mRNA_P-wetherbeei_contig17253.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A6I3EPG4_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3EPG4_9ACTN) HSP 1 Score: 174 bits (442), Expect = 4.780e-51 Identity = 102/222 (45.95%), Postives = 144/222 (64.86%), Query Frame = 1
Query: 4 VGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRSWGRIAAGVVVTLGIAGGLGWWVAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGVDNVAAYQKYQEVVKEEPDNVEALAYGAFLQINISGQAAPADAQVLYEQAIESFERAISIDPTYPDAHCLLAVVYGRF-EPINQPGAFSEATACLKFDPPADMRDAVQGLIVE-------NTPTT 645
GDVD+ D+ TLRDGY+ARA+ VL+ I+ GR+ L KR + W R A + TL +A LG +VA+S+GQRL GQS+TG P D+ A L ARQ G D A+ + Y +V++ EPDNVEA+ YGA+L++ ++G+++ DAQ++ + A+ AI IDPTY DAHC LAV GRF +P + SE ACL +PPA ++ ++ L+ E +TPTT
Sbjct: 29 AGDVDEHDFTTLRDGYVARASAVLQEIENGRSSLVPKRQQPWWRRVAIIGGTLVVAIALGVFVANSAGQRLPGQSLTGGKPADEVAIQLANARQSMGADPKASLEAYAKVLEIEPDNVEAITYGAWLKV-LTGRSS-GDAQMMVD-ALPELRHAIEIDPTYADAHCFLAVASGRFLDPPDAATGVSEGVACLNANPPAMLKGQIEQLVAELQLGSPTSTPTT 247
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A6I3WJT3_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3WJT3_9ACTN) HSP 1 Score: 160 bits (405), Expect = 1.980e-45 Identity = 97/216 (44.91%), Postives = 124/216 (57.41%), Query Frame = 1
Query: 1 DVGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRSWGRIAAGVVVTLGIAGGLGWWVAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGVDNVAAYQKYQEVVKEEPDNVEALAY-GAFLQINISGQAAPADAQVLYEQAIESFERAISIDPTYPDAHCLLAVVYGRFEPINQPGAFSEATACLKFDPPADMRDAVQGLIVENTPTT 645
+ GDV+ DY LRDGY ARAA VLRSI+ G+A+LP + RSW R+ + IA G GW VA SSGQRL G +ITG D+ A LL+EAR L G D A Q+Y V+ +PDN EA Y G L I+ Q+A DA A + ERAI +DPT+ D C LAV+ RFE + A A CL +PP++MR ++ T T+
Sbjct: 28 EAGDVEATDYQVLRDGYTARAAGVLRSIEHGQAVLPPRARRSWPRLIGAAAAVVLIALGTGWLVARSSGQRLPGDTITGGTSPDQVAVLLSEARSLLGADPAGASQRYLAVLSIDPDNAEARTYTGWLLAISTQNQSAT-DAAATLAIAKKDLERAIEVDPTFADPRCFLAVIAARFE-HDTATAKVRAAECLANNPPSEMRGMIESFAGSLTDTS 241
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A6I3C802_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3C802_9ACTN) HSP 1 Score: 157 bits (397), Expect = 2.380e-44 Identity = 100/220 (45.45%), Postives = 128/220 (58.18%), Query Frame = 1
Query: 1 DVGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRS-WGRIAAGV-VVTLGIAGGLGWWVAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGVDNVAAYQKYQEVVKEEPDNVEALAY-GAFLQINISGQAAPADAQVLYEQAIESFERAISIDPTYPDAHCLLAVVYGRFEPINQPGAFSEATACLKFDPPADMRDAVQGLI--VENTPTT 645
+ GDV+DADY LRDGY ARAA VLR+I+ G A + R R+ G+ VV +G+ GW VA SSGQRL G +ITG + D+ A LL+EAR L G D A Q+Y V+ +PDN EA Y G L I+ QAA D+ E A + ERAI IDPT+PD HC LAV+ RFE G A CL +PP +MR ++ +++ PTT
Sbjct: 28 EAGDVEDADYEALRDGYTARAATVLRNIEHGLAAAAPRAPRQRMRRVLVGLAVVAVGVT--AGWLVARSSGQRLPGDTITGGSSPDRTAVLLSEARALLGTDPAGASQRYLSVLSIDPDNAEAHTYTGWLLAISTQNQAA-GDSAATLEVAKKDLERAIEIDPTFPDPHCFLAVIAARFEKDLAAGKV-RAAECLANNPPTEMRGMIESFAGSLDSAPTT 243
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A3C2B5Y7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B5Y7_9ACTN) HSP 1 Score: 147 bits (372), Expect = 1.110e-40 Identity = 90/212 (42.45%), Postives = 131/212 (61.79%), Query Frame = 1
Query: 1 DVGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRSWGRIAAGVVVTLGIAGGLGWWVAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGV-DNVAAYQKYQEVVKEEPDNVEALAYGAFLQINISGQAAPADAQVLYEQAIESFERAISIDPTYPDAHCLLAVVYGRFE-PINQPGAFSEATACLKFDPPADMRDAVQGLIVE 630
+ GDVD D+ LRDGY+ARAA VLR I++G++ LPA+ R R +TL IA +GW VA +G+RL GQ+I+G ID+ +A L++ARQL D + + Q+Y EV+ EPDNVEA Y ++++ + Q+ D VL E + E A++IDPTY D+ CLL+V RF P + GA + ACL +PPA+M ++ ++ E
Sbjct: 28 EAGDVDVDDFVALRDGYVARAAAVLREIEDGKSRLPARPTRPLWRRLVVPAITLLIAVMMGWAVASFAGERLPGQTISGGPEIDEVSATLSQARQLLRQGDLLGSIQRYDEVLVLEPDNVEAATYSSWVRAVVGQQSG--DMAVLAE-GLAGLEDAVAIDPTYADSICLLSVAKARFVVPPDLDGARAAGDACLALNPPAEMTGMIEAMLTE 236
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A848UFQ4_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UFQ4_9ACTN) HSP 1 Score: 141 bits (356), Expect = 4.350e-38 Identity = 96/213 (45.07%), Postives = 122/213 (57.28%), Query Frame = 1
Query: 4 VGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRSWGR-IAAGVVVTLGIAGGLGWW-VAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGVDNVAAYQKYQEVVKEEPDNVEALAY-GAFLQINISGQAAPADAQVLYEQAIESFE---RAISIDPTYPDAHCLLAVVYGRFEPINQP-GAFSEATACLKFDPPADMRDAVQGL 621
GDVDDADY LRDGY RAA LR+I+ GRA LP +R +W R I G V L IA + WW ++ SS QRL GQ +G P D+ LLTEAR + + AA YQ V+ E P NVEAL Y G L I++ G+ D+ V+ Q ES E AI DP+YPD +C L +V GRF + Q A CL+ +PPA++R V+
Sbjct: 29 AGDVDDADYTALRDGYTVRAAATLRAIEAGRAALPERRAANWPRRIGTGAFVVLVIA--VVWWALSASSAQRLPGQQASGFDPRDREQLLLTEARAIQEREPAAAADLYQLVLDENPSNVEALTYRGWTLAIDLIGET---DSDVVAAQLRESVELLGAAIEADPSYPDPYCFLGIVQGRF--LGQADAAIPFVDRCLEQNPPAEIRGLVEAF 234
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A539E361_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E361_9ACTN) HSP 1 Score: 138 bits (347), Expect = 9.870e-37 Identity = 93/218 (42.66%), Postives = 121/218 (55.50%), Query Frame = 1
Query: 4 VGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRSWGRIAAGVVVTLGIAGGLGWWVAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGV-DNVAAYQKYQEVVKEEPDNVEALAYGAFLQINISGQAAPADAQVLYEQAIESFERAISIDPTYPDAHCLLAVVYGRF-EPINQPGAFSEATACLKFDPPADMRDAVQGLI--VENTPTT 645
VGDVD DY LRDGY ARAA VLR IDEGR+ L R + A V L +A GW VA S+GQR+AGQS+TG ID AA L AR + D V A ++Q+V + EPDN EA Y A+L + S A E A+ +F+R I+ +P Y D +CL AV RF E + A CL +PP+DMR ++ + +E TP++
Sbjct: 31 VGDVDGHDYEVLRDGYTARAAAVLREIDEGRSALAPPRRAKPVVVFAWVAGVLAVAVLSGWLVARSAGQRIAGQSLTGGEAIDDVAAKLAAARSMMQAGDFVGALGQFQQVNELEPDNAEARTYTAWLIVLTSPSLDDATRAEALEAAMTAFDRVIADEPGYADPYCLSAVAAARFLEVPDDDLARRRGNLCLANNPPSDMRGLIEQFLAGLELTPSS 248
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A0R2PI52_9ACTN (Uncharacterized protein n=2 Tax=unclassified Acidimicrobium TaxID=2646899 RepID=A0A0R2PI52_9ACTN) HSP 1 Score: 136 bits (343), Expect = 2.860e-36 Identity = 84/212 (39.62%), Postives = 125/212 (58.96%), Query Frame = 1
Query: 4 VGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRSWGR--IAAGVVVTLGIAGGLGWWVAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGVDNVAAYQKYQEVVKEEPDNVEALAYGAFLQINISGQAAPADAQVL-YEQAIESFERAISIDPTYPDAHCLLAVVYGRFEPINQPGAFSEATACLKFDPPADMRDAVQGLIVE 630
GD+DD DY L+ GY RAA V+++I+ G + + RS R + + +VV L I G GW+VA SGQRL G+S +G D A+LL +AR + D A + Y EV+K +PDNVEAL Y ++L I + + AP D +++ +++ E+AI++DP YPDAHC L +V R + GA + CL +PP ++ D V G++ E
Sbjct: 30 AGDIDDIDYEGLKAGYTQRAADVIKAIEAGTILNGTSKPRSASRRIVVSAIVVFLAI--GSGWFVAAQSGQRLPGESTSGGIE-DSTASLLAQARSINFSDPQRAVELYSEVIKLDPDNVEALTYRSWL-IALVSRDAPDDIKIIALATSLQGLEQAIAVDPDYPDAHCFLGIVRFRLA-ADAVGAKEQLDICLASNPPTEVLDFVTGIVEE 236
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A6L6CUT3_9ACTN (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=A0A6L6CUT3_9ACTN) HSP 1 Score: 131 bits (330), Expect = 2.430e-34 Identity = 81/208 (38.94%), Postives = 113/208 (54.33%), Query Frame = 1
Query: 1 DVGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRSWGRIAAGVVVTLGIAGGLGWWVAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGVDNVAAYQKYQEVVKEEPDNVEALAYGAFLQINISGQAAPADAQVLYEQAIESFERAISIDPTYPDAHCLLAVVYGRFEPINQP-GAFSEATACLKFDPPADMRDAVQGL 621
+ GD+DD DY L +GY RAA V++ I G A+LP ++ R + A VV L +A G GW VA SGQRL GQS +G D A LL +AR + D AA + Y E++K PD+VEAL Y ++L ++ +A + A + AI ++P YPDAHC L +V RF GA E C +PPA+++ V +
Sbjct: 28 EAGDIDDIDYAALHNGYTQRAAEVIKLISRGEALLPRRQSRPLTQRIAVVVGVLVLAVGAGWLVAAQSGQRLPGQSSSGGIE-DSTATLLAQARAINFSDPAAAIETYSEILKLNPDHVEALTYRSWLIALVAREATEEVKLMALAAATQGLGHAIEVEPDYPDAHCFLGIV--RFRLAGDALGAKEELDICASMNPPAEVQGFVDSI 232
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A6L6CB49_9ACTN (Uncharacterized protein n=6 Tax=root TaxID=1 RepID=A0A6L6CB49_9ACTN) HSP 1 Score: 131 bits (329), Expect = 3.170e-34 Identity = 87/212 (41.04%), Postives = 119/212 (56.13%), Query Frame = 1
Query: 1 DVGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRSWGRIAAGVVVTLGIAGGLGWWVAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGVDNVAAYQKYQEVVKEEPDNVEALAYGAFLQINISGQAAPADA-QVLYEQAIESFERAISIDPTYPDAHCLLAVVYGRFEPINQPG-AFSEATACLKFDPPADMRDAVQGLIVE 630
+ GD+DDADY TLRDGY++R A + R ++ P + RI A V V L +A G G VA SGQRL G+S TG A LL+ ARQL VD A + Y +V+K EPDNVEAL Y ++L + +S + A D Q+ A+ +A +DP YPDAHC L +VY RF + Q A + C++ +PPA + V ++ E
Sbjct: 24 EAGDIDDADYETLRDGYVSRTAAITRELEGIAKRQPLRVTPLRKRIVAIVAVLL-LAIGSGVSVAQFSGQRLPGESATGGIE-QSTAVLLSTARQLNFVDPSKAIELYSQVLKLEPDNVEALTYRSWL-LTLSARNATGDVKQLALITAVTDLTKAQEVDPEYPDAHCFLGIVYFRF--LEQASLAKKQLDVCVEMNPPASVSSFVNAIVKE 230
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Match: A0A4P5SB62_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5SB62_9ACTN) HSP 1 Score: 130 bits (328), Expect = 5.630e-34 Identity = 82/216 (37.96%), Postives = 118/216 (54.63%), Query Frame = 1
Query: 4 VGDVDDADYHTLRDGYIARAAVVLRSID-------EGRAMLPAKRDRSWGRIAAGVVVTLGIAGGLGWWVAHSSGQRLAGQSITGDAPIDKAAALLTEARQLTGVDNVAAYQKYQEVVKEEPDNVEALAYGAFLQINISGQAAPADAQVLYEQAIESFERAISIDPTYPDAHCLLAVVYGRFEPINQPGAFSEATACLKFDPPADMRDAVQGLIVE 630
VGD+D DY LR Y+AR A +++ I+ G A R R R V+V + +A G GW VA SGQRL+GQS++G D A++L+ AR +D AA + Y +V+ +PDN+EAL Y A+L I+ A Q+ + A ERAIS+D +YPDAHC L +V R + GA + T C +PPA+++ V ++ E
Sbjct: 31 VGDIDSDDYQALRSDYVARTAEIIKQIELPQSAGVAGEINKQASRLR---RTCFTVLVVVVVAAGTGWLVARQSGQRLSGQSLSGGIE-DSTASILSRARATNFIDPQAAIELYSQVLGLDPDNLEALTYRAWLLALIARSAGDEIKQLAFLSASSDLERAISLDASYPDAHCFLGIVRFRLA-ADAVGAREQLTICESQNPPAEVKSFVDSIVAE 241 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17253.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17253.1.1 >prot_P-wetherbeei_contig17253.1.1 ID=prot_P-wetherbeei_contig17253.1.1|Name=mRNA_P-wetherbeei_contig17253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp DVGDVDDADYHTLRDGYIARAAVVLRSIDEGRAMLPAKRDRSWGRIAAGVback to top mRNA from alignment at P-wetherbeei_contig17253:1..648+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17253.1.1 ID=mRNA_P-wetherbeei_contig17253.1.1|Name=mRNA_P-wetherbeei_contig17253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig17253:1..648+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17253:1..648+ >mRNA_P-wetherbeei_contig17253.1.1 ID=mRNA_P-wetherbeei_contig17253.1.1|Name=mRNA_P-wetherbeei_contig17253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig17253:1..648+ (Phaeothamnion wetherbeei SAG_119_79)back to top |