mRNA_P-wetherbeei_contig17305.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17305.1.1
Unique NamemRNA_P-wetherbeei_contig17305.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: A0A2E2JBD4_9GAMM (Cytochrome c domain-containing protein n=1 Tax=Polycyclovorans sp. TaxID=2024852 RepID=A0A2E2JBD4_9GAMM)

HSP 1 Score: 209 bits (531), Expect = 3.980e-57
Identity = 170/431 (39.44%), Postives = 225/431 (52.20%), Query Frame = 1
Query:  109 VTVLALG-AGLAVIADDAMRILGHLPVTTLQPWHSLLLDTRLGQVWLFKQ--ALLVVLAVTLFAGRHTGRGLLLARIGLAGAFLAAGAWAGHG-GVSAPLAIFLPLHALHGIVSAAWLGALPVWA-SLLASAGEQPDE--RRYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFASWPALFATSAAALLWLKLALLAVVFGAAWRLRRDHLARL--AADYGPP-ARAA-ALRVFVLELGAAALLFVVALELAHSTPGAHQ-DVRWWLPFRL-LPAVLSNNNFAQWQLTLALTIIACA-------GPAWALQHRKLASCALVLGMLIAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDLAQ-HTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
            VTVLA+G AGL       +  LG     T   W +L++ T  GQ+WL +   A L+++ V +   R   R      I  A  +L    W GHG G  AP  + LP +  H +  A W GALP W  ++ A A  Q        L  ALQRFS+ +M  M V++++G  +A     +   L  T    LL  K+ LLA     A RLR   L  L  AA++  P AR+A ALR   +ELGAA  + + A+ LA +TP  H+ +  WWLPFR    A  ++ +   W L     +IA         G + +   R  A+  +V    +   A AV A+P T+ R  VPY  QS+A G  L+ QHCTACHGTGG GDG LA    VPP +L++ HTALH+AGDM+ WLS G     MPGF AVL+E  RWDLIN
Sbjct:   50 VTVLAVGHAGLMWAQMLTLVPLGG----TAADWRNLVMGTHFGQIWLIRAGAAALLLVCVLVAMIRPVQRARWACAIAAA-LYLGLAPWGGHGAGAEAPWQV-LPPNIAHMLAVAVWFGALPSWLLTVRAYARNQSSALTTSALSAALQRFSQLSMALMAVIVVTGVWLADLYIENEGDLLGTRYGGLLVGKVGLLAFALLFANRLRTGFLPVLKRAANHAEPRARSALALRHVAVELGAATGVLLCAVWLAQTTPAFHEPEPHWWLPFRWSFEATWADPSLRVWMLGALAALIAAGFAATWRRGASTSTSLRVTAAVLVVAAFSVLAWAFAVPAYPDTFRRSQVPYLTQSVANGRELFMQHCTACHGTGGLGDGPLAATLPVPPANLSEPHTALHTAGDMYWWLSHGIPESGMPGFGAVLSEDDRWDLIN 474          
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: A0A4P6WY62_HYDPS (Inner membrane protein YebZ n=1 Tax=Hydrogenophaga pseudoflava TaxID=47421 RepID=A0A4P6WY62_HYDPS)

HSP 1 Score: 198 bits (504), Expect = 6.760e-53
Identity = 171/483 (35.40%), Postives = 241/483 (49.90%), Query Frame = 1
Query:   55 EPAALRTWATRVAMALR-WVTVLALGAGLAVIADDAMRILGH-LPVTTLQPWHSLLLDTRLGQVWLFKQALLVVLAVTLFAG-----RHTGRGLLLARIGLAGAFLAAGAWAGHGGVSAPLAIFLPLHALHGIVSAAWLGALPVWAS--LLASAGEQPDERRYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFAS---WPA-------------------LFATSAAALLWLKLALLAVVFGAAWRLRRDHLARL---AADYGPPARAAA--LRVFVLELGAAALLFVVALELAHSTPGAHQDVRWWLPFRLLPAVLSNNNFAQWQLTLALTIIACAGPAWALQH--------------RKL----ASCALVLGMLIAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDLAQ-HTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
             PAA R W  RV MA+  W+  L+L A + ++   A  + G    V     W  LL  TR G VW  +QA+ +++ + L A      R   R + +A +GLA A  A+ A++GHG  + P+ +    HALH + + AW GALP  A    LA++G  P  R      L+RFS  A   + +++ SG LI + QF +   WPA                   L +T     +  KL LLA+V   A R+R   + RL   A   G   RA A  LRV   ELG   L+ V A  L  + P AH  + W LPFRL  ++ +N       L +A   +   G    L H              R++    A+ A V G++  +  ++V A+P TY R  + Y A S+ARG AL+++HC +CHG GG+GDG LA R    P DL + HTALH+AGD+F WL+ G    AMPGF   +  +QRWD++N
Sbjct:   35 SPAATR-W-RRVVMAVAPWLLALSLVAAVGLLMLQAASVSGRGEAVFEGAEWLRLLERTRYGAVWQVRQAIALLMLLLLLAREPLFTRFGERAVTVALLGLAVAMNASAAFSGHGAATEPVWLAGTGHALHLLAAGAWAGALPALAYGVYLAASGHDPLWRPMFALLLRRFSLLATICVALIVASGLLITYLQFGAPTRWPARSDDLLGGLMTVIERSFAPLLSTPFGLQVLAKLVLLALVLLLAARIRWVWMPRLGSGAHGQGGVWRAVAGLLRV---ELGIVMLILVFAAGLTGTLPAAHDQMVWPLPFRL--SIAANWGQKGVALKVAGAALLALGGLAVLWHTAWSGAGGNVTPGGRRIRLGAAALATVAGLVFGLHTLSVPAYPDTYRRTDISYNAVSVARGAALFSRHCISCHGAGGKGDGPLAARLPAKPVDLTEPHTALHTAGDLFWWLTHGKPQTAMPGFAQEMTPEQRWDVVN 510          
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: UPI000BBC76F6 (c-type cytochrome n=2 Tax=unclassified Polaromonas TaxID=2638319 RepID=UPI000BBC76F6)

HSP 1 Score: 196 bits (499), Expect = 2.380e-52
Identity = 160/472 (33.90%), Postives = 226/472 (47.88%), Query Frame = 1
Query:   76 WATRVAMALRWVTVLALGAGLAVIADDAMRILGHLPVT-TLQPWHSLLLDTRLGQVWLFKQALLVVLAVTLFA-----GRHTGRGLLLARIGLAGAFLAAGAWAGHGGVSAPLAIFLPLHALHGIVSAAWLGALPVWAS--LLASAGEQPDERRYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFAS---WPA-------------------LFATSAAALLWLKLALLAVVFGAAWRLR---RDHLARLAADYGPPARAAALRVFVLELGAAALLFVVALELAHSTPGAHQDVRWWLPFRLLPAVLSNNNFAQWQLTLALTIIACAGPAWALQH-------------RKLASCALVL----GMLIAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDLAQ-HTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
            W   V  A  W+  L L     ++   A  + G          W  LL  TR G VW  +QA  +VL + L +      R   R + +A + LA    AA  + GHG  + PL +    HA+H + + AW G LP  A    LA+ G  P  R+  L  L+RFS  A   + ++  SG LIA+ QF +   WPA                   L +TS    +  K+ LL  V   A R+R      + ++A + G   + AA  V V ELG   L+ + A  L  + P AH  + W LPFRL  A   +         +  +++A  G AW +               R++   A VL    G++I + A++V A+P TY R  V Y A S+ RG ALY+QHC +CHG GG+GDG LA R    P DL + HTALH+AGD+F WL+ G  + AMPGF   + E++RWD++N
Sbjct:   40 WRGAVFAAAPWLVALLLATAAGLLMLQAASVSGRGEAAFEWSEWVRLLERTRYGAVWQVRQAAALVLLLLLLSRGPLSARFGERVVCVALLTLALGINAASVFTGHGAATEPLWLAGAGHAVHLLAAGAWAGGLPALAYGLHLAARGRDPPFRQMFLGVLRRFSVLATVCVALIAASGTLIAYLQFGAPIRWPARTDDIFGGLMTVLERSLAPLLSTSFGLQVLAKMVLLVPVLLVAARVRWVWMPRMGKVAFEQGLAWQGAAGLVRV-ELGVVLLILLFAAGLTGTLPAAHAQMVWPLPFRLSLAATWDKPGGV-NTVVGASLLAMGGLAWLVHALVSGPRADAAQGGRRIRLGAAVLMTLSGLVIVLYALSVDAYPDTYRRTDVSYNAVSVTRGAALYSQHCVSCHGPGGKGDGPLATRLPTRPADLTEPHTALHTAGDLFWWLTHGKPNTAMPGFAQEMTEEERWDMVN 509          
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: A0A7V4CZE0_9BACT (C-type cytochrome n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V4CZE0_9BACT)

HSP 1 Score: 191 bits (484), Expect = 1.880e-50
Identity = 170/467 (36.40%), Postives = 226/467 (48.39%), Query Frame = 1
Query:   10 VGCLGASLFLWRASAEPAALRTWATRVAMALRWVTVLALGAGLAVIADDAMRILGHLPVTTLQ--PWHSLLLDTRLGQVWLFKQALLVVLAVTLFAGRHTGRGL-LLARIG----LAGAFLAAGAWAGHGGVSAPL-AIFLPLHALHGIVSAAWLGALPVWASLLASAGEQP--DERRYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFASWPALFATSAAALLWLKLALLA--VVFGAAWRLRRDHLARLAADYGPPARAAALRV---FVLELGAAALLFVVALELAHSTPGAHQDVRWWLPFRLLPAVLSNNN------FAQWQLTLALT--IIACAGPAWALQHRKLASCALVLGMLIAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDL-AQHTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
            VG   A L   R+  + A    W  R+    RW+ + A+ +G+AV+A  A  + G  P   L       L LDT+ G VWL +  LLV+LA  +     T R    +A  G    LA A LA    AGH     P  A+ + + A H + +  W+GALP  A+LL +A  +   D R + + A++RFSR A+  +  L  SG   A  Q      L  T    LL LKL+LL   +V G   R     L+R AA      RAA  R+    V+E   A L+  V   LA + P  H+   W LPFRL  + L +             L L +T  + A A P   L    L S     G  +A+ A+AV A+P+TY RP V Y A SIA G  LY + C  CHG  G GDG  A     PP DL A HT  H+AGD+F W+++G  +  MPGF   L E+QRWDL+N
Sbjct:   23 VGAFAAVLLAGRS--DRATALAWEARMTRWARWLLLAAIASGVAVLAHQASVVEGR-PGAALDLGALRRLALDTQGGIVWLARHGLLVLLAAFVALPADTSRRADWVAARGESALLALAALALLGLAGHAAAVEPATALAIAVDATHLVAAGVWIGALPAMAALLFAASREAGADARPHAVLAIRRFSRLALAAVLALAGSGAWTASNQVGGVAGLVGTPYGRLLLLKLSLLVPILVLGTLNRRLLGALSREAAV----GRAAMRRLAGSIVVEAALALLVVAVVAALATTPPARHETPSWPLPFRLALSALQDETARARAFVGSQALVLGVTAALAALALPGRRLVLAGLGSGLAAAGAALALPALAVDAYPTTYVRPAVAYHATSIAEGARLYRESCAGCHGPTGAGDGPAAGSLPRPPADLRAPHTGQHTAGDLFWWITNGIPASGMPGFGDRLGEEQRWDLVN 482          
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: A0A1F4IS59_9BURK (Cytochrome c domain-containing protein n=4 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1F4IS59_9BURK)

HSP 1 Score: 191 bits (484), Expect = 3.050e-50
Identity = 159/478 (33.26%), Postives = 224/478 (46.86%), Query Frame = 1
Query:   76 WATRVAMALRWVTVLALGAGLAVIADDAMRILGH-LPVTTLQPWHSLLLDTRLGQVWLFKQALLVVLAVTLFAGRHTGRGLLLARIG--------LAGAFL--AAGAWAGHGGVSAPLAIFLPLHALHGIVSAAWLGALPVWASLL--ASAGEQPDERRYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFAS---WPA-------------------LFATSAAALLWLKLALLAVVFGAAWRLRRDHLARL---AADYGPPARAAALRVFVLELGAAALLFVVALELAHSTPGAHQDVRWWLPFRL-LPAVLSNNNFAQWQLTLALTIIACAGPAWALQ-----------------HRKLASCALVLGMLIAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDLAQ-HTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
            W   +  A  W+  L L     ++   A  + G    V     W  LL  TR G VW  +QA  ++L + L      GRG L+AR G        L  A L  AA  + GHG  + PL +    H +H + +  W G LP  A  L  A+ G  P  R+  L  ++RFS  A   + +++ SG LIA+ QF +   WPA                   L ATS    +  K+ LL +V   A R+R   ++R+   A + G   + AA  V V ELG   L+ + A  L  + P AH  + W LPFRL L A       A     +  +++A  G  W+L                     +A  A+  G+   + A++V A+P TY R  V Y A S+ RG  LY+QHC +CHG GG+GDG  A R    P +L + HTALH+AGD+F WL+ G    AMPGF   + E++RWD++N
Sbjct:   40 WRAAILAAAPWLVALLLATTAGLLMLQAASVSGRGEAVFEWSEWTRLLERTRYGAVWKLRQATALILLLLLL-----GRGPLIARFGERVVDVVLLIPALLINAAAVFTGHGAATEPLWLAGVGHVVHLLAAGVWAGGLPALAYGLHMAAGGRDPLFRKMFLGVVRRFSVLATVCVALIVASGSLIAYLQFGAPTRWPARTDDIFGGLMTVLERSLAPLLATSFGLQVLAKMVLLMLVLLVAARVRWVWMSRMGQGAFEQGLAWQGAAGLVRV-ELGVVLLILLFAASLTGTLPAAHAQMAWPLPFRLSLAATWDQPGVAA--TVVGASLLAMGGLVWSLHTIVSRPRTGAARGVDRWRLGIAVLAISSGLTTGLYALSVDAYPDTYRRTNVSYNAVSVTRGAVLYSQHCVSCHGPGGKGDGPQATRLPTRPANLTEPHTALHTAGDLFWWLTHGKPRTAMPGFAQEMTEEERWDMVN 509          
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: A0A3C1GD95_9BACT (Cytochrome c domain-containing protein n=2 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A3C1GD95_9BACT)

HSP 1 Score: 190 bits (483), Expect = 3.080e-50
Identity = 160/451 (35.48%), Postives = 217/451 (48.12%), Query Frame = 1
Query:   70 RTWATRVAMALRWVTVLALGAGLAVIADDAMRILGHLPVTTLQ--PWHSLLLDTRLGQVWLFKQALLVVLA-VTLFAGRHTGRG----LLLARIGLAGAFLAAGAWAGHGGVSAPLAIFLPL-HALHGIVSAAWLGALPVWASLLASAGEQP--DERRYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFASWPALFATSAAALLWLKLALLAVVFGAAWRLRR--DHLARLAADYGPPARAAALRVFVLELGAAALLFVVALELAHSTPGAHQDVRWWLPFR-----------LLPAVLSNNNFAQWQLTLALTIIACAGPAWALQHRKLA----SCALVLGMLIAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDLA-QHTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
            R W   +    R +  LAL +GL ++A  +  + G  P   L+   W  +LL+TR G VWLF+  LL++LA + L   R         L +    L  A LAA  WAGH     P A++  L  A H I + AWLG L   + LL SA  +   D R   + A++RFS  A+  M +L  +G   +W Q    PAL  T    LL LK+ L+  V   A R RR    L+  AA+ G PA A   R+  +E    AL  VV   L  + P  H+   W L FR           L P VL  +  A       + ++A    A   + R L     + A+  G+L+A+  + V A+P TY RP   Y A S+ RG+ALY +HC  CHG  G GDG         P DL   HTA H+AGD+F WL+ G   G MPGF   L  ++RWD++N
Sbjct:   38 RAWDEGLGRWARRLAGLALLSGLLLVAHQSAHLAGR-PAAALELAAWLGVLLETRWGAVWLFRHVLLLLLAALALLREREESTADWAALRIESWLLGAAALAALGWAGHAAAVEPGALWAALADATHLIAAGAWLGTLLPLSLLLRSASREAGADSRPEAVVAVRRFSGIALAAMLLLGATGIGNSWSQVGGVPALVGTRYGRLLLLKIVLVLAVLIVASRSRRLLPALSGDAAEVGRPAMARLGRLVAIEWVLGALALVVVSVLTVTPPARHESPSWPLSFRFSYNVAVGPAGLQPRVLVGSQVA------VVGLLAVVTGALLRRRRGLVLGAGAAAIAAGLLLALPPMTVDAYPYTYRRPAATYHAGSVTRGMALYREHCAECHGAAGLGDGPRGSGLPRKPADLTGPHTAEHTAGDIFWWLTHGIPRGGMPGFAEKLGAEERWDVVN 481          
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: A0A2V7A8I9_9BACT (Cytochrome c domain-containing protein n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7A8I9_9BACT)

HSP 1 Score: 190 bits (482), Expect = 3.540e-50
Identity = 166/447 (37.14%), Postives = 222/447 (49.66%), Query Frame = 1
Query:   70 RTWATRVAMALRWVTVLALGAGLAVIADDAMRILGHLPVTT-LQPWHSLLLDTRLGQVWLFKQALLVVLAVTLFAGRHTGRGL--LLAR---IGLAGAFLAAGAWAGHGGVSAP-LAIFLPLHALHGIVSAAWLGAL-PVWASLLASAGEQ-PDERRYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFASWPALFATSAAALLWLKLALLAVVFGAAWRLRRDHLARLAADYGPPARAAALR---VFVLELGAAALLFVVALELAHSTPGAHQDVRWW-----LPFRLL---PAVLSNNNFAQWQLTLALTIIACAGPAWALQHRKLASCALVL---GMLIAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDL-AQHTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
            R W  RV    R + ++ALG+GL V+A       G             +L++T+ G+VWL +  LLV+LA  L++     R L    AR   + L  A L   A AGH     P  A  + L  LH I +  W+G L P+   L A+A E+  D R Y + A +RFSR A+  + VL+ +G L+A     +   L  T+   LL  KL L+      A   R  HL RLA D GP     A+R    FV   G  AL  +  +     TP A  +   W     L FR L   PA             L L  +A AG     +   L + ALV+   G  +A+  +A+ A+P+TY RP+VPY A SIA G ALY +HC +CHG GG GDG   +R   PP DL A HTA H+AGD+F WLS+G  +  MP F   L+E+QRWDL+N
Sbjct:   38 RRWEHRVLAGSRGLALVALGSGLVVLAVQTALFEGRAGAALEAGAIARVLIETQAGRVWLVRFGLLVILAALLWSRLSVERALDWRAARGQAVLLGAAALVPIAAAGHAAAVEPETARAVALDGLHVIGAGVWVGGLLPLTLLLWAAADERGADARPYAVLAARRFSRVALGVVLVLVATGTLLAIANVGNVAGLVGTAYGRLLLAKLGLVLAALALAAVNRAVHLGRLAGD-GPTVGRPAMRRLATFVAGEGLIALAILAIVATMSVTPPARHEAPTWPFAIRLSFRALEGAPAAFVRVLVGSQVAVLGLVGLA-AGLTLRGRRLPLVAGALVVLGAGTGLALPPLAIDAYPTTYRRPSVPYQAASIASGAALYREHCASCHGLGGAGDGPAGVRLPRPPADLRAPHTAQHTAGDLFWWLSNGIPAAGMPAFGRELSEEQRWDLVN 482          
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: A0A4S3KAA3_9GAMM (Putative copper resistance protein D n=1 Tax=Panacagrimonas perspica TaxID=381431 RepID=A0A4S3KAA3_9GAMM)

HSP 1 Score: 188 bits (478), Expect = 1.000e-49
Identity = 160/460 (34.78%), Postives = 215/460 (46.74%), Query Frame = 1
Query:   19 LGASLFLWRASAEPAAL--RTWATRVAMALRWVTVLALGAGLAVIADDAMRILGHLPVTTLQPWHSLLLDTRLGQVWLFKQALLVVLAVTLFAGRHTGRGLLLARIGLAGAFLAAGAWA-----GHGGVSAPLAIFLPLHALHGIVSAAWLGALPVWASLLASAGEQPDER--RYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFASWPALFATSAAALLWLKLALLAVVFGAAWRLRRDHLARLAADYGPPARAAALRVFVLELGAAALLFVVALELAHSTPGAHQDVRWWLPFRLL-------PAVLSNNNFAQWQLTLALTIIACAGPAWALQHRKLASCALVLGML---IAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDLAQ-HTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
            +G +LFL RA   PA    R W   +   L    +L   A LAV+   A  + G      L     L  DT  G  W  +    + +         T   LL A   +  +F AA   A     GH   +   A  +PLH  H +  +AWLGALP W  L   A  +PD R   ++  AL+RFSR AM  M V++ +G ++A++       L  T    LL  KL +L  V   A  +RR  L RL       A AA      LE   A  L  +   LA + P  H    WW+P RL        PA       A W L  AL + A A  A   + R L     V+G+     A+  ++V AFP T+ RP VPY + SI +G   +  +CTACHG+GG GDG L      PP +L++ HTALH+ GDM+ W + G  +G MPGF  VL+++QRWDL+N
Sbjct:   21 IGVTLFLLRAGPLPAGEEPRAWDRGLRRTLPIAALLLCLALLAVLHAQACGVAGGWASPDLMA--QLARDTAYGHWWCLRALGAMAVLFIACVATATPAPLLRAAALVGTSFAAATTIALAPLTGHAAGTEQAAWLVPLHMAHLLALSAWLGALPAWIGLARRAAHEPDARIRDFVARALERFSRLAMACMAVIVGTGVVLAFQFIDDQGDLLGTRYGLLLCAKLVVLVFVLRIADAVRRRVLPRLRTAEASDAFAAGATSVRLEWWLALGLLGLGATLAQTVPAIHDQPSWWMPVRLSFEAGWADPA----TRVAIW-LGAALIVFAAALIAPMRRSRPLRMAVSVIGVAGVATALWGLSVSAFPDTFLRPPVPYLSLSIDQGRRAFEANCTACHGSGGLGDGALGKTMRKPPANLSEPHTALHTPGDMYWWFTHGMPAGPMPGFAGVLDDEQRWDLVN 473          
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: A0A2V6WM62_9BACT (Cytochrome c domain-containing protein n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6WM62_9BACT)

HSP 1 Score: 188 bits (478), Expect = 1.200e-49
Identity = 171/468 (36.54%), Postives = 225/468 (48.08%), Query Frame = 1
Query:   25 ASLFLWRASAEPAALRTWATRVAMALRWVTVLALGAGLAVIADDAMRILGHLPVTTLQPWHS-LLLDTRLGQVWLFKQALLVVL------------AVTLFAGRHTGRGLLLARIGLAGAFLAAGAWAGHGGVSAP-LAIFLPLHALHGIVSAAWLGALPVWASLLASAGEQP--DERRYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFASWPALFATSAAALLWLKLALLAVVFGAAWRLRRDHLARL---AADYGPPARAAALRVFVLELGAAALLFVVALELAHSTPGAHQDVRWWLPFRLLPAVLSNNNFAQWQLTLALTIIACAGPAWALQHRKLASCALVL----------GMLIAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDL-AQHTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
            A++ +    ++ A    W +RV    R +  LAL  G+ V+   A  +          P  + + L+TR G VWL +  LL++L            AV   A R  G+ +LLA + LA   LAAG   GH     P  A+ +     H + +  W GALP    LL +A      D R Y + A +RFSR A+  + VLL SG +IA  Q  S  AL  T    LL +KLAL+ V   AA   RR  L  L   AA  G P+     R  ++E   A  +  V   L  + PG H+   W L FRL    L++   A W L L  + IA  G    L    L +  L L          G+ +AV   A  A+P+TY RP VPY A SIA G ALYA+ C  CHG+ G GDG  A   S PPPDL A HTALH+AGD++ W++ G    AMP F   L  +QRW L+N
Sbjct:   23 AAMLVLAGRSDRATALAWQSRVEALTRALVWLALAFGVVVLGHQAATLESRGAAAIEAPALARVALETRFGHVWLVRHGLLLLLGAFVAFRFDLRRAVDWRAAR--GQSVLLAALALAA--LAAG---GHSAAVEPSAAVAIAADVGHLLAAGVWAGALPALVVLLRAASRDAGADARPYAVVAARRFSRAALALVLVLLTSGVVIAAAQVGSVGALLGTHYGRLLMVKLALVLVALTAATLARRRVLPALGGDAATIGRPSMRRLGRTVLVEAVCALAILAVVTLLGVAPPGRHETPDWPLSFRLALGALADAPDA-WPLVLVGSQIAILGVVAVLCSLVLRAAQLPLLAGGGVLLLAGVAMAVPPFATDAYPTTYQRPAVPYQAASIAAGAALYARACATCHGSSGGGDGPTARALSPPPPDLRAHHTALHTAGDLYWWITHGRR--AMPAF-GHLEPEQRWSLVN 479          
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Match: A0A2V6Z757_9BACT (Cytochrome c domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6Z757_9BACT)

HSP 1 Score: 188 bits (478), Expect = 1.300e-49
Identity = 172/474 (36.29%), Postives = 226/474 (47.68%), Query Frame = 1
Query:   19 LGASLFLWRASA--------EPAALRTWATRVAMALRWVTVLALGAGLAVIADDAMRILGHLPVTT-LQPWHSLLLDTRLGQVWLFKQALLVVLAVTLF--------AGRHTGRGLLLARIGLAGAFLAAGAWAGHGGVSAP-LAIFLPLHALHGIVSAAWLGALPVWASLL--ASAGEQPDERRYLLHALQRFSRFAMDTMGVLLISGCLIAWRQFASWPALFATSAAALLWLKLALLAVVFGAAWRLRRDHLARLAADYGPPARAAALRV--FVLELGAAAL-LFVVALELAHSTPGAHQDVRWWLPFRLLPAVLSNNNFAQWQLTLALTIIACAG----------PAWALQHRKLASCALVLGMLIAVQAVAVRAFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVPPPDL-AQHTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN 1338
            L +SLFL  ASA        + +  R W  R+  + R + V+A  +GL V+        G       +     +L++T+ G+VWL + A LV+LA  L         A     RG +     L  A L   A AGH     P  A  +    LH +V+  W+G L   A LL  A+  E  D R Y + A +RFSR A+  M +L ++G L+A     S      TS   LL  KL LL +    A   R   LARLA D     R A  R+  FV+  G  AL +  V   L+ + P  H+   W    RL  A L     A+   TL  + IA  G            W L    LA  AL  G  +A+  +A+ A+P+TY RP+VPY A SIA G ALY + C ACHG+ G GDG   L    PP DL A HTA H+AGD+F WL++G  +  MPGF A   E+QRWDLIN
Sbjct:   13 LTSSLFLVGASAMIVIAGPSDRSTARRWEHRILSSARGLAVVAFASGLVVLGVQTALFEGRAAAALEVGAIGRVLVETQTGRVWLVRFAFLVMLAAFLLLRLSVERRADWRAARGEVAL---LGAAALVPIAAAGHAAAVDPDTARAIAFDGLHVVVAGVWVGGLLPLALLLRTAATSEGADARPYAVLAARRFSRLALGAMVMLAVTGALLATIHVGSVAGFVGTSYGRLLLAKLVLLGIALLLAAVNRTVLLARLAGDGPTVGRPAMRRLSGFVVAEGLLALAILAVVAALSVTPPARHEAPVWPFGIRLSVAALEGAT-AEATRTLIGSQIAVLGLVAMIAGVILRTWRLPLVALALVALGAGAGLALPPLAIDAYPTTYLRPSVPYQAASIASGAALYRESCAACHGSEGAGDGLAGLALPRPPADLRAPHTAQHTAGDLFWWLTNGIPAAGMPGFGARFTEEQRWDLIN 482          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17305.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2JBD4_9GAMM3.980e-5739.44Cytochrome c domain-containing protein n=1 Tax=Pol... [more]
A0A4P6WY62_HYDPS6.760e-5335.40Inner membrane protein YebZ n=1 Tax=Hydrogenophaga... [more]
UPI000BBC76F62.380e-5233.90c-type cytochrome n=2 Tax=unclassified Polaromonas... [more]
A0A7V4CZE0_9BACT1.880e-5036.40C-type cytochrome n=1 Tax=Candidatus Rokubacteria ... [more]
A0A1F4IS59_9BURK3.050e-5033.26Cytochrome c domain-containing protein n=4 Tax=Bet... [more]
A0A3C1GD95_9BACT3.080e-5035.48Cytochrome c domain-containing protein n=2 Tax=unc... [more]
A0A2V7A8I9_9BACT3.540e-5037.14Cytochrome c domain-containing protein n=2 Tax=Can... [more]
A0A4S3KAA3_9GAMM1.000e-4934.78Putative copper resistance protein D n=1 Tax=Panac... [more]
A0A2V6WM62_9BACT1.200e-4936.54Cytochrome c domain-containing protein n=2 Tax=Can... [more]
A0A2V6Z757_9BACT1.300e-4936.29Cytochrome c domain-containing protein n=1 Tax=Can... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17305contigP-wetherbeei_contig17305:3..1340 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1131553.JIBI01000067_gene1647
PFAMsAhpC-TSA,CopD,Cytochrome_CBB3
Model size1338
Max annot lvl28216|Betaproteobacteria
KEGG koko:K07245
KEGG TC9.B.62.1
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.01e-46
EggNOG OGsCOG1276@1|root,COG2010@1|root,COG1276@2|Bacteria,COG2010@2|Bacteria,1RG2C@1224|Proteobacteria,2WEJ9@28216|Betaproteobacteria,372HR@32003|Nitrosomonadales
DescriptionPFAM Copper resistance D
Cds size1338
COG categoryC
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186113.4350708-CDS-P-wetherbeei_contig17305:2..13401683186113.4350708-CDS-P-wetherbeei_contig17305:2..1340Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17305 3..1340 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17305.1.1prot_P-wetherbeei_contig17305.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17305 3..1340 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17305.1.1

>prot_P-wetherbeei_contig17305.1.1 ID=prot_P-wetherbeei_contig17305.1.1|Name=mRNA_P-wetherbeei_contig17305.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=446bp
AGAVGCLGASLFLWRASAEPAALRTWATRVAMALRWVTVLALGAGLAVIA
DDAMRILGHLPVTTLQPWHSLLLDTRLGQVWLFKQALLVVLAVTLFAGRH
TGRGLLLARIGLAGAFLAAGAWAGHGGVSAPLAIFLPLHALHGIVSAAWL
GALPVWASLLASAGEQPDERRYLLHALQRFSRFAMDTMGVLLISGCLIAW
RQFASWPALFATSAAALLWLKLALLAVVFGAAWRLRRDHLARLAADYGPP
ARAAALRVFVLELGAAALLFVVALELAHSTPGAHQDVRWWLPFRLLPAVL
SNNNFAQWQLTLALTIIACAGPAWALQHRKLASCALVLGMLIAVQAVAVR
AFPSTYTRPTVPYGAQSIARGVALYAQHCTACHGTGGRGDGELALRSSVP
PPDLAQHTALHSAGDMFAWLSDGTASGAMPGFRAVLNEQQRWDLIN
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mRNA from alignment at P-wetherbeei_contig17305:3..1340-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17305.1.1 ID=mRNA_P-wetherbeei_contig17305.1.1|Name=mRNA_P-wetherbeei_contig17305.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1338bp|location=Sequence derived from alignment at P-wetherbeei_contig17305:3..1340- (Phaeothamnion wetherbeei SAG_119_79)
GCAGGCGCAGTCGGATGTCTGGGCGCGAGTCTCTTTCTGTGGCGCGCCAG CGCAGAGCCGGCGGCCTTACGCACTTGGGCGACGCGCGTGGCAATGGCGC TGCGCTGGGTGACAGTGCTCGCTCTTGGCGCCGGCCTGGCGGTCATCGCC GACGATGCGATGCGCATCCTTGGTCACCTGCCGGTGACCACCTTGCAGCC CTGGCACAGCTTGTTGCTCGACACCCGCTTAGGCCAAGTGTGGCTGTTCA AGCAGGCGCTGTTAGTGGTGCTGGCGGTCACGCTGTTTGCCGGTCGTCAC ACTGGACGCGGTCTGTTGCTGGCGCGTATCGGCCTGGCCGGCGCCTTCCT GGCTGCCGGCGCCTGGGCCGGCCATGGTGGCGTCAGTGCGCCGCTGGCGA TTTTTCTGCCACTCCACGCGCTGCACGGCATCGTCAGTGCCGCCTGGCTG GGTGCCTTGCCGGTATGGGCCAGTCTGTTGGCGAGCGCCGGCGAGCAGCC CGACGAACGCCGCTACCTGTTGCATGCGCTACAGCGCTTCTCGCGTTTTG CCATGGACACAATGGGCGTGTTGCTGATCAGCGGTTGCCTCATCGCGTGG CGCCAGTTCGCAAGCTGGCCGGCGCTGTTTGCCACCAGTGCGGCGGCGTT GTTGTGGCTGAAGCTCGCCCTGCTCGCCGTGGTGTTCGGCGCGGCCTGGC GCCTGCGGCGCGATCATCTGGCGCGCCTTGCAGCGGACTATGGTCCGCCC GCACGCGCCGCTGCGTTGCGCGTCTTCGTGCTGGAGTTGGGCGCGGCCGC ACTGCTGTTTGTGGTGGCGCTGGAACTCGCGCACAGCACGCCGGGTGCCC ATCAGGATGTGCGCTGGTGGTTGCCGTTCCGCCTGTTGCCGGCGGTGTTG AGCAACAATAATTTCGCACAGTGGCAGTTGACCTTGGCACTGACCATCAT CGCTTGTGCGGGGCCGGCATGGGCCCTGCAACATCGCAAGCTCGCAAGCT GCGCCTTGGTGCTGGGCATGCTTATCGCTGTGCAGGCGGTGGCGGTACGC GCATTTCCCAGTACCTATACACGCCCCACTGTGCCCTATGGCGCACAGTC CATCGCACGTGGCGTCGCGCTTTATGCACAACACTGCACGGCCTGTCACG GCACGGGCGGACGGGGCGATGGCGAGTTGGCGCTGCGATCGAGCGTGCCG CCGCCCGATCTGGCGCAGCACACCGCCTTGCATAGTGCCGGTGACATGTT TGCCTGGTTGAGTGATGGCACAGCGAGTGGCGCCATGCCGGGATTTCGCG CAGTGCTCAACGAGCAGCAGCGCTGGGACCTCATCAAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17305:3..1340-

>mRNA_P-wetherbeei_contig17305.1.1 ID=mRNA_P-wetherbeei_contig17305.1.1|Name=mRNA_P-wetherbeei_contig17305.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1338bp|location=Sequence derived from alignment at P-wetherbeei_contig17305:3..1340- (Phaeothamnion wetherbeei SAG_119_79)
GCAGGCGCAGTCGGATGTCTGGGCGCGAGTCTCTTTCTGTGGCGCGCCAG
CGCAGAGCCGGCGGCCTTACGCACTTGGGCGACGCGCGTGGCAATGGCGC
TGCGCTGGGTGACAGTGCTCGCTCTTGGCGCCGGCCTGGCGGTCATCGCC
GACGATGCGATGCGCATCCTTGGTCACCTGCCGGTGACCACCTTGCAGCC
CTGGCACAGCTTGTTGCTCGACACCCGCTTAGGCCAAGTGTGGCTGTTCA
AGCAGGCGCTGTTAGTGGTGCTGGCGGTCACGCTGTTTGCCGGTCGTCAC
ACTGGACGCGGTCTGTTGCTGGCGCGTATCGGCCTGGCCGGCGCCTTCCT
GGCTGCCGGCGCCTGGGCCGGCCATGGTGGCGTCAGTGCGCCGCTGGCGA
TTTTTCTGCCACTCCACGCGCTGCACGGCATCGTCAGTGCCGCCTGGCTG
GGTGCCTTGCCGGTATGGGCCAGTCTGTTGGCGAGCGCCGGCGAGCAGCC
CGACGAACGCCGCTACCTGTTGCATGCGCTACAGCGCTTCTCGCGTTTTG
CCATGGACACAATGGGCGTGTTGCTGATCAGCGGTTGCCTCATCGCGTGG
CGCCAGTTCGCAAGCTGGCCGGCGCTGTTTGCCACCAGTGCGGCGGCGTT
GTTGTGGCTGAAGCTCGCCCTGCTCGCCGTGGTGTTCGGCGCGGCCTGGC
GCCTGCGGCGCGATCATCTGGCGCGCCTTGCAGCGGACTATGGTCCGCCC
GCACGCGCCGCTGCGTTGCGCGTCTTCGTGCTGGAGTTGGGCGCGGCCGC
ACTGCTGTTTGTGGTGGCGCTGGAACTCGCGCACAGCACGCCGGGTGCCC
ATCAGGATGTGCGCTGGTGGTTGCCGTTCCGCCTGTTGCCGGCGGTGTTG
AGCAACAATAATTTCGCACAGTGGCAGTTGACCTTGGCACTGACCATCAT
CGCTTGTGCGGGGCCGGCATGGGCCCTGCAACATCGCAAGCTCGCAAGCT
GCGCCTTGGTGCTGGGCATGCTTATCGCTGTGCAGGCGGTGGCGGTACGC
GCATTTCCCAGTACCTATACACGCCCCACTGTGCCCTATGGCGCACAGTC
CATCGCACGTGGCGTCGCGCTTTATGCACAACACTGCACGGCCTGTCACG
GCACGGGCGGACGGGGCGATGGCGAGTTGGCGCTGCGATCGAGCGTGCCG
CCGCCCGATCTGGCGCAGCACACCGCCTTGCATAGTGCCGGTGACATGTT
TGCCTGGTTGAGTGATGGCACAGCGAGTGGCGCCATGCCGGGATTTCGCG
CAGTGCTCAACGAGCAGCAGCGCTGGGACCTCATCAAC
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