPPYALALGRWLCALVLLLLFVGGRLWRQRAAVRREWRDLLVLGALGMWVCGAFVYIGGRTTTATNIGLIYAASPVVVVGVAALAYGERLWPRQLAGIALCLLGVLWVIIKGDPTRLLTVSFTAGDLWIAVASASWGLYSVLLRHRPSGLDPTTRLAAIMAGGVAVLLPTAAIEAAFVGAPPL-DARSLATVLVLAVVPGVGAYGAYSYALAVLGAARTAIGMYLGPIYTG 250
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: UPI000B4A9232 (DMT family transporter n=1 Tax=Ideonella sp. A 288 TaxID=1962181 RepID=UPI000B4A9232) HSP 1 Score: 238 bits (606), Expect = 2.300e-74 Identity = 126/256 (49.22%), Postives = 164/256 (64.06%), Query Frame = 1
Query: 13 RLAWVLLFLSPAFFAVNMLMARYAT-FVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGAYGAFAFCIRELGPSVTSVSMYLGPLY 777
R A +L+F++PA ++VN L AR+A + P+ALALGRW + AL+L F LV +R +A EW LL+LGALGMWVCGA+VYIGGR+T A+NIGL+Y+ SP+LV L HERL ++ G+ L LAGVA + KG + L +R GD WIA A ACW YS+LL+ PSA PL RL ++ AG +VLLPF + EA W P W++ PG GAYGAF+ R LG + S+ +YLGPLY
Sbjct: 18 RTAQMLIFITPALWSVNYLAARWAPGVIAPHALALGRWAVAALVLALFCRHELVAKRRHIAAEWKQLLVLGALGMWVCGAFVYIGGRSTTAINIGLLYSVSPVLVALASALWLHERLGPRQLVGVALALAGVAHILVKGEWAALGQLRINPGDAWIAIAVACWTAYSLLLRAWPSAFGPLARLTLVAAAGVVVLLPFTLWEALAWL-PTELSWKSAGLVLATALLPGAGAYGAFSMMQRALGAARVSMVLYLGPLY 272
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: A0A7V7WTQ0_9BURK (DMT family transporter n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7V7WTQ0_9BURK) HSP 1 Score: 237 bits (604), Expect = 3.600e-74 Identity = 126/257 (49.03%), Postives = 166/257 (64.59%), Query Frame = 1
Query: 10 RRLAWVLLFLSPAFFAVNMLMARYAT-FVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGAYGAFAFCIRELGPSVTSVSMYLGPLY 777
RRLA VLLF++PA +AVN L+AR+A + P+ALALGRW + AL+L F L +R A+ EW LL+LGALGMWVCGA+VYIG R+T A+NIGL+YAA+P+L+ L HER+ G+ G+ L LAGV + +G + LL +RF GD+W+AAA W YS+LL+ PS PL RL I++AG +VLLPF + EA W P WR+ PG GAY A++ RELG + + +YLGPLY
Sbjct: 9 RRLAHVLLFVTPALWAVNYLVARWAPGVIAPHALALGRWSVAALVLGAFCTAELRDKRAAIRTEWKQLLVLGALGMWVCGAFVYIGARSTSAINIGLLYAAAPVLIALASALWLHERMGLGQRLGVALALAGVLHILLRGDWAALLHLRFNGGDIWVAAAVLSWTVYSLLLRAWPSRFGPLARLTLIAVAGIVVLLPFTVWEALAWW-PTELSWRSLALVVAAALLPGAGAYAAYSIMQRELGAARVGMVLYLGPLY 264
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Match: A0A0S8BBL7_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BBL7_9PROT) HSP 1 Score: 234 bits (597), Expect = 4.230e-73 Identity = 123/256 (48.05%), Postives = 162/256 (63.28%), Query Frame = 1
Query: 13 RLAWVLLFLSPAFFAVNMLMARYAT-FVPPNALALGRWLLVALLLLPFVWPRLVRRRHALAREWPDLLMLGALGMWVCGAWVYIGGRTTPALNIGLIYAASPILVVALGRLLYHERLTAGRIAGIVLCLAGVAAVFAKGRFDNLLSVRFTEGDLWIAAASACWGFYSVLLKQRPSALDPLTRLCAISIAGSLVLLPFAIGEAALWQGPDFADWRTXXXXXXXXXXPGVGAYGAFAFCIRELGPSVTSVSMYLGPLY 777
RLA+ LL L+P ++ NM++AR+A + PP+ALA RW + L +L L RRR L REW DLL+LGALGMWVCGA+VYI G TT A NIGLIYA PILV+ L ++HE L+ ++ G ++ L GV A+ KG +LL + FT GDLW A+ CW Y+VLL+ RP+ LDP RL AI+ AG LVL PF + E+ L P +WR PG GAY A+++ +RELG + + +YL PLY
Sbjct: 8 RLAYALLLLAPGLWSANMIVARWAAGWFPPHALAFWRWTIALLPMLALCGAVLWRRRAELRREWRDLLLLGALGMWVCGAFVYIAGETTSATNIGLIYAGVPILVMLLSARVFHEPLSGAQLTGAIIALTGVLAIVLKGDPGSLLRLAFTRGDLWALTAAGCWAVYTVLLRHRPTTLDPFLRLTAITAAGILVLAPFTLAESQLVGVPPL-EWRALFAAVVVGLLPGFGAYQAYSWLVRELGAARAGLVLYLTPLY 262 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17340.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17340.2.1 >prot_P-wetherbeei_contig17340.2.1 ID=prot_P-wetherbeei_contig17340.2.1|Name=mRNA_P-wetherbeei_contig17340.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp MSRRRLAWVLLFLSPAFFAVNMLMARYATFVPPNALALGRWLLVALLLLPback to top mRNA from alignment at P-wetherbeei_contig17340:655..1437+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17340.2.1 ID=mRNA_P-wetherbeei_contig17340.2.1|Name=mRNA_P-wetherbeei_contig17340.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig17340:655..1437+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17340:655..1437+ >mRNA_P-wetherbeei_contig17340.2.1 ID=mRNA_P-wetherbeei_contig17340.2.1|Name=mRNA_P-wetherbeei_contig17340.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig17340:655..1437+ (Phaeothamnion wetherbeei SAG_119_79)back to top |