mRNA_P-wetherbeei_contig17253.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17253.2.1
Unique NamemRNA_P-wetherbeei_contig17253.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A6I3F6M3_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A6I3F6M3_9ACTN)

HSP 1 Score: 198 bits (503), Expect = 1.390e-62
Identity = 101/153 (66.01%), Postives = 116/153 (75.82%), Query Frame = 1
Query:    4 LLYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTAGGRLLSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRRE-DGVITRAKAWAPPD 459
            +LYLVRHAKAGSRS W+ DDR RPLT AG  QA A+A RL+   A GRL+SSP+ RCV+TLQPLA   G+A+E DERL+E       L LL+TLP+GSVLCSHGDVIPDT+ AL+RRG  F G P+WRK SVWVL RE  G ITRA AW PPD
Sbjct:    1 MLYLVRHAKAGSRSTWEGDDRERPLTGAGRLQADALATRLSA-LATGRLVSSPYLRCVQTLQPLAATLGIAVELDERLAEETGFAGALTLLSTLPDGSVLCSHGDVIPDTINALERRGCAFAGAPEWRKASVWVLGREASGAITRAAAWPPPD 152          
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A4P5RTP5_9ACTN (Uncharacterized protein n=5 Tax=root TaxID=1 RepID=A0A4P5RTP5_9ACTN)

HSP 1 Score: 188 bits (477), Expect = 1.680e-58
Identity = 94/154 (61.04%), Postives = 114/154 (74.03%), Query Frame = 1
Query:    7 LYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAE---HTAGGRLLSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRREDGVITRAKAWAPPD 459
            +YLVRHAKAG RS +D DD LRPL+  G RQAVAI ERL++         LLSSP+ RC++TL+PLA      I+T+E L+EG      LEL+++LP GSVLCSHGDVIPD M+AL+RRG E  G+PDWRKG+VWVL RE+G ITRA AW PPD
Sbjct:    7 IYLVRHAKAGDRSGYDGDDTLRPLSGKGRRQAVAICERLSQLIVKLPEALLLSSPYIRCIQTLEPLAAERHAVIQTEECLAEGYDREGALELISSLPHGSVLCSHGDVIPDVMEALRRRGAEIIGDPDWRKGTVWVLERENGEITRAAAWPPPD 160          
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A6I2VNH7_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I2VNH7_9ACTN)

HSP 1 Score: 183 bits (465), Expect = 1.120e-56
Identity = 90/155 (58.06%), Postives = 110/155 (70.97%), Query Frame = 1
Query:    1 ALLYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTA---GGRLLSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRREDGVITRAKAWAPP 456
            + +YLVRHAKAG RS WD DD +RPL+  G RQAVAI +RL +  A     +L+SSP +RC++TL+PLA      +  D RL+EG      LEL++TLP GSV+CSHGDVIPD M ALQRR TE  G+PDWRKG+VWVL REDG +  A  WAPP
Sbjct:    5 STIYLVRHAKAGDRSSWDGDDTIRPLSGKGRRQAVAICDRLFDLIALHPDAQLISSPHRRCMQTLEPLAARLRSQVMPDPRLAEGYDREGALELISTLPNGSVMCSHGDVIPDVMAALQRRRTEIIGDPDWRKGTVWVLAREDGEVNEASVWAPP 159          
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A662DWA6_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662DWA6_9ACTN)

HSP 1 Score: 178 bits (452), Expect = 8.770e-55
Identity = 88/151 (58.28%), Postives = 110/151 (72.85%), Query Frame = 1
Query:    4 LLYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTAGGRLLSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRREDGVITRAKAWAPP 456
            ++YLVRHAKAG R  WD+DD  RPL+  G++QA AIA+RLA+H A   L SS + RCVETL+PLAK TG  + T++RL EG     VL+LLA + + +VLCSHGD+IP  +QAL+RRG E    PDWRK SVWVLRR+ G IT+ K W PP
Sbjct:    6 VVYLVRHAKAGERRIWDDDDESRPLSRRGNKQAEAIAKRLAKHGATA-LYSSSYVRCVETLEPLAKTTGNKVRTEQRLFEGEPFEGVLDLLAEVEDRAVLCSHGDIIPAVIQALERRGMEVETPPDWRKSSVWVLRRKKGRITKGKVWPPP 155          
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A3C2B4Y1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B4Y1_9ACTN)

HSP 1 Score: 177 bits (450), Expect = 1.820e-54
Identity = 91/155 (58.71%), Postives = 106/155 (68.39%), Query Frame = 1
Query:    7 LYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTAGGRLLSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRREDG----VITRAKAWAPPD 459
            LYLVRHAKAG RSRW  DDR RPLT  G  QA A+A RLA    G  ++SSP+ RCV+T++PLA ATG  +  DERL+E       L L+  LP+GSVLCSHGDVIP+T+ ALQRRG    G PDWRK SVWVL RE G     +T A AW PP+
Sbjct:    3 LYLVRHAKAGDRSRWVGDDRDRPLTGKGEAQAAALAARLAPLCTGD-VVSSPYLRCVQTVEPLAAATGRTVRADERLAEDTGFAGALALIGELPDGSVLCSHGDVIPETIAALQRRGCAIEGTPDWRKASVWVLSREAGDDATTVTSATAWPPPE 156          
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A6N2DN60_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DN60_9ACTN)

HSP 1 Score: 173 bits (438), Expect = 1.140e-52
Identity = 83/151 (54.97%), Postives = 106/151 (70.20%), Query Frame = 1
Query:    7 LYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTAGGRLLSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRRED-GVITRAKAWAPP 456
            LY+VRHAKAG R  W+ DD  RPL+  G +QA +++ERLA+    G L+SSP+ RCV+TL+PLA+  G  + TD RL+EGA     L LL  LP+ SVLCSHGD+IP+T++AL RRG + R  PDWRK SVWV+ R   G  TRA+ W PP
Sbjct:    3 LYIVRHAKAGERRAWNGDDEARPLSTKGQKQARSVSERLAKLKVSGLLVSSPYVRCVQTLEPLAEMVGTTVATDGRLTEGASFEGTLSLLDELPDQSVLCSHGDIIPETVKALVRRGLDVRSTPDWRKASVWVIERSAAGRYTRARVWPPP 153          
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A7X9KJ65_9ACTN (Histidine phosphatase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KJ65_9ACTN)

HSP 1 Score: 171 bits (433), Expect = 5.430e-52
Identity = 85/149 (57.05%), Postives = 105/149 (70.47%), Query Frame = 1
Query:   16 VRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTAGGRLLSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRRE-DGVITRAKAWAPPD 459
            +RHAKAG R+ W  DDRLRPL+  G RQA ++A  LA  T G  L+SSP++RC++T+QPL+      +  DERL E       L LLA LP+GSVLCSHGDVIPDTM ALQRRG    GEP+WRKGSVWVL+R+ +G +  A AW PP+
Sbjct:    1 MRHAKAGDRAAWKGDDRLRPLSKEGRRQADSLARLLARLTTG-ELVSSPYERCLQTVQPLSSVLRQPVREDERLGEATGFEGALALLAELPDGSVLCSHGDVIPDTMAALQRRGCTIVGEPNWRKGSVWVLQRDGEGEVVEATAWPPPE 148          
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A6I2WUK9_9ACTN (Uncharacterized protein n=6 Tax=root TaxID=1 RepID=A0A6I2WUK9_9ACTN)

HSP 1 Score: 168 bits (426), Expect = 8.350e-51
Identity = 82/150 (54.67%), Postives = 104/150 (69.33%), Query Frame = 1
Query:    7 LYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTAGGRLLSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRREDGVITRAKAWAPP 456
            +YLVRHAKAGSR RW+ DDR RPL+  G  QA  +AER        R+ SSP+ RCVET++PL++A G+ IE+ E L+E     P+++LL ++PE +VLCSHGD IP+T+ AL RRG E  G  DWRKGS WVL RE  + T A AW PP
Sbjct:    3 IYLVRHAKAGSRDRWNGDDRQRPLSDKGRVQAELLAERFVRVPVP-RIFSSPYVRCVETVEPLSRACGVDIESIEVLAEAGSFAPIIDLLLSVPEHTVLCSHGDTIPETIAALCRRGMEIDGPEDWRKGSTWVLDREGELFTHATAWTPP 151          
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A524B528_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B528_9ACTN)

HSP 1 Score: 167 bits (422), Expect = 6.920e-50
Identity = 83/153 (54.25%), Postives = 103/153 (67.32%), Query Frame = 1
Query:    7 LYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTAGGRLL-SSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRREDGVITRAKAWAPPDE 462
            LYLVRHAKAG R++WD DD LRPL+  G RQA A+A RLA   +   LL SSP+ RC +TL+PL +   L +  + RL+EG      LEL+ +LP GSV+CSHGDVIPD M ALQ RG EF  +PDWRK +VWVL R   ++  A  W PP +
Sbjct:   27 LYLVRHAKAGERAKWDGDDTLRPLSKKGWRQAEALAVRLAPLVSPSSLLVSSPYVRCQQTLEPLDRMVELGVRHESRLAEGYDRDGALELIQSLPNGSVMCSHGDVIPDVMAALQHRGAEFVTDPDWRKATVWVLTRVGDLVETAACWPPPPD 179          
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Match: A0A6I3CAF4_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3CAF4_9ACTN)

HSP 1 Score: 165 bits (418), Expect = 1.170e-49
Identity = 81/152 (53.29%), Postives = 107/152 (70.39%), Query Frame = 1
Query:    4 LLYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTAGGRLLSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSVLCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRRE-DGVITRAKAWAPP 456
            +++LVRHAKAG R+    DD  RPL+ AG  QA AI   L E  A   LL+SP+ RC++TL+PLA A  L +  D+RL+E   +  +LE++A  P+G+VLCSHGD+IPDTM ALQRRG +F GEP+W+K SVWV+ R+  G  T A+ WAPP
Sbjct:    1 MIFLVRHAKAGQRNDSAGDDMQRPLSKAGWTQAHAIVAPLLEAGAARTLLASPYVRCMQTLEPLAAALDLTVVADDRLAEAQSLSAMLEMIAEQPDGAVLCSHGDMIPDTMAALQRRGCDFIGEPNWKKASVWVIERDASGNATTARCWAPP 152          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17253.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3F6M3_9ACTN1.390e-6266.01Uncharacterized protein n=3 Tax=root TaxID=1 RepID... [more]
A0A4P5RTP5_9ACTN1.680e-5861.04Uncharacterized protein n=5 Tax=root TaxID=1 RepID... [more]
A0A6I2VNH7_9ACTN1.120e-5658.06Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A662DWA6_9ACTN8.770e-5558.28Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
A0A3C2B4Y1_9ACTN1.820e-5458.71Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A6N2DN60_9ACTN1.140e-5254.97Uncharacterized protein n=1 Tax=Ilumatobacter sp. ... [more]
A0A7X9KJ65_9ACTN5.430e-5257.05Histidine phosphatase family protein n=1 Tax=Actin... [more]
A0A6I2WUK9_9ACTN8.350e-5154.67Uncharacterized protein n=6 Tax=root TaxID=1 RepID... [more]
A0A524B528_9ACTN6.920e-5054.25Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A6I3CAF4_9ACTN1.170e-4953.29Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17253contigP-wetherbeei_contig17253:662..1126 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1313172.YM304_09680
Preferred namesixA
PFAMsHis_Phos_1,NUDIX
Model size465
Max annot lvl2|Bacteria
KEGG koko:K03574,ko:K08296
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.76e-47
EggNOG OGsCOG2062@1|root,COG2062@2|Bacteria
EC3.6.1.55
Descriptionphosphohistidine phosphatase, SixA
Cds size465
COG categoryT
BRITEko00000,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186112.0260959-CDS-P-wetherbeei_contig17253:661..11261683186112.0260959-CDS-P-wetherbeei_contig17253:661..1126Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17253 662..1126 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17253.2.1prot_P-wetherbeei_contig17253.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17253 662..1126 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17253.2.1

>prot_P-wetherbeei_contig17253.2.1 ID=prot_P-wetherbeei_contig17253.2.1|Name=mRNA_P-wetherbeei_contig17253.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
ALLYLVRHAKAGSRSRWDEDDRLRPLTPAGHRQAVAIAERLAEHTAGGRL
LSSPFQRCVETLQPLAKATGLAIETDERLSEGAIVGPVLELLATLPEGSV
LCSHGDVIPDTMQALQRRGTEFRGEPDWRKGSVWVLRREDGVITRAKAWA
PPDE*
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mRNA from alignment at P-wetherbeei_contig17253:662..1126-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17253.2.1 ID=mRNA_P-wetherbeei_contig17253.2.1|Name=mRNA_P-wetherbeei_contig17253.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig17253:662..1126- (Phaeothamnion wetherbeei SAG_119_79)
GCGTTGCTGTACCTCGTTCGACACGCAAAGGCCGGGAGCCGGAGCCGATG GGATGAAGACGACCGACTGCGTCCGTTGACGCCGGCCGGCCACCGCCAAG CGGTTGCCATCGCCGAGCGGCTGGCCGAGCACACGGCAGGCGGTCGCCTG CTGAGCAGTCCGTTCCAGCGATGCGTCGAGACGCTGCAGCCACTGGCCAA GGCGACCGGCTTGGCGATCGAGACCGACGAACGGTTGAGCGAGGGCGCGA TCGTCGGTCCGGTGCTGGAGCTGCTGGCGACGCTGCCCGAGGGCTCGGTG CTGTGCAGTCATGGCGACGTCATCCCGGACACCATGCAAGCACTGCAACG TCGTGGCACCGAATTCCGCGGCGAGCCCGACTGGCGCAAGGGAAGCGTGT GGGTGCTGCGCCGCGAGGACGGCGTGATCACCCGGGCGAAGGCGTGGGCA CCACCGGACGAGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17253:662..1126-

>mRNA_P-wetherbeei_contig17253.2.1 ID=mRNA_P-wetherbeei_contig17253.2.1|Name=mRNA_P-wetherbeei_contig17253.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig17253:662..1126- (Phaeothamnion wetherbeei SAG_119_79)
GCGTTGCTGTACCTCGTTCGACACGCAAAGGCCGGGAGCCGGAGCCGATG
GGATGAAGACGACCGACTGCGTCCGTTGACGCCGGCCGGCCACCGCCAAG
CGGTTGCCATCGCCGAGCGGCTGGCCGAGCACACGGCAGGCGGTCGCCTG
CTGAGCAGTCCGTTCCAGCGATGCGTCGAGACGCTGCAGCCACTGGCCAA
GGCGACCGGCTTGGCGATCGAGACCGACGAACGGTTGAGCGAGGGCGCGA
TCGTCGGTCCGGTGCTGGAGCTGCTGGCGACGCTGCCCGAGGGCTCGGTG
CTGTGCAGTCATGGCGACGTCATCCCGGACACCATGCAAGCACTGCAACG
TCGTGGCACCGAATTCCGCGGCGAGCCCGACTGGCGCAAGGGAAGCGTGT
GGGTGCTGCGCCGCGAGGACGGCGTGATCACCCGGGCGAAGGCGTGGGCA
CCACCGGACGAGTGA
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