mRNA_P-wetherbeei_contig1721.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1721.6.1
Unique NamemRNA_P-wetherbeei_contig1721.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: A0A836CH64_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH64_9STRA)

HSP 1 Score: 283 bits (723), Expect = 1.490e-89
Identity = 175/237 (73.84%), Postives = 194/237 (81.86%), Query Frame = 1
Query:    1 EVEDFGAESDGEE---GSGPSMIVQFMAMDGEAKGPQIDMPVSADPIQMEQVLNELLAQKEKLPYSFYIGDEELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPACERLASASKDGSVKVRN 702
            EV DFGAESDGEE     GPSMIVQF +M+GE KGPQID+P+ +   QMEQV+N+LL   E +PY FYIGD E+  +LG  V++ G STE VL V YQPLA+FRVRPVTRCTDTMPGHT+AVLHVSYSPDG +LASGGGD TVRFWDV T  PR TCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP TG   G PL  HKQW+TSL+WEPMH+N ACERLAS+SKDG VKV N
Sbjct:   30 EVPDFGAESDGEEEDVSKGPSMIVQFTSMEGEGKGPQIDIPLGSTVEQMEQVVNKLLGNAEDMPYCFYIGDTEITDSLGGTVQELGTSTENVLTVLYQPLAIFRVRPVTRCTDTMPGHTEAVLHVSYSPDGSQLASGGGDMTVRFWDVNTCTPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGQPIGSPLVSHKQWVTSLSWEPMHKNAACERLASSSKDGLVKVWN 266          
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: D7FYM1_ECTSI (NLE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM1_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 3.400e-78
Identity = 163/245 (66.53%), Postives = 191/245 (77.96%), Query Frame = 1
Query:    4 VEDFGAESD-----------GEEGSGPS-MIVQFMAMDGEAKGPQIDMPVSADPIQMEQVLNELLAQKEKLPYSFYIGDEELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPACERLASASKDGSVKVRN 702
            V DFGA+SD           G+EG  PS MIVQF  ++GE KGPQID+P+ +  +QME+++N+LL  K+K+PY+FY+ D E+   L   V +  +STEAVLRV+YQPLAVFRVRPVTRCT TMPGHT+A   V+YSPDG  LASGGGD TVRFWDV TSLPR TCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP  G   GQPL+ HKQW+TSLAWEP+HRN A ERLAS+SKD  +K+ N
Sbjct:   29 VPDFGADSDDDVEDVARGKGGDEGGTPSSMIVQFATLEGENKGPQIDVPLGSTVLQMEELMNQLLENKDKVPYTFYVNDAEVMETLEQTVSELAVSTEAVLRVSYQPLAVFRVRPVTRCTSTMPGHTEAXXXVNYSPDGTMLASGGGDMTVRFWDVQTSLPRFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGERLASSSKDALIKIWN 273          
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: A0A7S1G396_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G396_9STRA)

HSP 1 Score: 247 bits (630), Expect = 8.820e-75
Identity = 156/224 (69.64%), Postives = 181/224 (80.80%), Query Frame = 1
Query:   34 EEGSGPS-MIVQFMAMDGEAKGPQIDMPVSADPIQMEQVLNELLAQKEKLPYSFYIGDEELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPACERLASASKDGSVKVRN 702
            +E  GPS +IVQF  M+GEA GPQ+D+P+     QME+++NELL   E+ PY+F++ DEEL   L D V  + LSTE VL + YQPL++F+V PV RCTDT+PGHTDAVLHVS+SPDG  LASGGGDATVRFWDV TS P++TCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP TG    +PL GHKQWITSLAWEPMH N ACERLAS+SKD +VKV N
Sbjct:  132 DEPKGPSSLIVQFQTMEGEATGPQLDIPLDTTQGQMEELVNELLENDERTPYAFFVNDEELLAKLRDAVEAQKLSTEVVLPIKYQPLSLFKVLPVARCTDTLPGHTDAVLHVSFSPDGLLLASGGGDATVRFWDVNTSTPKYTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTGKEVCKPLKGHKQWITSLAWEPMHSNGACERLASSSKDKTVKVWN 355          
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: A0A2R5GP19_9STRA (Notchless protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GP19_9STRA)

HSP 1 Score: 234 bits (596), Expect = 3.560e-70
Identity = 143/224 (63.84%), Postives = 183/224 (81.70%), Query Frame = 1
Query:   52 SMIVQFM--AMDGEAKGPQ---IDMPVSADPIQMEQVLNELLAQKEKLPYSFYIGDE--ELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPACERLASASKDGSVKVRN 702
            +M+V+F     +GE  GPQ   +D+P+SA  +Q+E++LNELL + E++P++FY+ +E  E+  +L D V+DR LSTE VL + Y+PL++F+V P+TRCTD++PGHTDA+LHVS+SPDG +LASGGGD TVRFW+V + +PRH C+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP TG A G+PL GH+QWITSLAWEP H NPACERL S SKDG+ +V N
Sbjct:   20 TMVVRFSPATAEGEDAGPQLPPVDVPLSATTLQLERLLNELLEKDERVPFAFYVTEEKSEVVASLKDTVKDRNLSTETVLEINYEPLSLFKVHPMTRCTDSLPGHTDALLHVSFSPDGEQLASGGGDTTVRFWNVASRMPRHVCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATGAAVGKPLTGHRQWITSLAWEPQHANPACERLISGSKDGTARVWN 243          
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: A0A7S3XZG7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZG7_HETAK)

HSP 1 Score: 226 bits (576), Expect = 1.640e-67
Identity = 143/221 (64.71%), Postives = 176/221 (79.64%), Query Frame = 1
Query:   52 SMIVQFMAMDGEAKGPQIDMPVSADPIQMEQVLNELLAQK--EKLPYSFYIGDEELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPA--CERLASASKDGSVKVRN 702
            S+IVQF  ++G+  GP ID+P  + P QME ++N+L+ ++  EK+PYSFY+G+ E+   L   + ++ LSTEAVL V +QPLAVFRVRPV RCTDT+ GHT+AVLHV+++PDG+RLASGGGD  VRFWDV T LP+HT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP +    GQPL GH+QW+TSLAWEP+HR     CERLASASKDG+ K+ N
Sbjct:   54 SVIVQFSDVEGKNTGPNIDIPADSTPEQMEALINQLIQKRDGEKVPYSFYLGENEVTETLAKSIEEQKLSTEAVLTVIFQPLAVFRVRPVARCTDTLVGHTEAVLHVAFAPDGKRLASGGGDGAVRFWDVHTCLPKHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASARPQGQPLTGHRQWVTSLAWEPLHRRRPHPCERLASASKDGTCKIWN 274          
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: A0A6S8C5A1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8C5A1_9STRA)

HSP 1 Score: 226 bits (575), Expect = 2.950e-67
Identity = 138/230 (60.00%), Postives = 174/230 (75.65%), Query Frame = 1
Query:   52 SMIVQFMAMDG--------EAKGPQIDMPVSADPIQMEQVLNELLAQKEKLPYSFYIGDE-----ELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPACERLASASKDGSVKVRN 702
            +M+VQ  +M          E   PQID+P++A P+Q+E+++N+LL+  EK+PY+FY+ D      E+ G+L + + +  L TE VL + +QPL++FRV PVTRCTD++PGHTD++LHVS+SPDG RLASGGGD TVRFW+V T  PRH CR XXXXXXXXXXXXXXXXXXXXXXXXXXXXX P+TG A G+P  GHKQWITSL WEP HRN ACERL S SKD + ++ N
Sbjct:   34 TMVVQLQSMAAATEDEKKPETNLPQIDVPLNATPLQLERLVNQLLSNDEKIPYAFYVRDPNKKQVEIVGSLKETIENNSLGTETVLEIKFQPLSLFRVHPVTRCTDSLPGHTDSLLHVSFSPDGERLASGGGDTTVRFWNVSTRTPRHVCRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPNTGDAIGRPFNGHKQWITSLTWEPHHRNAACERLLSGSKDKTARIWN 263          
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: A0A024UEB3_9STRA (NLE domain-containing protein n=12 Tax=Aphanomyces TaxID=100860 RepID=A0A024UEB3_9STRA)

HSP 1 Score: 223 bits (569), Expect = 9.420e-67
Identity = 141/224 (62.95%), Postives = 175/224 (78.12%), Query Frame = 1
Query:    1 EVEDFGAESDGEEGSG----PSMIVQFMAMDGEAKGPQIDMPVSADPIQMEQVLNELLAQ-KEKLPYSFYIGDEELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPACE 657
            EVE+ G++S+ E+        S+I QF    GE  GPQ+D+PV++  +QME+++N+LLA  K+K+PYSFY+ D E+   L   VRD+  STEA L + +QPLAVFRVRPVTRCTDT+ GH++A+LHV +SPDG+RLASGGGDATVRFWD  T +P+ T RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP TG   G+P+ GH+QW+TSL WEP HRNP CE
Sbjct:   11 EVENDGSDSENEDSDDGVQVASVIAQFKNEQGECVGPQLDIPVASTVLQMEELVNQLLANGKQKVPYSFYLNDTEITDTLAASVRDQNASTEAALTITFQPLAVFRVRPVTRCTDTLQGHSEAILHVRFSPDGKRLASGGGDATVRFWDTNTCMPQFTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTGKQVGEPMKGHRQWVTSLTWEPFHRNPTCE 234          
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: A0A6G0WP21_9STRA (NLE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP21_9STRA)

HSP 1 Score: 219 bits (557), Expect = 5.330e-65
Identity = 136/220 (61.82%), Postives = 173/220 (78.64%), Query Frame = 1
Query:    1 EVEDFGAESDGEEGSGPSMIVQFMAMDGEAKGPQIDMPVSADPIQMEQVLNELLAQ-KEKLPYSFYIGDEELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPACE 657
            + ED  ++SD ++    S+I QF    GE  GPQ+D+PV++   QME+++N+LL    +K+PYSFY+ D E+   L   V+ +  STEAVL + +QPLAVFRVRPVTRCTDT+ GH++A+LHV +SPDG++LASGGGDATVRFWD  T +P+ TCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP TG   G+P+ GH+QW+TS++WEP HRNPACE
Sbjct:   12 DAEDSASDSDNDDVQVASVIAQFKNEQGENVGPQLDIPVASTVTQMEELINQLLDNGNQKVPYSFYLNDVEITDTLVSSVQAQKASTEAVLTITFQPLAVFRVRPVTRCTDTLQGHSEAILHVRFSPDGKKLASGGGDATVRFWDTNTCMPQFTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTTGKQIGEPMKGHRQWVTSISWEPFHRNPACE 231          
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: A0A8K1CSV3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSV3_PYTOL)

HSP 1 Score: 216 bits (551), Expect = 5.200e-64
Identity = 135/219 (61.64%), Postives = 175/219 (79.91%), Query Frame = 1
Query:    7 EDFGAESDGEEGSGPSMIVQFMAMDGEAKGPQIDMPVSADPIQMEQVLNELLAQ--KEKLPYSFYIGDEELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPACE 657
            ED GA+S+ EE S  S+I QF + +G   GPQ+D+P++++  Q+E+++N+LL Q  K ++PY+F++G+ E+  +L   V++  LSTE  L + +QPLAVFRVRPVTRC+DT+ GH++A+LHVS+SPDG+RLASGGGDATVRFWD  TS+P+ TC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G   GQPL  HKQW+ SL+WEPMHRN +CE
Sbjct:   22 EDDGADSEEEEESPMSVITQFQSEEGAVVGPQLDIPLNSNVHQLEELVNQLLEQSGKTRVPYTFFVGETEITSSLQTTVQELNLSTETALTITFQPLAVFRVRPVTRCSDTLQGHSEAILHVSFSPDGKRLASGGGDATVRFWDTNTSMPKQTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGQPIGQPLKAHKQWVNSLSWEPMHRNASCE 240          
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Match: A0A067CTX2_SAPPC (NLE domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CTX2_SAPPC)

HSP 1 Score: 213 bits (543), Expect = 6.520e-63
Identity = 135/219 (61.64%), Postives = 169/219 (77.17%), Query Frame = 1
Query:    7 EDFGAESDGEEGSGPSMIVQFMAMDGEAKGPQIDMPVSADPIQMEQVLNELLAQ-KEKLPYSFYIGDEELAGALGDHVRDRGLSTEAVLRVAYQPLAVFRVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLPRHTCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDTGGATGQPLAGHKQWITSLAWEPMHRNPACER 660
            ED G++ D E+ +  S+I QF    GE  GPQ+D+P+++   QME+++N+LL   K K+PYS +I D E+   L   V  + +STE VL + +QPLAVFRVRPVTRCTDT+ GH +A+LHVS+SPDG++LASGGGDATVRFWD  T +P+HTC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P TG   G+P+ GHKQW+ SL+WEP+HRN  CER
Sbjct:   17 EDSGSDDDDEQVA--SVIAQFKNEQGEPVGPQLDIPLTSTVAQMEELVNQLLQNGKNKVPYSMFINDNEITHNLQASVESQKISTEVVLSITFQPLAVFRVRPVTRCTDTLQGHAEAILHVSFSPDGKKLASGGGDATVRFWDTNTCMPQHTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPATGKQQGEPMKGHKQWVNSLSWEPIHRNATCER 233          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1721.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CH64_9STRA1.490e-8973.84WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
D7FYM1_ECTSI3.400e-7866.53NLE domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1G396_9STRA8.820e-7569.64Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2R5GP19_9STRA3.560e-7063.84Notchless protein-like 1 n=1 Tax=Hondaea fermental... [more]
A0A7S3XZG7_HETAK1.640e-6764.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6S8C5A1_9STRA2.950e-6760.00Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A024UEB3_9STRA9.420e-6762.95NLE domain-containing protein n=12 Tax=Aphanomyces... [more]
A0A6G0WP21_9STRA5.330e-6561.82NLE domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A8K1CSV3_PYTOL5.200e-6461.64Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067CTX2_SAPPC6.520e-6361.64NLE domain-containing protein n=4 Tax=Saprolegniac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1721contigP-wetherbeei_contig1721:5784..6674 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FYM1
Preferred nameNLE1
PFAMsNLE,WD40
Model size738
Max annot lvl2759|Eukaryota
KEGG koko:K07375,ko:K14855
KEGG Pathwayko04145,ko04540,ko05130,map04145,map04540,map05130
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000151,GO:0001501,GO:0001655,GO:0001701,GO:0001756,GO:0001822,GO:0001824,GO:0001825,GO:0001826,GO:0003002,GO:0003674,GO:0003779,GO:0005102,GO:0005112,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005840,GO:0005856,GO:0005884,GO:0005938,GO:0006950,GO:0006970,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007275,GO:0007346,GO:0007389,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0009553,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009892,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010466,GO:0010564,GO:0010605,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010948,GO:0010951,GO:0015629,GO:0016043,GO:0019222,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030029,GO:0030036,GO:0030042,GO:0030111,GO:0030154,GO:0030162,GO:0030177,GO:0030479,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030836,GO:0030837,GO:0030863,GO:0030864,GO:0031323,GO:0031324,GO:0031333,GO:0031461,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032271,GO:0032272,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032535,GO:0032956,GO:0032970,GO:0032984,GO:0032991,GO:0033043,GO:0034622,GO:0035282,GO:0042254,GO:0042255,GO:0042273,GO:0042592,GO:0042641,GO:0042643,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043242,GO:0043243,GO:0043244,GO:0043254,GO:0043281,GO:0043624,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044877,GO:0045786,GO:0045861,GO:0045930,GO:0048229,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048646,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051015,GO:0051016,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051261,GO:0051302,GO:0051336,GO:0051346,GO:0051493,GO:0051494,GO:0051495,GO:0051693,GO:0051716,GO:0051726,GO:0051782,GO:0052547,GO:0052548,GO:0060255,GO:0060429,GO:0060548,GO:0060828,GO:0061053,GO:0061484,GO:0061645,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070925,GO:0071826,GO:0071840,GO:0071944,GO:0072001,GO:0080008,GO:0080090,GO:0090066,GO:0090263,GO:0097435,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0110053,GO:1901879,GO:1901880,GO:1901881,GO:1902494,GO:1902903,GO:1902904,GO:1902905,GO:1990234,GO:1990904,GO:2000116,GO:2000117,GO:2001233,GO:2001234,GO:2001267,GO:2001268
Exons2
Evalue5.58e-79
EggNOG OGsKOG0271@1|root,KOG0271@2759|Eukaryota
Ec32 ortholog descriptionG-protein, beta subunit
Ec32 orthologEc-26_002740.1
Descriptionribosomal large subunit assembly
Cds size738
COG categoryS
BRITEko00000,ko00001,ko03009,ko03036,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186111.1480424-CDS-P-wetherbeei_contig1721:5783..59271683186111.1480424-CDS-P-wetherbeei_contig1721:5783..5927Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1721 5784..5927 +
1683186111.1611192-CDS-P-wetherbeei_contig1721:6080..66741683186111.1611192-CDS-P-wetherbeei_contig1721:6080..6674Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1721 6081..6674 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1721.6.1prot_P-wetherbeei_contig1721.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1721 5784..6674 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1721.6.1

>prot_P-wetherbeei_contig1721.6.1 ID=prot_P-wetherbeei_contig1721.6.1|Name=mRNA_P-wetherbeei_contig1721.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=246bp
EVEDFGAESDGEEGSGPSMIVQFMAMDGEAKGPQIDMPVSADPIQMEQVL
NELLAQKEKLPYSFYIGDEELAGALGDHVRDRGLSTEAVLRVAYQPLAVF
RVRPVTRCTDTMPGHTDAVLHVSYSPDGRRLASGGGDATVRFWDVGTSLP
RHTCRGHKHHVLCTAWSPDGRRFASADKRGEIRLWDPDTGGATGQPLAGH
KQWITSLAWEPMHRNPACERLASASKDGSVKVRNGEAGGGGGGII*
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mRNA from alignment at P-wetherbeei_contig1721:5784..6674+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1721.6.1 ID=mRNA_P-wetherbeei_contig1721.6.1|Name=mRNA_P-wetherbeei_contig1721.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig1721:5784..6674+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGTCGAAGATTTCGGAGCCGAGAGCGATGGGGAGGAAGGGAGCGGGCC GTCGATGATTGTGCAGTTCATGGCGATGGATGGCGAGGCTAAGGGACCGC AGATTGACATGCCCGTCAGCGCCGACCCAATACAGATGGAGCAGGTACGT CTTTTTCGGCACCTTTGCTCTTTTGGTTGTAGAAAAGCCAAAATGTTTTA CGTGCAGGCAGATCTCGTCGTTCTTCTCTTTTACAGTACGAGTTTTCTCG AAACTCGCTCAAAAACCTGCCAAAAAGGACCGCGCCTCGCACCCCAGGTC CTCAACGAGCTGCTGGCGCAAAAGGAAAAGCTACCGTACTCTTTCTACAT CGGGGACGAGGAGCTGGCAGGCGCCCTCGGCGACCACGTCCGTGACCGCG GCCTTTCCACCGAAGCCGTGCTGCGCGTCGCCTACCAGCCGCTGGCCGTA TTCCGCGTGCGGCCCGTCACGCGCTGCACCGACACGATGCCCGGCCACAC CGATGCCGTCCTGCATGTCAGCTACTCGCCCGATGGCCGCCGGCTGGCGT CGGGCGGTGGCGACGCCACCGTTCGCTTCTGGGACGTCGGCACGAGCCTT CCGCGACACACCTGCCGCGGCCACAAACACCATGTGCTATGCACAGCGTG GTCGCCGGACGGGCGGCGGTTCGCATCGGCGGACAAGCGCGGCGAAATTC GGTTGTGGGACCCGGACACGGGGGGGGCGACAGGGCAGCCGCTGGCGGGC CATAAGCAGTGGATCACGAGCCTGGCGTGGGAGCCGATGCACCGGAACCC GGCGTGCGAGCGGCTCGCCAGTGCTTCCAAGGACGGCTCCGTCAAGGTAA GAAATGGCGAGGCGGGGGGGGGGGGGGGGGGTATAATCTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1721:5784..6674+

>mRNA_P-wetherbeei_contig1721.6.1 ID=mRNA_P-wetherbeei_contig1721.6.1|Name=mRNA_P-wetherbeei_contig1721.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=738bp|location=Sequence derived from alignment at P-wetherbeei_contig1721:5784..6674+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGTCGAAGATTTCGGAGCCGAGAGCGATGGGGAGGAAGGGAGCGGGCC
GTCGATGATTGTGCAGTTCATGGCGATGGATGGCGAGGCTAAGGGACCGC
AGATTGACATGCCCGTCAGCGCCGACCCAATACAGATGGAGCAGGTCCTC
AACGAGCTGCTGGCGCAAAAGGAAAAGCTACCGTACTCTTTCTACATCGG
GGACGAGGAGCTGGCAGGCGCCCTCGGCGACCACGTCCGTGACCGCGGCC
TTTCCACCGAAGCCGTGCTGCGCGTCGCCTACCAGCCGCTGGCCGTATTC
CGCGTGCGGCCCGTCACGCGCTGCACCGACACGATGCCCGGCCACACCGA
TGCCGTCCTGCATGTCAGCTACTCGCCCGATGGCCGCCGGCTGGCGTCGG
GCGGTGGCGACGCCACCGTTCGCTTCTGGGACGTCGGCACGAGCCTTCCG
CGACACACCTGCCGCGGCCACAAACACCATGTGCTATGCACAGCGTGGTC
GCCGGACGGGCGGCGGTTCGCATCGGCGGACAAGCGCGGCGAAATTCGGT
TGTGGGACCCGGACACGGGGGGGGCGACAGGGCAGCCGCTGGCGGGCCAT
AAGCAGTGGATCACGAGCCTGGCGTGGGAGCCGATGCACCGGAACCCGGC
GTGCGAGCGGCTCGCCAGTGCTTCCAAGGACGGCTCCGTCAAGGTAAGAA
ATGGCGAGGCGGGGGGGGGGGGGGGGGGTATAATCTAA
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