mRNA_P-wetherbeei_contig17334.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A537SW91_9PROT (SDR family oxidoreductase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SW91_9PROT) HSP 1 Score: 400 bits (1028), Expect = 5.590e-138 Identity = 201/263 (76.43%), Postives = 223/263 (84.79%), Query Frame = 1
Query: 1 CGREEKTMPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
C MPKTPDYF GKTI+ITGAASGIGRA A IFAREGANVVCAD N +G +ETAA + G + LALT DVTSR+QV+DM+ RA++ FG VQF FNSAGAA+RR+KFL+IDDAL E TF LN KGTLY MQAVLPHML N+ GVIVN+ SMAHRRGGPGSS+HYAAAKGAVV+MT+GVAREFA GIR LSISPGP+RTPFQ AA TSPEL Q+FL+DVPM+RFGEPEEI ELVLFMCSDAC FMTADTVY NGGGGWR
Sbjct: 68 CSSRSHAMPKTPDYFVGKTIIITGAASGIGRAAAKIFAREGANVVCADINGEGAKETAAEIVAHGGKTLALTSDVTSRRQVNDMVHRAIETFGQVQFQFNSAGAALRRSKFLDIDDALFENTFALNVKGTLYCMQAVLPHMLENRHGVIVNMASMAHRRGGPGSSVHYAAAKGAVVSMTLGVAREFAQAGIRCLSISPGPIRTPFQSAAQTSPELMQRFLEDVPMQRFGEPEEIAELVLFMCSDACPFMTADTVYANGGGGWR 330
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A537PEI4_9PROT (SDR family oxidoreductase n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PEI4_9PROT) HSP 1 Score: 399 bits (1025), Expect = 7.680e-138 Identity = 202/257 (78.60%), Postives = 223/257 (86.77%), Query Frame = 1
Query: 19 TMPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
+MPKTPDYF GKTI+ITGAASGIGRA +LIFAREG NVVCAD N DG +ETA V +G +ALAL DVTSR+QV+DM+ RA++ FGSVQF FNSAGAA+RR+ FL+IDDAL E TF LN KGTLY MQAVLPHML N GVIVN+ SMAHRRGGPGSS+HYAAAKGAVV+MT+GVAREFA GIR LSISPGP+RTPFQ AA T PEL Q+FLDDVPMKRFGEPEEIGEL+LFMCSDAC FMTADTVYVNGGGGWR
Sbjct: 53 SMPKTPDYFVGKTIIITGAASGIGRAASLIFAREGTNVVCADINIDGAKETAKQVVAQGGKALALATDVTSRRQVNDMVHRAIETFGSVQFQFNSAGAALRRSTFLDIDDALFESTFALNVKGTLYCMQAVLPHMLENGQGVIVNMASMAHRRGGPGSSVHYAAAKGAVVSMTLGVAREFAQAGIRCLSISPGPIRTPFQSAAQTPPELIQRFLDDVPMKRFGEPEEIGELLLFMCSDACHFMTADTVYVNGGGGWR 309
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A537V580_9PROT (SDR family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537V580_9PROT) HSP 1 Score: 392 bits (1008), Expect = 4.570e-136 Identity = 198/256 (77.34%), Postives = 220/256 (85.94%), Query Frame = 1
Query: 22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
M KTP+YF GKTI+ITGAASGIGRA ALIFAREGANVVC D N DG ++TA V +G +AL L DVTSRK V++MI+RA+D FG+VQF FNSAGAA+RR+KFL+IDDAL + TF LN KGT + MQA+LPHML N GVIVN+ SMAHRRGGPGSS+HYAAAKGAVV+MT+GVAREFA GIR LSISPGPVRTPFQ AA TSPEL Q+FLDDVPMKRFGEPEEI ELVLFMCSDAC FMTADTVYVNGGGGWR
Sbjct: 1 MSKTPEYFVGKTIIITGAASGIGRAAALIFAREGANVVCVDINADGTQQTAERVIAQGGKALVLRTDVTSRKDVNEMIRRAIDTFGNVQFQFNSAGAALRRSKFLDIDDALFDDTFSLNVKGTFHCMQAILPHMLENGHGVIVNMASMAHRRGGPGSSVHYAAAKGAVVSMTLGVAREFAQAGIRCLSISPGPVRTPFQSAAQTSPELMQRFLDDVPMKRFGEPEEIAELVLFMCSDACAFMTADTVYVNGGGGWR 256
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A0Q7TT49_9HYPH (Uncharacterized protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TT49_9HYPH) HSP 1 Score: 372 bits (955), Expect = 5.530e-128 Identity = 197/258 (76.36%), Postives = 221/258 (85.66%), Query Frame = 1
Query: 22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNG--KGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
MPK+PDYF GKTIVITGA SGIGRATALIFAREGANVVCAD +E V +T +++ KG ++LAL +DVT R V++MI+ AV FGSVQFLFNSAG+A+RRAKFL+IDD L + TFDLN KGT Y MQAVLPHMLAN+FGVIVNVGSMAHRRGG GSS+HYA+AKGAVVTMTMGVAREFA QGIRALSISPGP+ T FQ A+ TSPEL + L DVPMKRFG PEEIGELVLFMCSDAC +MTADTVYVNGGGG+R
Sbjct: 1 MPKSPDYFKGKTIVITGAGSGIGRATALIFAREGANVVCADIDEAAVAQTVEMIDAAYKG-KSLALGIDVTERAAVNNMIELAVGDFGSVQFLFNSAGSAMRRAKFLDIDDDLFDATFDLNVKGTFYAMQAVLPHMLANRFGVIVNVGSMAHRRGGGGSSVHYASAKGAVVTMTMGVAREFATQGIRALSISPGPLDTNFQIASQTSPELKAQMLADVPMKRFGRPEEIGELVLFMCSDACEYMTADTVYVNGGGGFR 257
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: UPI00165CC341 (SDR family oxidoreductase n=1 Tax=Siccirubricoccus phaeus TaxID=2595053 RepID=UPI00165CC341) HSP 1 Score: 372 bits (954), Expect = 7.570e-128 Identity = 188/256 (73.44%), Postives = 216/256 (84.38%), Query Frame = 1
Query: 22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
MPKTPDYF GKTI+ITGAASGIGRATALIFAREGANVV AD + G + A + +GS+AL + DVTSR QV+++++RA+ FG V FLFNSAG+A RR KFLEIDD L+E+TFDLN KGT + MQAVLPHML N GVIVNV SM+H+RGGPG+S+HYAAAKGAV+TMT+GVAREFA +GIR LSISPGPV TPF AA T PEL +KF++DVPMKR EPEEIGELVLFMCSDACG+MTADTVYVNGGGGWR
Sbjct: 1 MPKTPDYFHGKTIIITGAASGIGRATALIFAREGANVVVADVDAAGSQAVADALRQRGSKALPVATDVTSRPQVEELVRRAIAEFGRVDFLFNSAGSAFRRCKFLEIDDQLLERTFDLNVKGTFHAMQAVLPHMLENGQGVIVNVASMSHKRGGPGASVHYAAAKGAVLTMTLGVAREFADRGIRCLSISPGPVNTPFAMAADTPPELVRKFVEDVPMKRMAEPEEIGELVLFMCSDACGYMTADTVYVNGGGGWR 256
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A8J2ZEY4_9PROT (Short chain dehydrogenase n=1 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZEY4_9PROT) HSP 1 Score: 368 bits (944), Expect = 2.520e-126 Identity = 186/256 (72.66%), Postives = 216/256 (84.38%), Query Frame = 1
Query: 22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
MP+TPDYF G+TIVITGAASGIGRATALIFAREGANVVCAD + +G R TA V G++ L + DVTSR QV+ +I+RA++ FG V FLFNSAGAA RR FLEIDD L+E+TFDLN KGT Y MQAVLPHML N GVIVN+ SM+H+RGGPG+S+HYA+AKGAV+TMT+GVAREFA +GIRA+SISPGPV TPF AA T PEL ++F++DVPMKR EPEEIGELVLF+CSDAC +MTADTVYVNGGGGWR
Sbjct: 1 MPRTPDYFHGRTIVITGAASGIGRATALIFAREGANVVCADVDAEGARRTAEGVAQLGAKGLGVATDVTSRAQVNALIRRAIEEFGRVDFLFNSAGAAGRRCGFLEIDDELLERTFDLNVKGTFYAMQAVLPHMLENGAGVIVNMASMSHKRGGPGASVHYASAKGAVLTMTLGVAREFADRGIRAISISPGPVNTPFARAANTPPELIRRFVEDVPMKRMAEPEEIGELVLFLCSDACPYMTADTVYVNGGGGWR 256
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A537NNF6_9PROT (SDR family oxidoreductase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NNF6_9PROT) HSP 1 Score: 360 bits (925), Expect = 1.430e-123 Identity = 181/247 (73.28%), Postives = 213/247 (86.23%), Query Frame = 1
Query: 22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTV 762
M KTPDYF GKTI++TGAASGIG+ATALIFAREGA+VVCAD DG +E A + G +AL L +DVTSR+QVD+M+++++ AFGSVQF FNSAGAA+RR+KFL+IDDAL +KTF LN KGT Y MQA+LPHM N GVIVN+ SMAHRRGGPGSS+HYAAAKGAVV++TMGVAREFA GIR +SISPGP+RTPFQ +A TSPEL Q+FL+DVPMKRFGEP+EIGELVLF+CSDAC FMTA+TV
Sbjct: 1 MAKTPDYFVGKTIIVTGAASGIGKATALIFAREGASVVCADLIGDGAQEIAKEIRHHGGKALGLAIDVTSREQVDEMVEQSIAAFGSVQFQFNSAGAALRRSKFLDIDDALFDKTFSLNVKGTFYCMQAILPHMQRNGAGVIVNMASMAHRRGGPGSSVHYAAAKGAVVSLTMGVAREFAHTGIRCVSISPGPIRTPFQASAQTSPELMQRFLEDVPMKRFGEPDEIGELVLFICSDACPFMTAETV 247
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A2E7UYV9_9RICK (Short-chain dehydrogenase n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7UYV9_9RICK) HSP 1 Score: 359 bits (921), Expect = 7.960e-123 Identity = 186/256 (72.66%), Postives = 213/256 (83.20%), Query Frame = 1
Query: 22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
MPKTP++F KTIVITGAASGIGR+TA IFAREGANVVC D + +G TA + KG +AL L DVT R+QVD MI+RA++ FGSV+F FNSAGAA RR+ FL+ID+ L ++TFDLN K + MQAVLPHML N GVIVNV SM+H+RG PGSSIHYAAAKGAVVTMT+GVAREFA +GIR LSISPGPVRT FQ+AA TSPEL ++F +DVPMKRF EPEEIGELVLFMCSDAC +MTADTVYVNGGGGWR
Sbjct: 1 MPKTPEFFVEKTIVITGAASGIGRSTAQIFAREGANVVCGDIDAEGAGRTANQIIQKGGRALGLACDVTKREQVDVMIQRAIEEFGSVEFQFNSAGAAGRRSTFLDIDNDLWDQTFDLNAKSVYHSMQAVLPHMLENGGGVIVNVASMSHKRGAPGSSIHYAAAKGAVVTMTLGVAREFADRGIRCLSISPGPVRTAFQEAAKTSPELMERFKNDVPMKRFAEPEEIGELVLFMCSDACEYMTADTVYVNGGGGWR 256
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: UPI001AE0411F (SDR family oxidoreductase n=1 Tax=Roseomonas sp. SG15 TaxID=2820811 RepID=UPI001AE0411F) HSP 1 Score: 356 bits (913), Expect = 1.310e-121 Identity = 179/256 (69.92%), Postives = 212/256 (82.81%), Query Frame = 1
Query: 22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
MPK PD+F +TI+ITGAASGIGRATALIFAREGA V+ AD + +G + T V +G +A L+ DV SR+QV+ ++ + G V FLFN AG+A++R KFLEIDDAL++KTFDLNFKGT Y MQAVLPHML N GVIVNV SM+H+RGGPG+S+HYAAAKGAV+TMT+GVAREFA +GIRALSISPGPV TPF AA+TSP+L +KF++DVPMKR EPEEIGELVLFMCSDAC FMTADTVYV+GGGGWR
Sbjct: 1 MPKDPDFFRDRTIIITGAASGIGRATALIFAREGAKVMVADVDTEGGQTTVEAVISRGGRASFLSTDVCSRQQVEALVAETITQLGKVDFLFNCAGSALKRCKFLEIDDALMDKTFDLNFKGTFYAMQAVLPHMLENGKGVIVNVASMSHKRGGPGASVHYAAAKGAVLTMTLGVAREFADRGIRALSISPGPVNTPFATAASTSPDLVRKFVEDVPMKRMAEPEEIGELVLFMCSDACEFMTADTVYVSGGGGWR 256
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Match: A0A2E5PGM9_9PROT (Short-chain dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PGM9_9PROT) HSP 1 Score: 355 bits (911), Expect = 2.640e-121 Identity = 177/256 (69.14%), Postives = 209/256 (81.64%), Query Frame = 1
Query: 22 MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETAALVNGKGSQALALTVDVTSRKQVDDMIKRAVDAFGSVQFLFNSAGAAIRRAKFLEIDDALIEKTFDLNFKGTLYGMQAVLPHMLANKFGVIVNVGSMAHRRGGPGSSIHYAAAKGAVVTMTMGVAREFAAQGIRALSISPGPVRTPFQDAAATSPELAQKFLDDVPMKRFGEPEEIGELVLFMCSDACGFMTADTVYVNGGGGWR 789
MPKTPDYF KTIVITGA SGIGRATAL+FAREGANV+CAD N D +ET VN G+QALA + DV +R V++M+ A A+G + FLFNSAG+A+RR+ F+EIDD L ++T+D+N G YGMQA LPHML GVIVN+ SM+H+RGGPG+SIHYA+AKGAV TMT+GVAREFA+QGIR +SISPGPV T FQ +AATS L ++F +DVPMKRFG+PEEI ELVLFMCSDAC FMTADTVYVNGGGGWR
Sbjct: 1 MPKTPDYFQNKTIVITGAGSGIGRATALVFAREGANVLCADINGDAAQETVTQVNDSGAQALATSTDVRNRTAVEEMVDAAKSAYGGIDFLFNSAGSAVRRSTFMEIDDDLWKETYDINVNGVFYGMQAALPHMLETGKGVIVNMASMSHKRGGPGTSIHYASAKGAVFTMTLGVAREFASQGIRCMSISPGPVETAFQRSAATSEALMEQFRNDVPMKRFGQPEEIAELVLFMCSDACEFMTADTVYVNGGGGWR 256 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17334.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17334.1.1 >prot_P-wetherbeei_contig17334.1.1 ID=prot_P-wetherbeei_contig17334.1.1|Name=mRNA_P-wetherbeei_contig17334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp MPKTPDYFAGKTIVITGAASGIGRATALIFAREGANVVCADRNEDGVRETback to top mRNA from alignment at P-wetherbeei_contig17334:550..1341+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17334.1.1 ID=mRNA_P-wetherbeei_contig17334.1.1|Name=mRNA_P-wetherbeei_contig17334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig17334:550..1341+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17334:550..1341+ >mRNA_P-wetherbeei_contig17334.1.1 ID=mRNA_P-wetherbeei_contig17334.1.1|Name=mRNA_P-wetherbeei_contig17334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig17334:550..1341+ (Phaeothamnion wetherbeei SAG_119_79)back to top |