mRNA_P-wetherbeei_contig1722.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1722.2.1 vs. uniprot
Match: A0A835Z9G1_9STRA (Chalcone isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G1_9STRA) HSP 1 Score: 107 bits (268), Expect = 8.020e-26 Identity = 77/183 (42.08%), Postives = 99/183 (54.10%), Query Frame = 1
Query: 1 LAGVGVRVKKIGPAAVKVYGLGVYVDERGAKSALAKYNKTLYACISW-DEITKHSPGRQIFSPHTRRRLRQMNVKGDGAGQNCFAFALLGRSPLRLCAMSHSACCLFFFALWAG---EYGSTPPIQFGFACKPGSLCVSINGKAAGTVSSKALSSALQDVYLGAKAVSQGAKDSTADGIAKML 537
LAG GVRVKKIGPAA KVY +G+YVD A+S L+K++ T +S D K + + R++ G AL RL +A F L E + +QFGF CKPGSLCVSI+GK AGT++S+ L SA+ DVYLG AVS GAK S A+G++ M
Sbjct: 43 LAGTGVRVKKIGPAAFKVYAVGMYVDSAKARSELSKHSSTESRALSKSDAFFKDARSASFEKTLVLKMARKV-------GAEKMVNALAESVKPRLAPGGDAALEEFQTVLLDAVTKEGAANKGMQFGFVCKPGSLCVSIDGKTAGTINSEQLRSAMLDVYLGKDAVSPGAKTSFAEGMSSMF 218
BLAST of mRNA_P-wetherbeei_contig1722.2.1 vs. uniprot
Match: D7FP06_ECTSI (Chalcone Isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP06_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 2.690e-22 Identity = 75/189 (39.68%), Postives = 94/189 (49.74%), Query Frame = 1
Query: 1 LAGVGVRVKKIGPAAVKVYGLGVYVDERGAKSALAKYNKTLYACISWDEITKHSPGRQI------FSPHTRRRLRQMNV--KGDGAGQNCFAFALLGRSPLRLCAMSHSACCLFFFALWA-GEYGSTPP-IQFGFACKPGSLCVSINGKAAGTVSSKALSSALQDVYLGAKAVSQGAKDSTADGIAKML 537
L G GVRVKKIGPA VKVY +G+YVDE+ A L E+ K G + F+ + + V G AL R+ L A G+ G+ +QFGF CKPG+LCVS+NGK AGT+ S LSSA+ DVYLG KAVS GAK + A G+A +L
Sbjct: 56 LMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKEL--------------EVHKGEDGESLGKNDGFFTRVAKSNFEKTMVLKMAREVGTEKMVSALAESVKPRISGSKKPLDSFQDILLKAVGKEGAAKKGMQFGFVCKPGALCVSVNGKDAGTIKSGPLSSAMVDVYLGKKAVSPGAKKAFATGVAALL 230
BLAST of mRNA_P-wetherbeei_contig1722.2.1 vs. uniprot
Match: A0A7R9YAW0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAW0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.580e-20 Identity = 71/185 (38.38%), Postives = 95/185 (51.35%), Query Frame = 1
Query: 1 LAGVGVRVKKIGPAAVKVYGLGVYVDERGAKSALAKYN----KTLYACISWDEITKHSPGRQIFSPHTRRRLRQMNVKGDGAGQNCFAFALLGRSPLRLCAMSHSACCLFFFALWAGEYGST--PPIQFGFACKPGSLCVSINGKAAGTVSSKALSSALQDVYLGAKAVSQGAKDSTADGIAKML 537
LAG GVRVKKIGP AVKVY +G+YVD+R +S+L + +TL ++ + + +P + F +L+ G N + ++ R L A+S F L +G G + FGFA G L VSINGK G V+S+ L AL D YLG AVS AK S A G+ ML
Sbjct: 47 LAGTGVRVKKIGPVAVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFDKCF------QLKMARTVGGEKMVNALSESVRPRMKSELEALSE-----FQSVLQSGLKGGSCVKNTSFGFAANKGKLIVSINGKQEGVVASRELCDALTDTYLGEGAVSPDAKASFAKGLCNML 220
BLAST of mRNA_P-wetherbeei_contig1722.2.1 vs. uniprot
Match: A0A7S1XYD8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYD8_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 4.380e-18 Identity = 65/185 (35.14%), Postives = 93/185 (50.27%), Query Frame = 1
Query: 1 LAGVGVRVKKIGPAAVKVYGLGVYVDERGAKSALAKYN----KTLYACISWDEITKHSPGRQIFSPHTRRRLRQMNVKGDGAGQNCFAFALLGRSPLRLCAMSHSACCLFFFALWAGEYGS--TPPIQFGFACKPGSLCVSINGKAAGTVSSKALSSALQDVYLGAKAVSQGAKDSTADGIAKML 537
LAG+G R+K+IGP VKVY +G+YVD+R +S+L + +TL ++ + + +P + F L+ G N A ++ R + A++ F L AG G T FGFA G L VSINGK GTV+S+ L A D Y+G AVS AK + A G+ M+
Sbjct: 49 LAGMGCRIKQIGPVKVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFEKCFM------LKMARTVGSDKMVNALADSIKPRMKNEMEALTE-----FQGLLSAGLKGGSCTKNTAFGFAASKGKLVVSINGKEEGTVNSRELCDAFTDTYIGDNAVSPDAKSNFAKGLCAMI 222
BLAST of mRNA_P-wetherbeei_contig1722.2.1 vs. uniprot
Match: W7TIJ2_9STRA (Chalcone isomerase, subgroup n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIJ2_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.870e-11 Identity = 68/188 (36.17%), Postives = 91/188 (48.40%), Query Frame = 1
Query: 1 LAGVGVRVKK-IGPAAVKVYGLGVYVDERGAKSALAKY------NKTLYACI---SWDEITKHSPGRQIFSPHTRRRLRQMNVKGDGAGQNCFAFALLGRSPLRLCAMSHSACCLFFFALWAGEYGSTPPI--QFGFACKPGS-LCVSINGKAAGTVSSKALSSALQDVYLGAKAVSQGAKDSTADGI 525
LAGVGVRVKK +GP AVKVYG+G+YVD+ A L+K+ +K L+ + ++D+I R++ G AL RL S +A F L AG G QFGF + GS L V+INGK G ++S L+ AL YL AVS+ K+S A G+
Sbjct: 45 LAGVGVRVKKLVGPLAVKVYGVGLYVDKGVAVRKLSKFKGHKAGSKALFDALETGNFDKIVLLKMARKV-------------------GAATLVNALAESVKPRLGKGSEAALLQFQDVLLAGLKGGEAETGKQFGFGIQGGSKLIVTINGKKQGEIASGPLAQALLKTYLDNNAVSKDMKESVAQGL 213
BLAST of mRNA_P-wetherbeei_contig1722.2.1 vs. uniprot
Match: A0A6S9FSE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FSE1_HETAK) HSP 1 Score: 68.9 bits (167), Expect = 4.450e-11 Identity = 63/183 (34.43%), Postives = 86/183 (46.99%), Query Frame = 1
Query: 1 LAGVGVRVKKIGPAAVKVYGLGVYVDERGAKSALAKYNKTLYACISW-DEITKHSPGRQIFSPHTRRRLRQMNVKGDGAGQNCFAFALLGRSPLRLCAMSHSACCLFFFALWAG--EYGSTPP-IQFGFACKPGSLCVSINGKAAGTVSSKALSSALQDVYLGAKAVSQGAKDSTADGIAKML 537
LAGVGVRVK+IGP +VKVYG+G+Y+DE A +++Y A + + K S ++I L+ G A ++ R L A+S F L G E GS + F G L V INGK+AG V S +L A D Y+ K VS +DS A+ + L
Sbjct: 40 LAGVGVRVKQIGPLSVKVYGVGMYMDESSALEEISEYAGGKKADSGFFSRLRKPSIDKKIV-------LKMARSVGSETMSEALAESIKPRMSGDLPALSS-----FQTVLLKGLSEDGSAKKGTELAFDASGGKLNVKINGKSAGDVESSSLCDAFVDTYMDDKGVSPTLRDSIAETLCAKL 210
BLAST of mRNA_P-wetherbeei_contig1722.2.1 vs. uniprot
Match: A0A7S4F2D8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F2D8_CHRCT) HSP 1 Score: 63.2 bits (152), Expect = 6.440e-9 Identity = 63/185 (34.05%), Postives = 85/185 (45.95%), Query Frame = 1
Query: 10 VGVRVKKIGPAAVKVYGLGVYVDERGAKSALAKYNKTLYACISWDEITKHSPGRQIFSPHTRRRLRQMNV--KGDGAGQNCFAFALLGRSPLRLCAMSHSACCLFFFAL-------WAGEYGSTPPIQFGFACKPGSLCVSINGKAAGTVSSKALSSALQDVYLGAKAVSQGAKDSTADGIAKML 537
VGV V+K GP +KVYG+G+YVD G+K +L+KY K + E P + F + V G + A AL RL A S + F L +A + + F F + +L V +NGK G V SK L AL + Y AK VSQG +D+ A GI +ML
Sbjct: 43 VGVGVRKKGP--IKVYGVGLYVDSMGSKMSLSKYKK-------YKEDQSALP-KSFFEDLVCGGFGKTLVLKMAYGVTKEKIAGALGDSIKPRLPAGSSRQSVVEFEQLLLDGCEKYAKDGRAGAGTCFTFGVRGSNLGVEVNGKKVGVVHSKPLCQALLNCYFDAKTVSQGLRDTCAQGILEML 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1722.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1722.2.1 >prot_P-wetherbeei_contig1722.2.1 ID=prot_P-wetherbeei_contig1722.2.1|Name=mRNA_P-wetherbeei_contig1722.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=181bp LAGVGVRVKKIGPAAVKVYGLGVYVDERGAKSALAKYNKTLYACISWDEIback to top mRNA from alignment at P-wetherbeei_contig1722:243..1369+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1722.2.1 ID=mRNA_P-wetherbeei_contig1722.2.1|Name=mRNA_P-wetherbeei_contig1722.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1127bp|location=Sequence derived from alignment at P-wetherbeei_contig1722:243..1369+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1722:243..1369+ >mRNA_P-wetherbeei_contig1722.2.1 ID=mRNA_P-wetherbeei_contig1722.2.1|Name=mRNA_P-wetherbeei_contig1722.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig1722:243..1369+ (Phaeothamnion wetherbeei SAG_119_79)back to top |