mRNA_P-wetherbeei_contig172.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig172.3.2
Unique NamemRNA_P-wetherbeei_contig172.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: A0A835YU91_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU91_9STRA)

HSP 1 Score: 625 bits (1611), Expect = 1.340e-203
Identity = 367/862 (42.58%), Postives = 493/862 (57.19%), Query Frame = 1
Query:  352 KRRHSLESYDFNKPDWVNLDMFQSMSAVLRQDLYIYDGPSR-SQSAFFRLWAIVQTPCLVLAVGAITGALGLLVAVSERRLFALRWMWLTVDPAKWWYWVCYALQSMGLALLSCAVTQWFCPSATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGPLVHAACAVAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLVFWATGTLDMFALFSEDTEQATRWEGFDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTRKALGTKMQRRRRFMVVAIFTAIVIPIAYLEMIYYDSEVGLDTRPHALVDQMFMPRSFGLSLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYGLQHINFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYADALHLLHHYKEH--AIIPVVQTRRDMLLVGVILRHDLEVAVEDFEGHILVAKEEPVVLGRAHVRPDTPPXXXXXLGSGISGSFGVFNGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMEWDYPTPPRNQRAHSPRRGGVRRAASGGFSELSPSSEARVVEEHKDTPLQFIIIKDGNKFVPVAGVAPDNGGNGANGGSGNGDTKSFQRRAASGAASIPVVLDPSPYQVMHTTELRKVDLAFRMLKLDVAWVCQAGRLVGLITRGCLRRFIGKRDKRPLDDCRRLCRA 2928
            +R   LESYDF +P+WVNLD+FQS SA+ +QDLY+ +G    +  AF RLW ++QTP L+  V  +    G L+  + R     R   +  +       + YA       + S  +TQ+ CP A GGG+PEMKTVLSG+INP +LS  LV VKL+G+VLA  AGLSVGKEGPL+H +CA+AE++MA P FR +RV    RLE+L CACAAGVAASFGSAFGATLFSVE+T+T Y+V  L R+F  A  V L++W  GT  +  LFS++  Q   +   DLL WA LGV+CGL+G  FV+ +  +S+WRN +TR ALG K+QR RR M+ A+FT +VIP++Y E+ Y+  E    T   ALVD +F PR  G+S  L L+VP+K +  + SVTQPLPVGLF+PVFL+G+A GR+FGE  RY     GL H+ F PWEFAVIG+AA S  +TRAVSTAIIVFE+SGEN LRLPLG+A+L+A+ I +RFTK  Y+SL+D N+ P+LP +PP+A+ ++ E +M+ A  LP L L +TY+ A  LL  +     A+IPVVQT  DM+LVG +LR DLE+AV D+E  + VA++            D  P     L   +                                                                                           + +   +G +  +  GG                    L+F+++K G K  PV                G         R  S   +IP+V+DPSP QV H+TELRK+D  FRMLKLD+A+VC+AG+LVG +TRG +RRF+G R+ +P+D+C  LC +
Sbjct:   14 RRCKRLESYDFFQPEWVNLDLFQSHSALAQQDLYVLEGEHEGAYLAFRRLWRMMQTPVLLCVVACLAACAGYLLDWATRMFIVFRETLVPSNQLDEARPLAYACVCFSFVMASAMLTQFLCPLAAGGGVPEMKTVLSGSINPALLSPLLVVVKLSGLVLAVAAGLSVGKEGPLIHVSCALAELVMAMPAFRYIRVNAPHRLEILTCACAAGVAASFGSAFGATLFSVEITSTCYIVSGLARAFATATVVALIYWCWGTEVISGLFSDNVSQGMPFAPTDLLLWALLGVLCGLVGWAFVSAISGVSQWRNRITRSALGPKVQRGRRLMICALFTTLVIPLSYWELRYF--ERWSTTGQKALVDHLFAPRVLGVSYELALFVPIKALAILLSVTQPLPVGLFAPVFLLGAAFGRLFGEVARYANLSMGLMHLTFQPWEFAVIGAAALSGSITRAVSTAIIVFEMSGENCLRLPLGLAVLIAHTIASRFTKGAYDSLVDTNSAPYLPTLPPQAYLVEVESIMVPAANLPFLSLSTTYSAASRLLRQHTPTTCAVIPVVQTVTDMVLVGAVLRRDLELAVADYEERVAVAEK------------DASPDETARLAEAV-------------------------------------------------------------------------------------------KVNESLQGSLDGSLFGG------------------AHLRFVVVKGGGKVAPVVDTR------------GTAYCMQHMLRLTS-IDTIPIVMDPSPLQVAHSTELRKLDYMFRMLKLDIAFVCRAGKLVGWVTRGTIRRFVGAREPQPIDECIALCES 739          
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: A0A6H5K923_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K923_9PHAE)

HSP 1 Score: 425 bits (1093), Expect = 2.330e-127
Identity = 317/734 (43.19%), Postives = 410/734 (55.86%), Query Frame = 1
Query:  886 VAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLVFWATGTLDMFALFSEDTEQATRWEGFDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTRKALGTKMQRRRRFMVVAIFTAIVIPIAYLEMIYYDSEVGLDTRP--HALVDQMFMPRSFGLSLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYGLQHINFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYADALHLLHHYKEHAIIPVVQTRRDMLLVGVILRHDLEVAVEDFE--GHILVAKEEPVVLGRAHVRPDTPPXXXXXLGSGISGSFGVFNGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMEWDYPTPPRNQRAHSPRRGGVRRAASGGFSELSPSSEARV------------------------------------------VEEHKDTPLQFIIIKDGNKFVPVAGVAPDNGGNGANGGSGNGDTKSFQRRAASGAA-SIPVVLDPSPYQVMHTTELRKVDLAFRMLKLDVAWVCQAGRLVGLITRGCLRRFIGKRDKRPLDDCRRLCRAMQDYCC 2946
            +A++LM+ P F+ VR+   +RL +LACACAAGVAA+FGS FG TLFSVEVTAT YMV+ LP +F+ AV V +VFW +G  ++FAL  ++TEQA  +   DLLAWA LG +CGL+G +FVA +  LS  RN  TRK L    + +R F+VVA+ T +VIP ++ E + + S V    R   H L+D ++    FG+S  L+  + LKF  T+FSV QPLPVGLFSP+F++G  +GR+FGE   +++  +   +I F PWEFA+IGSAAFSAGVTRAVSTA+IVFELSGENHLRLPLGVAL+++Y I NRFTK +Y++L+D N  P L E+PPE   + AE+VMI   ++P L LD T  DA  +    +    IPVVQ+  D +LVG++L +DL +A+ D+   G  + A                  XXXXX               XXXXXXXXXXXXXXXXXXXXXXXXX                                      XXXX                   R  G       G   L P  E                                             +E+ K  P++F ++++G++FVPV G  P  G             K     A   A  SIPVVLDPSPYQV HTTEL KVD+AFR+L+LD A+VC AGRLVG+ITR  L  F+  R+  P+DDC RLC A+   CC
Sbjct:    1 MADILMSTPWFKKVRLNNKQRLGILACACAAGVAATFGSVFGGTLFSVEVTATAYMVDTLPATFLCAVVVAVVFWVSGQGELFALIGDNTEQAQGFTATDLLAWAVLGAVCGLVGAWFVAVLDALSLRRNFFTRKDLDPSTRTKRMFVVVALATLLVIPASFTEDVAF-SNVDRTGRSKYHPLIDSIYDQTQFGMSWRLISLLLLKFWATIFSVVQPLPVGLFSPIFVIGGLMGRIFGEVANWVDHCFDSVNIKFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNKTPHLEEVPPEDQNVPAEDVMIKVDEIPCLSLDCTGRDASEVASRCQPGHFIPVVQSMSDKVLVGIVLWNDLAIALADYRKRGSSITAISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLAEVGGAVGRRMGWFPMVRTAEVSLLQELDRRRAETXXXXXXXXXXXXXXXXXGEGAGKREDGC---GDDGSDSLPPLGEGIPLGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGIEKAKRAPVRFYLVREGHRFVPV-GRNPKKGA-----------WKELPEVAIPTARESIPVVLDPSPYQVSHTTELSKVDIAFRLLRLDNAYVCNAGRLVGVITREALADFVDDREVSPMDDCVRLCGALA--CC 716          
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: W7UA92_9STRA (Chloride channel protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UA92_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 3.430e-123
Identity = 252/564 (44.68%), Postives = 346/564 (61.35%), Query Frame = 1
Query:  397 WVNLDMFQSMSAVLRQDLYIYDGP-SRSQSAFFRLWAIVQTPCLVLAVGAITGALGLLVAVSERRLFALRWMWLTVDPAKWWYWVCYALQSMGLALLS---CAVTQWFCPSATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGPLVHAACAVAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLVFWATGTLDMFALFSEDTEQATRWEGFDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTRKALGTKMQRRRRFMVVAIFTAIVIPIAYLEMIYYDSEVGLDTRPHALVDQMFMPRSFGLSLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYGLQHI-NFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYADALH-LLHHYKEHAIIPVVQTRRDMLLVGVILRHDLEVAV 2070
            W +LD++QS++ V R     ++G  +R  + FF LW +++   L+   G +T  + L+V +S       R++ +     K  + V  ++ ++ +A+LS     VT   CP + GGGIP++KTVLSG I+  +LS RL+  K+ G++ A  AGLSVGKEGP VH A A+++ LM    FR  R  T+KRLE+L CA AAGVA++FG+ FG  LFS+EVTAT YMV  LPR+F  A+   LV+   G  D FALF++D ++   +  FDLL    LG++CGL G  FV  +  L   RN     +LG  +  RRR  +V     +V P+ YL+M+    + G   RP  L D MF     G+S  L LY   KF+ T   V+ PLPVGLF+P F+ G A+GR+FGE + +   +Y    I +  PWEFAVIG+AAFS+GVTRAVSTA+IVFELSG+NHLRLP+ VALLLAY + NRFTK+VY+ L+D N  P LPE+P E + + A +VM    + P L L ST+A+A   LL       +IPVV T   M L G +L  DL+VAV
Sbjct:  143 WQSLDVYQSLAGVTRHPTLAHEGYYNRGANCFFMLWRMMEASILLALTGLLTAVVTLIVNISVFYFAPARYLIVNAMDWKENHLVAASIFTLYVAILSVISALVTNRICPESVGGGIPDVKTVLSGLISTPVLSIRLIWAKMLGLIFALIAGLSVGKEGPFVHVAVAISDSLMRLHCFRHCRRNTSKRLEILGCASAAGVASTFGTPFGGVLFSIEVTATYYMVRNLPRAFFCAICAALVYEIAGLRDTFALFTDDHDRVQGYLVFDLLLCCGLGLLCGLFGALFVGVISALCSLRNRYLSFSLGWPVVARRRVWMVLATALVVAPLIYLDMVSGLPQGG--PRPKPLTDYMFRSGIIGVSGPLALYAVFKFLVTALCVSLPLPVGLFTPTFVTGGAVGRLFGEIVHF---FYPTDRITSLEPWEFAVIGAAAFSSGVTRAVSTAVIVFELSGQNHLRLPISVALLLAYFVANRFTKNVYDELLDTNGTPSLPELPAELYMVTAAQVMRPVDQGPYLTLSSTFAEAEKVLLRCGGSEWLIPVVDTDESMHLQGAVLAEDLKVAV 701          
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: H3H2R1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2R1_PHYRM)

HSP 1 Score: 308 bits (789), Expect = 4.490e-85
Identity = 266/878 (30.30%), Postives = 393/878 (44.76%), Query Frame = 1
Query:  451 YIYDGPSRSQSAFFRLWAIVQTPCLVLAVGAITGALGLLVAVSERRLFALRWMWLTVDPAKWWYW------VCYALQSMGLALLSCAVTQWFCPSATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGPLVHAACAVAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLV--FWATGTLDMFALF-------SEDTEQATRWEG---FDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTR------------KALGTKMQRRRRFMVVAIFTAIVIPIAYLEMIYYDSEVGL-DTRPHALVDQMFMPR----------------SFGLSLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYGLQHINFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYADALHLLHHYKEHAIIPVVQTRRDMLLVGVILRHDLEVAVEDFEGHILVAKEEPVVLGRAHVRPDTPPXXXXXLGSGISGSFGVFNGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMEWDYPTPPRNQRAHSPRRGG----------VRRAASGGFSELSPSSEARVVEEHKD-----------TPLQFIIIKDGNKFVPVAGVAPDNGGNGANGGSGNGDTKSFQRRAASGAASIPVVLDPSPYQVMHTTELRKVDLAFRMLKLDVAWVCQAGRLVGLITRGCLRRFIG 2880
            Y+ D P   +  F     +VQ+P L++++G   G +GL +            MW +V+ A++  W      V + L ++     S  +TQ  CP A G G+P MK  +SG      LS R V  K+ G++ A  AGLS+GKEGP +  +C  A VLM    FR +R    KRLEMLACACAAGVAA+FGS FG  LF VEVT+  Y+V  LPRSF AA+   L+  F A  T   + LF       S DT+      G    DL  +A +GV+CGL G FF   +  L R R+H                ALG ++          +  A+ +   +LE  Y D+   L    P  ++D +F                   S  LS  LV ++PLK+V T+ S+  P+P GLF+P F++G   GR+ GE +R  +    + H ++ P+EFA+IG+ AFS+GVT AVSTA+I+ E+S  + L LP+ VA+L AY    RFT++VY+ LI  + LP L ++P  A+ I A EVM D  ++ VL  DSTY DAL LL       + P+V ++ +  L+  + R  L  AV   + H +     P+ L  A+++  +                                                                                         AS    +PT PR+    + R  G          V RAA G    ++ +      EE +D           TP+ F   + G     V     +                          + + V+++PSP+Q+M  T +R+VD+ FRMLKL+  +V ++G+L+G+I+   +  F+G
Sbjct:  122 YVADYPRGLRGLF----VLVQSPLLLISIGGFAGCVGLAID-----------MW-SVEIAQYRQWLGDQGFVLFVLSALLAGGFSAILTQCVCPQAAGSGLPFMKVAISGIDMSAYLSFRCVATKVVGLMAALGAGLSIGKEGPFIMISCGFASVLMNWRPFRRIRDDDTKRLEMLACACAAGVAATFGSPFGGVLFGVEVTSHFYLVRTLPRSFFAAIVGALLVDFGAANT--RYGLFGNRSMGISADTDAVNGSGGPSFLDLCVFAAMGVVCGLGGAFFNYSLSILVRARDHFFAPSQSQSPRVTWWNALGKRL---------GLVLAVTLLSCWLEF-YGDNAWFLRHGSPRRILDALFSKDKQVFVADGAPESTEEDSLLLSRSLVTFLPLKYVLTLISIVLPVPAGLFTPTFVIGGIFGRLVGEAVRAFD----IMHTHYEPFEFAIIGADAFSSGVTHAVSTAVIIMEISHTDGLNLPVSVAILAAYFTAKRFTENVYDVLIVTSNLPRLKKLPKAAYDIPAWEVMKDVTEMGVLTADSTYEDALALLKRADMEPVFPIVDSQENRFLLATVTRSRLAYAVSRCQRHGVT----PIALTPANLQQPSS----------------------------------------------------------------------------------LEVAATASTSLLFPTTPRSATPTAVRTVGYDSGIRAPTPVVRAAYGAMDSMARTGSEEFDEEEEDDFEAMPMQVLNTPIHFAFGRGGKIMDWVTNEICE-------------------------PSKLTVLINPSPFQLMEMTSMRRVDMLFRMLKLNNVFVARSGKLMGVISLERMMTFLG 856          
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: F0WST7_9STRA (Chloride Channel (ClC) Family putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WST7_9STRA)

HSP 1 Score: 305 bits (780), Expect = 4.150e-84
Identity = 214/629 (34.02%), Postives = 325/629 (51.67%), Query Frame = 1
Query:  346 IGKRRHSLESYDFNKPDWVNLDMFQSMSAVLRQDLYIYDGPSRSQSAFFRLWAIVQTPCLVLAVGAITGALGL-------LVAVSERRLFALRWMWLTVDPAKWWYWVCYALQSMGLALLSCAVTQWFCPSATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGPLVHAACAVAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLVFWATGTLDMFALFSE------DTEQATRWEGFDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTRK-----------------ALGTKMQRRRRFMVVAIFTAIVIPIAYLEMI--YYDSEVGL--DTRPHALVDQMFM--PRSFG-----------------LSLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYGLQHINFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYADALHLLHHYKEHAIIPVVQTRRDMLLVGVILRHDLEVAVE 2073
            +G+R  S E  +  KP ++    F          +Y+ D P     ++  +  I+Q+P L+LA+G  +  +GL       +++  +++LF              W + C+ + ++  A LS AVT   CP + G G+P MK  +SG      LS + V  K+ G+V A  AGLS+GKEGP +  +C  A  L+   LF  V+    KRLEMLACACA GVAA+FGS FG  LF VEVT+  Y+V  LPRSF A++   L+     T   + LF +      D E +  +  +DL  +  +G++CGL G  F  C+  + R R+    +                 A+G  M++ + +  +     IV  I  +  I  +Y           PH ++  +F    + FG                 LS  L+ Y+PLKFV T+ SVT PLP GLF+P F++G   GR+ GE +    T + L    + P+E+A+IG+ AFS+GVT A+STA+I+ E+S  + L LP+ +A+L AY    +FT++VY+ LI  + LP L ++P  A+ I A EVM DAR +  L  DSTY DA  +L    + A+  +V  ++D LL+  ++R  LE AV+
Sbjct:   58 LGQRNKS-EKTNAAKPVFIKAAAFDEEY----HSVYVADNPK----SWLSVLIILQSPLLLLAIGIFSALVGLFIDFWLAMISRYQQKLFE-------------WGFTCFFVSALAAACLSAAVTFVCCPQSAGSGLPYMKVAISGVDMRPYLSWKCVLTKIVGLVAAFAAGLSIGKEGPFIMISCGFASNLLRWALFERVQYDETKRLEMLACACAVGVAATFGSPFGGVLFGVEVTSDFYLVRTLPRSFFASIVGALIVDFATTNARYGLFGKSNLGISDVEISHGFSAYDLGVFVMIGIVCGLGGALFNTCISMIVRRRDKFLNQQFYQNVGIDLATSSYFVAIGRFMRKSKFWQGLLKRLIIVSSITLISCISEFYGDPAWFIHHGAPHRILGALFSRTEKPFGRHGASISGIPLTDSGVQLSRSLLTYLPLKFVLTLLSVTLPLPAGLFTPTFVIGGIFGRLVGEAI----TAFDLLETEYEPFEYAIIGAGAFSSGVTHAISTAVIIMEISHTDSLNLPISLAILAAYFTSKQFTENVYDILIMTSNLPRLKKLPKAAYDIPAWEVMQDARAMEYLTADSTYEDASQVLAS-SDDAVFSIVNNKQDRLLLATVVRDQLENAVD 659          
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: D0P0E4_PHYIT (Chloride Channel (ClC) Family n=14 Tax=Phytophthora TaxID=4783 RepID=D0P0E4_PHYIT)

HSP 1 Score: 302 bits (773), Expect = 6.720e-83
Identity = 218/570 (38.25%), Postives = 306/570 (53.68%), Query Frame = 1
Query:  496 LWAIVQTPCLVLAVGAITGALGLLVAVSERRLFALRWMWLTVDPAKWWYWVCYALQSMGLALLSCAV--------TQWFCPSATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGPLVHAACAVAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLV--FWATGTLDMFALF-------SEDTEQATRWEG---FDLLAWACLGVICGLLGCFFVACVHRLSRWRNHL--------TRKALGTKMQRRRRFMVVAIFTAIVIPIAYLEMIYYDSEVGL-DTRPHALVDQMFMPR----------------SFGLSLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYGLQHINFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYADALHLLHHYKEHAIIPVVQTRRDMLLVGVILRHDLEVAV 2070
            L+ +VQ+P L++A+G   G++GL + V              V+ A++  W+    Q  GL ++S  +        TQ  CP A G G+P M+  +SG      LS R V  K+ G++ A  AGLS+GKEGP +  +C  A VLM    FR +R    KRLEMLACACAAGVAA+FGS FG  LF VEVT+  Y+V  LPRSF AA+   L+  F A  T   + LF       S DT+      G    DL  ++ +GV+CGL G FF   +  L R R+H+         R+A    + +R     + +  A+++   +LE  Y DS   L    P  ++D +F                   S  LS  LV ++PLKFV T+ S+  P+P GLF+P F++G   GR+ GE +R     +GL H ++ P+EFA+IG+ AFS+GVT AVSTA I+ E+S  + L LP+ VA+L AY    RFT++VY+ LI  + LP L ++P  A  I A EVM D  ++ VL  DSTY DAL LL       + P+V +  +  L+  + R  L  AV
Sbjct:  137 LFVLVQSPLLLIAIGIFAGSVGLAIDVWG------------VEIARYHEWL--GDQGFGLFVMSALLAGGFSAILTQCVCPQAAGSGLPFMRVAISGIDMSTYLSLRCVAAKIVGLIAALGAGLSIGKEGPFIMISCGFASVLMNWRPFRRIRDDDTKRLEMLACACAAGVAATFGSPFGGVLFGVEVTSHFYLVRTLPRSFFAAIVGALLVDFGAENT--RYGLFGNRSMGISADTDAVNGSGGATFVDLCIFSLMGVVCGLGGAFFNYSLSILVRARDHIFEASPFAPPRRAWWNALGKR-----LGLVLAVIMLSCWLEF-YGDSAWFLRHGSPRRILDALFSKDKQVFVADGAPDSTEEDSLQLSRSLVTFLPLKFVLTLISIVLPVPAGLFTPTFVIGGIFGRLVGEAVR----AFGLWHTHYEPFEFAIIGAGAFSSGVTHAVSTAAIIMEISHTDGLNLPVSVAILAAYFTAKRFTENVYDVLIVTSHLPRLKKLPKAACDIPAWEVMKDVAEMGVLSADSTYEDALALLKGSDMEPVFPIVDSLENRFLLATVTRSRLAYAV 680          
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: M4BDD4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDD4_HYAAE)

HSP 1 Score: 298 bits (763), Expect = 5.170e-82
Identity = 208/581 (35.80%), Postives = 306/581 (52.67%), Query Frame = 1
Query:  448 LYIYDGPSRSQSAFFRLWAIVQTPCLVLAVGAITGALGLLVAVSERRLFALRWMWLTVDPAKWWYWV------CYALQSMGLALLSCAVTQWFCPSATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGPLVHAACAVAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLVFWATGTLDMFALFSEDT------EQATRWEG----FDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTRKALGTK--------MQRRRRFMVVAIFTAIVIPIAYLEMIYYDSEVGLDTRPHALVDQMFMP----------------RSFGLSLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYGLQHINFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYADALHLLHHYKEHAIIPVVQTRRDMLLVGVILRHDLEVAV 2070
            +Y+ D P   +  F     +VQ+P L++A+G   G++GL+V            MW +V+ A+++ WV       +   ++     S  +TQ  CP A G G+P MK  +SG      LS R V  K+ G++ A  AGLS+GKEGPLV  +C  A VLM+   F  +R   AKRLEMLACACAAGV+A+FGS FG  LF VEVT+  Y+V  LPRSF AA+   L+         + LF   +        A +  G     DL  +A +G++CGL G FF   +  L R R+   + +L +         + +R     + +  A+ +   +LE     +   L   P  ++D++F                   S  LS  L+ ++PLK V T+ S+  P+P GLF+P F++G   GR+ GET+R  +        ++ P+EFA+IG+ AFS+GVT A+STA+++ E+S  + L LP+ VA L AY    RFT++VY+ LI  + LP L ++P  A+ I A EVM D  ++ VL  DSTY DAL LL       + PVV +  +  L+  + R  L  AV
Sbjct:   71 VYVADYPRGLRGLF----VLVQSPLLLVAIGIFAGSVGLVVD-----------MW-SVEIARYYEWVGDHGFGLFVASALFAGGFSALLTQCVCPQAAGSGLPFMKVAISGINMSVYLSFRCVATKIVGLMAALAAGLSIGKEGPLVMISCGFASVLMSWSPFHRIRDDDAKRLEMLACACAAGVSATFGSPFGGVLFGVEVTSHFYLVRTLPRSFFAAIVGALIVGFGAANSRYGLFGNRSIAINADTNAVKGSGDLVCADLCLFALMGMVCGLAGAFFNYTLSILVRARDRFFQPSLSSSPRVTWWNALGKR-----LGLVLAVTLLSCWLEFYGDSAWFMLHGSPRRILDELFSKDKRIFASDSARKSTTEESLLLSRSLLTFLPLKCVLTLISILLPVPAGLFTPTFVIGGIFGRLVGETVRAFD----FMSTSYEPFEFAIIGAGAFSSGVTHAISTAVMIMEISHTDGLNLPVSVATLAAYFTAKRFTENVYDVLIVTSNLPRLKKLPKAAYDISAWEVMKDVVEMGVLSADSTYEDALVLLQRSDMELVFPVVDSLENRFLLATVTRSWLADAV 626          
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: G5ACT7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5ACT7_PHYSP)

HSP 1 Score: 299 bits (765), Expect = 8.970e-82
Identity = 218/587 (37.14%), Postives = 307/587 (52.30%), Query Frame = 1
Query:  451 YIYDGPSRSQSAFFRLWAIVQTPCLVLAVGAITGALGLLVAVSERRLFALRWMWLTVDPAKWWYWV------CYALQSMGLALLSCAVTQWFCPSATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGPLVHAACAVAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLV--FWATGTLDMFALF-------SEDTEQATRWEG---FDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTR------------KALGTKMQRRRRFMVVAIFTAIVIPIAYLEMIYYDSEVGL-DTRPHALVDQMFMPR----------------SFGLSLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYGLQHINFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYADALHLLHHYKEHAIIPVVQTRRDMLLVGVILRHDLEVAV 2070
            Y+ D P   +  F     +VQ+P L++A+G   G++GL + V           W +V+ A++  W+       + L ++     S  +TQ  CP A G G+P MK  +SG      LS R +  K+ G++ A  AGLS+GKEGP +  +C  A VLM    FR +R    KRLEMLACACAAGVAA+FGS FG  LF VEVT+  Y+V  LPRSF AA+   L+  F A  T   + LF       S DT+      G    DL  +A +G++CGL G FF   +  L R R+                KALG ++          +  A+ +   +LE  Y DS   L    P  ++D +F                   S  LS  LV ++PLK+V T+ S+  P+P GLF+P F++G   GR+ GE +R  +    L    + P+EFA+IG+ AFS+GVT AVSTA+I+ E+S  + L LP+ VA+L AY    RFT++VY+ LI  + LP L ++P  A+ I A EVM D  ++ VL  DSTYADAL LL       + P+V +  +  L+  + R  L  AV
Sbjct:  132 YVADYPRGLRGLF----VLVQSPLLLIAIGIFAGSVGLAMDV-----------W-SVEIARYHQWLGDQGFMLFVLSALLAGGFSAILTQCVCPQAAGSGLPFMKVAISGIDMSAYLSFRCIATKIVGLMAALGAGLSIGKEGPFIMISCGFASVLMNWRPFRRIRDDDTKRLEMLACACAAGVAATFGSPFGGVLFGVEVTSHFYLVRTLPRSFFAAIVGALLVDFGAANT--RYGLFGNRSMGISSDTDAVNGSGGPSFVDLSVFATMGIVCGLGGAFFNHTLSILVRARDRFFEPSPSRTPRAGWWKALGKRL---------GLVLAVTLLSCWLEF-YGDSAWFLRHGSPRKILDALFSKDKQVFVADGTPENVEEDSLLLSRSLVTFLPLKYVLTLISIVLPVPAGLFTPTFVIGGIFGRLVGEAVRAFD----LLSTRYEPFEFAIIGAGAFSSGVTHAVSTAVIIMEISHTDGLNLPVSVAILAAYFTAKRFTENVYDVLIVTSNLPRLKKLPKAAYDIPAWEVMKDVAEMGVLTADSTYADALALLKRSDMEPVFPIVDSLENRFLLATVTRSRLAYAV 686          
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: A0A7S3NNS7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNS7_9STRA)

HSP 1 Score: 298 bits (764), Expect = 7.260e-81
Identity = 210/596 (35.23%), Postives = 303/596 (50.84%), Query Frame = 1
Query:  397 WVNLDMFQSMSAVLRQDLYIYDGPSRSQSAFFRLWAIVQTPCLVLAVGAITGALGLLV--AVSERRLFALRWMWLTVDPAKWWYWVCYALQSMGLALLSCAVTQWFCPSATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGPLVHAACAVAEVLMAQ-PLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLVFWATGTLDMFALFSEDTE--------------QATRWEGFDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTRKALGTK--------------------------MQRR-------RRFMVVAIFTAIVIPIAYLEMIYYDSEVGL----DTRPHA--LVDQMFM--PRSFGLSLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYG-------LQHIN------------FAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYA 1953
            W ++D+FQ+  +   + L           +  + W   +   L+  VG  T  L +L   A SE   F L   +      ++ Y +   L ++G A    +VT + CP A G GIPEMKTVLSG +   +L+ R +  K+ G+ L+  AGLSVGKEGP +H ACA+AE+ M +  +FR+V +  AKRL++L  ACA GVAASFG+ FG  +FS+E+TA+TY +  LP++    +   L   + G   + ++F  DT               +   W   DL A+  LG +CGLLGC FV  V  L+  RN    K   T                           M R        R+ ++V   T +V P+     ++ D   GL    +  P+A  ++D +F   P +      +  +VP KFV T+ SV  PLPVG+F P F+ G+AIGR  GE L  L   Y        L  ++            F PWE+AVIG+AAF+AGVTRA+STA+I  EL+GENHLR+PL ++ L+A+ IGNRFTK +Y++LID N  P LP++P   + +    VM     +  L   S +A
Sbjct:    4 WHDVDVFQTYRSKHHRYLEFTSDQVEETESKSKCWQFARVSVLLAFVGVGTACLTVLTDTACSELNFFLLESYFGINKKRRFPYILFCVLCAVGAA----SVTHFLCPGAAGSGIPEMKTVLSGVVKSSLLTPRALLAKIIGLTLSLGAGLSVGKEGPNIHIACALAEICMQKFRIFRAVAINQAKRLDILGAACATGVAASFGTPFGGAIFSIEITASTYNIHMLPQALWCCLAGALALQSAGLDSLTSIFDPDTNFDPNYVHTTQTHNLKKENWTRLDLFAFVLLGALCGLLGCIFVWLVSSLAARRNEFLAKIPDTSEILTKNDHNPIIKNFLPKKMYTCFFSMYRALYFTHLGRKLLLVVSATLLVAPL-----VFEDLMTGLAATAEESPNADNVLDVLFAKTPMNTDERTKVFWFVPYKFVTTIISVVLPLPVGVFKPTFVCGAAIGRAIGEVLHSLAANYADRKWIDSLTDVDNTAHSTMPIITQFMPWEYAVIGAAAFAAGVTRALSTAVIFLELAGENHLRIPLLLSTLVAHFIGNRFTKPIYDALIDTNGTPTLPDLPERCYYLPVRAVMCSVAPISHLFAVSDHA 590          
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Match: A0A1V9ZBT7_9STRA (Chloride Channel (ClC) Family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBT7_9STRA)

HSP 1 Score: 294 bits (752), Expect = 1.970e-80
Identity = 188/487 (38.60%), Postives = 272/487 (55.85%), Query Frame = 1
Query:  652 YALQSMGLALLSCAVTQWFCPSATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGPLVHAACAVAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGATLFSVEVTATTYMVECLPRSFMAAVTVVLVFWATGTLDMFALFSE-------DTEQATRWEGFDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTRKALGTKMQRRRRFMVVAIFTAIVIPIAYLEMIYYDSEVGLDT-RPHALVDQMFMP---RSFGLSL--HLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLETYYGLQHINFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPLGVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDARKLPVLGLDSTYADALHLLHHYKEHAIIPVVQTRRDMLLVGVILRHDLEVAVE 2073
            + L S+    L   +  +  P A G G+P+MK  LSG      LS R + VK+ G+V A  A LS+GKEGP +  +C  AE LM   +FR +   +AKRLEMLACACAAGVAA+FG+ FG  LF+VEVT++ YMV  LPRSF AA+   +      T   + LF         +T+    +   D+  +  +GV+CG+LG  F+  +  L R R+     + G  +  +R  +VV     +V  IA +   Y D    L    P  +++ +F     R  G  L   L+ + PLK++ TM  V  PLP G+F+P F++G   GR+ GE ++  E        NF P+EFA+IG+AAFS GVTRA+STA+I+ E+S   +L +P+ +A+L AY  G RF ++VY+ LI  + LP L ++P  A+ I + EVM     + VL  D+TY  A  LL   K+  + P+V T R M L+G + R  L+ A+E
Sbjct:  214 FLLFSLAAGCLGSLLVHFVSPEAAGSGLPQMKVALSGVDMTEYLSARCLVVKMAGLVTAYAAALSIGKEGPFIMISCCFAECLMQMDIFRRIHDDSAKRLEMLACACAAGVAATFGTPFGGVLFAVEVTSSFYMVRNLPRSFFAALAGSITISFLMTNGKYGLFDRSAGLGLTETDFTREFTSVDMCIFVFIGVVCGILGAVFIFVISMLVRARDRWFLSSRGPPLLYKRLGIVV-----LVTLIANIFDFYGDPAWFLHHGSPQTIINTLFTKAPSREEGADLARSLITFFPLKYILTMICVVVPLPAGVFTPTFVIGGIFGRMIGEAIQVTEVVA----TNFEPFEFAIIGAAAFSTGVTRAISTAVIIMEVSHNGYLTIPVSIAILAAYFTGGRFIENVYDVLITTSRLPRLQKLPKAAYDIPSWEVMKTVDAMAVLSADATYRRAEELLALSKD-PVFPIVDTLRSMHLIGAVTRTRLQQAIE 690          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig172.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YU91_9STRA1.340e-20342.58Chloride channel n=1 Tax=Tribonema minus TaxID=303... [more]
A0A6H5K923_9PHAE2.330e-12743.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7UA92_9STRA3.430e-12344.68Chloride channel protein n=2 Tax=Monodopsidaceae T... [more]
H3H2R1_PHYRM4.490e-8530.30Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
F0WST7_9STRA4.150e-8434.02Chloride Channel (ClC) Family putative n=1 Tax=Alb... [more]
D0P0E4_PHYIT6.720e-8338.25Chloride Channel (ClC) Family n=14 Tax=Phytophthor... [more]
M4BDD4_HYAAE5.170e-8235.80Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
G5ACT7_PHYSP8.970e-8237.14Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A7S3NNS7_9STRA7.260e-8135.23Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1V9ZBT7_9STRA1.970e-8038.60Chloride Channel (ClC) Family n=1 Tax=Achlya hypog... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig172contigP-wetherbeei_contig172:2319..8593 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog164328.Phyra84693
PFAMsVoltage_CLC
Model size4132
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons8
Evalue6.34e-88
EggNOG OGsCOG0038@1|root,KOG0476@2759|Eukaryota,3QES0@4776|Peronosporales
DescriptionVoltage gated chloride channel
Cds size2913
COG categoryP
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig172.3.2prot_P-wetherbeei_contig172.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig172 3424..8479 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186110.6249597-UTR-P-wetherbeei_contig172:2318..34231683186110.6249597-UTR-P-wetherbeei_contig172:2318..3423Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig172 2319..3423 -
1683186110.728069-UTR-P-wetherbeei_contig172:8479..85931683186110.728069-UTR-P-wetherbeei_contig172:8479..8593Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig172 8480..8593 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186110.6369736-CDS-P-wetherbeei_contig172:3423..37021683186110.6369736-CDS-P-wetherbeei_contig172:3423..3702Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig172 3424..3702 -
1683186110.6470308-CDS-P-wetherbeei_contig172:3897..47461683186110.6470308-CDS-P-wetherbeei_contig172:3897..4746Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig172 3898..4746 -
1683186110.6570153-CDS-P-wetherbeei_contig172:5024..53191683186110.6570153-CDS-P-wetherbeei_contig172:5024..5319Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig172 5025..5319 -
1683186110.6665425-CDS-P-wetherbeei_contig172:5571..58091683186110.6665425-CDS-P-wetherbeei_contig172:5571..5809Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig172 5572..5809 -
1683186110.679694-CDS-P-wetherbeei_contig172:6398..68551683186110.679694-CDS-P-wetherbeei_contig172:6398..6855Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig172 6399..6855 -
1683186110.6995757-CDS-P-wetherbeei_contig172:7037..73081683186110.6995757-CDS-P-wetherbeei_contig172:7037..7308Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig172 7038..7308 -
1683186110.7111504-CDS-P-wetherbeei_contig172:7679..79571683186110.7111504-CDS-P-wetherbeei_contig172:7679..7957Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig172 7680..7957 -
1683186110.718873-CDS-P-wetherbeei_contig172:8233..84791683186110.718873-CDS-P-wetherbeei_contig172:8233..8479Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig172 8234..8479 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig172.3.2

>prot_P-wetherbeei_contig172.3.2 ID=prot_P-wetherbeei_contig172.3.2|Name=mRNA_P-wetherbeei_contig172.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=971bp
MRRERERLLPPSMLQSDGGTFVPAHGGIIDSLEGGSANSATSSRCASPFS
SAPGLPQQPPNIVVGNRMRSWSGGRHHIGKRRHSLESYDFNKPDWVNLDM
FQSMSAVLRQDLYIYDGPSRSQSAFFRLWAIVQTPCLVLAVGAITGALGL
LVAVSERRLFALRWMWLTVDPAKWWYWVCYALQSMGLALLSCAVTQWFCP
SATGGGIPEMKTVLSGAINPGILSTRLVTVKLTGMVLAKTAGLSVGKEGP
LVHAACAVAEVLMAQPLFRSVRVATAKRLEMLACACAAGVAASFGSAFGA
TLFSVEVTATTYMVECLPRSFMAAVTVVLVFWATGTLDMFALFSEDTEQA
TRWEGFDLLAWACLGVICGLLGCFFVACVHRLSRWRNHLTRKALGTKMQR
RRRFMVVAIFTAIVIPIAYLEMIYYDSEVGLDTRPHALVDQMFMPRSFGL
SLHLVLYVPLKFVQTMFSVTQPLPVGLFSPVFLMGSAIGRVFGETLRYLE
TYYGLQHINFAPWEFAVIGSAAFSAGVTRAVSTAIIVFELSGENHLRLPL
GVALLLAYMIGNRFTKDVYESLIDVNTLPWLPEMPPEAFTIQAEEVMIDA
RKLPVLGLDSTYADALHLLHHYKEHAIIPVVQTRRDMLLVGVILRHDLEV
AVEDFEGHILVAKEEPVVLGRAHVRPDTPPTPPTPLGSGISGSFGVFNGN
GNGHHHDGAVGPGDRSAGTGGGGKGGGWPLEYSPRQAAARRQRDNGKGVG
GGRGGGGGGAGSASSGAASMEWDYPTPPRNQRAHSPRRGGVRRAASGGFS
ELSPSSEARVVEEHKDTPLQFIIIKDGNKFVPVAGVAPDNGGNGANGGSG
NGDTKSFQRRAASGAASIPVVLDPSPYQVMHTTELRKVDLAFRMLKLDVA
WVCQAGRLVGLITRGCLRRFIGKRDKRPLDDCRRLCRAMQDYCCFEYETE
VVGVENYTAESLEDYQPAPV*
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mRNA from alignment at P-wetherbeei_contig172:2319..8593-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig172.3.2 ID=mRNA_P-wetherbeei_contig172.3.2|Name=mRNA_P-wetherbeei_contig172.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=6275bp|location=Sequence derived from alignment at P-wetherbeei_contig172:2319..8593- (Phaeothamnion wetherbeei SAG_119_79)
TTCCGTTGGTCCGCACCCTCGCATTCAGCGCCTCCCATCATCCGCTGCTC TTTACTTTTAATCCGTTGTGCATAAATCGACGGCTGTGTCTACTTTCGCA ACCAGTGGAAAGCTATGAGGAGGGAAAGAGAAAGACTTCTTCCCCCTTCG ATGTTGCAGAGCGATGGCGGGACCTTCGTCCCGGCACACGGCGGCATCAT TGACTCTCTGGAGGGTGGCAGCGCCAACTCTGCCACGAGCAGCCGATGCG CATCGCCATTCTCCTCTGCCCCCGGACTTCCGCAGCAGCCGCCTAACATT GTGGTCGGCAACCGCATGCGGAGTTGGTCGGGAGGCCGACATCATATCGG CAAAAGAAGGGTGAACGAGCCTTCTCCCTTTGTTTCATTTGGTACCCCGC TTCCGAGTTGCTGTACTCTGCTTTGACTTCTTACCCCCAATCCAACTTTT CTGCTGCCACGCTTGCGACTGTGTCCCCACACTTTGCCAACGCCTCCATT CGCTTCTTGTGACACCCAAAGACTCTGAAACCACCGAGCGTGGGCCCAAC TTAGATCCCGCGCCCTCACCGCTTACTGCGGCCAACCATCCTTCGCCTGG CACCCCTATACTTCCCTTCCCGCCAAAACACAGCAGCACTCGCTGGAGAG CTACGACTTCAATAAGCCGGACTGGGTGAACCTGGACATGTTTCAGAGCA TGTCCGCCGTCCTCCGCCAAGACCTCTACATCTATGATGGACCCTCGCGG AGCCAGTCGGCCTTCTTCCGGCTCTGGGCCATCGTCCAGACGCCGTGCCT CGTCCTCGCCGTCGGCGCCATCACCGGCGCGTTGGGGCTGCTCGTCGCCG TCAGCGAGCGACGCCTGTTTGCGCTGCGCTGGATGTGGCTGACGGTCGAC CCGGCCAAGTGGTGGTGAGTCGGAAGAAGAAAAAAGATAAAAGAGAAGGA GAGGGAAGGGTTTTACTCTCCTTCTTTACTTGGAGCAGCACGGATCATCT GTGCTTAGATCAGCATCGATCTTATGTAGAAGTGGCCACATCCGTTGGCC AACATCGCTGAGATTGGTCCGTGAAATGATTTTGCCTGTAAGGGGCTAAA GGCGAGACAGAACTGGTGCTTTAAATTTTACTGCCAGCCTTTGAAAGAAA GGAAGGGCCTCTTCGAAACCGTATCGGGAAGAACCGCCCCCTCTTTCTGT ATTCGATTTTGGTACAGTGAGTCCGAAATCACATTATTTCGTCTTCTAAC AGATCACATCCTTACGTCCCCGTCGCACGCAACAGGTACTGGGTGTGCTA CGCGCTGCAGTCGATGGGCCTTGCCCTCCTCAGCTGCGCCGTCACGCAGT GGTTCTGCCCCTCGGCCACTGGTGGCGGCATCCCTGAAATGAAGACGGTA CTGTCGGGCGCCATCAATCCCGGAATCCTGTCGACGCGGCTGGTGACGGT CAAGCTGACGGGCATGGTGCTCGCTAAGACAGCGGGCTTGAGCGTCGGGA AGGAGGGCCCGCTGGTGCACGCCGCTTGCGCTGTTGCCGAGGTGCTCATG GCACAGGTGAGCAAATTAGAGGAATTTCCGGGAATATTCTGGAGGTGCTT TACTCTTCTTAAGTGCGGTGTTTTCGCTCTCACTGGCTCTTTCTCTCTGT AGGCAATCGGAGACTGAAGCCTTTCTCCTTTGCCCAATTCTTTCCTTTTT CTTTATGCCCCTCCGCAACTTCCCCGCTCCCCCCACAGCCGCTGTTCCGG AGCGTCCGCGTTGCGACGGCGAAGCGGCTGGAGATGCTCGCCTGCGCCTG CGCCGCCGGCGTCGCCGCCTCGTTTGGCTCGGCCTTCGGCGCCACCCTCT TCTCCGTCGAGGTCACCGCCACCACCTACATGGTGGAGTGCCTCCCGCGC TCCTTCATGGCCGCCGTGACGGTGGTTCTGGTCTTTTGGGCGACCGGAAC GCTCGACATGTTTGCCCTGTTCTCAGAGGACACGGAGCAGGCGACGCGCT GGGAGGGCTTTGATTTGCTGGCGTGGGCGTGCCTCGGCGTGATTTGCGGG CTGCTTGGCTGCTTCTTCGTGGCATGCGTCCACCGCTTGAGCCGGTGGCG TAACCATCTGACGCGCAAAGCGCTGGGCACGAAGATGCAGCGGCGGCGGC GGTTCATGGTGGTGGCCATCTTCACTGCCATCGTCATTCCCATCGGTGTG TAGACTGTTTGGTGGAGAGAGAAGGGTTGGAGTTTGTGTTGGGTGGGAGG GACTGGTTTTCTTGATGCCGCTTCGCCGGTACGTTTGAAGTTTGCAATGA TTTGCTGCCATGAAAAGTCGTGCGTCGGGAAAGCTGTGGAGGACTGGCAT GTGGCGAATGGTCCTCTGTAGGATGAGAATTGGCTGGGCTGTCTTGGTAG TAGAGGAAAGGGCATTTTTCACCGTACCGTAGGCTGGAGTTTTGACTTTG ACGAGTGCAGTTCTTGCAATGTGCACACCTCTTTAACGCTTACCCGATTT CCCTTTCGGCTGCGTGCTCTGCGAAGTATTGATTGTAAAGCCGATTCATC GTTCTGAGACTGTGAGGCTTGCGTTTCTGACCTTCGGTTTTCCAATTCGC TTCCCTTATCTCTTTCCTTGGACGACGCCCTCTTCTGCCGGCTTCTCCGT TCTAGTTATCCCGATCCTCCCTTCTTCCTCCTGGCCTTTACCACAATTTT CCCCGGGCCCATCCCTTTAAATTCTGCGTAACAATGCGGAAATGTCATAT ATCTTATTGCTTCTTCCCTTCTTTCTCCCGGCAGCGTACCTGGAGATGAT CTACTACGACAGCGAAGTCGGCCTCGACACGCGGCCGCACGCCCTCGTGG ACCAGATGTTTATGCCGCGCAGCTTCGGCCTGTCGCTCCACCTGGTGCTC TACGTGCCACTCAAGTTCGTGCAGACCATGTTCTCCGTCACGCAGCCGCT GCCGGTGGGGCTGTTCAGCCCTGTGTTTTTGATGGGGAGCGCGATTGGCC GCGTCTTCGGGGAGACGCTTAGGTAAGATAAACAGGAGGGGAAGGAGGGT GGGGTGGAAAAGGAGGGCGCCAGGCACTGTACATACGGATGTCCTAGCAG GCTGTTGTTGACGCAGCTAGGAAGTGTCAGCTGCCGGCAAGCATGGCGCG TCCGGGACCGAGCCTTGCCCCGCAACTGCTGTACCAGCAAGCCAAAAAAG ATGCCGTTTGCCATTCTTCTCGTTCCTCCTCCTCCTTTCCCTCCCTGGCT TTGTTGCCTTGTTCATATTAAAAGGTATCTGGAGACATACTACGGGCTGC AGCACATCAACTTCGCCCCCTGGGAGTTCGCCGTCATCGGCTCAGCCGCC TTCAGCGCCGGCGTCACCCGCGCAGTCTCAACGGCCATCATTGTCTTCGA ACTCTCTGGAGAGAACCACCTGCGGCTGCCGCTGGGCGTGGCGCTGCTGC TGGCGTACATGATCGGGAATAGATTCACGAAAGACGTGTACGAGTCGCTG ATTGACGTCAACACGCTGCCATGGCTGCCGGAGATGCCGCCAGAGGCCTT CACCATCCAGGCAGAGGAGGTGAGTCGTATTTCTGGTGGCAGAAGTGAAG TTCTTCTATTTTTTAAAGGTTCCGTTCTTAACGAGAACGGGCGATCAGAG GGATGCTGGTGTGCTGTTTTCCCACTGCTCTCTGCAAATGAATGTATACC GGTTCTTGTCGGAACGAAAAAAACCGTCGTACCGCCATTTCAACACCTCA AATGGAAGACCCGAGCACCTTGATTTGGAGTCCGTTCCAGAGTTTCTCTT CTCGTTTCCTTTGGAAACTCCCTTCAATCATGAATGAACTCCCCCAGGTG ATGATTGATGCACGCAAGCTGCCGGTGCTGGGCCTCGACTCCACCTACGC CGACGCCCTCCACCTGCTGCACCACTACAAGGAGCACGCCATCATCCCCG TCGTGCAGACGCGCCGCGACATGCTTCTGGTCGGCGTCATTCTCCGCCAT GATTTGGAAGTCGCCGTCGAGGACTTTGAGGGCCACATCTTGGTAGCGAA GGAGGAGCCGGTGGTGCTGGGGCGGGCGCACGTGCGGCCAGACACGCCGC CGACGCCGCCGACGCCGCTGGGGTCGGGGATCTCTGGCAGTTTCGGCGTT TTCAACGGCAACGGCAACGGGCATCATCACGACGGCGCGGTCGGGCCCGG GGACCGGAGCGCCGGCACCGGCGGCGGGGGTAAGGGTGGGGGGTGGCCAC TGGAGTACTCACCACGGCAGGCGGCGGCGCGGCGGCAGCGGGACAATGGG AAGGGCGTCGGTGGCGGCCGTGGCGGCGGCGGCGGTGGCGCGGGCAGTGC CAGCAGCGGGGCTGCTAGCATGGAGTGGGACTACCCGACGCCGCCGCGAA ACCAGCGGGCGCACTCGCCGCGGCGCGGCGGCGTGCGGCGGGCGGCGTCG GGCGGCTTTTCGGAGCTGTCGCCGTCGTCGGAAGCGCGGGTTGTGGAAGA GCACAAAGATACGCCGCTGCAGTTCATCATCATCAAGGACGGCAACAAGT TCGTACCGGTGGCGGGGGTGGCGCCGGATAACGGCGGGAATGGCGCGAAC GGCGGCAGCGGCAATGGGGATACAAAAAGTTTCCAGCGACGTGCTGCATC CGGGGCAGCGTCCATCCCCGTGGTGCTCGATCCGTCGCCATATCAGGTAG CTTTTTAAAAGCTTTTGAGAGGGCGGCTAGTTGGCCAAAAACAACGTCGT TTTGGGCGCATTAATTGTACAGTCTCTGTTTCGGGCTCTCGCTCTTTCAC AAACGCCGTTTTGACCTCGTGTCCGCTTTTGGTATCACCGGAAACTCTGC CGGAACTACCCGTTTCCAACCCGACTGATTAACCCCCACAGGTGATGCAC ACAACGGAGTTGCGCAAGGTGGATTTGGCCTTCCGCATGCTCAAGCTGGA CGTGGCGTGGGTTTGCCAGGCGGGCCGCCTCGTGGGGCTCATCACGCGCG GCTGCCTGCGGCGCTTCATCGGCAAGCGTGACAAGCGGCCTCTGGATGAC TGCCGGCGCCTGTGCCGCGCCATGCAGGACTACTGCTGCTTCGAATACGA GACGGAGGTGGTCGGCGTTGAAAACTACACGGCCGAGTCGCTCGAAGACT ATCAACCCGCCCCCGTCTGAGGCCTTTTTTTGCGGCGGTTACGGCGCCAG TTGCGGCGCGGTTGCGGAAGTTTCGGCTGCGGCGGTACCGGCAGCCGCGG CCGGCAGTCGCGTCAGTGATCGGCGGTTTCAGTAGCTGCGGCTCGGGGCG ACAGCATCGGCGGCAGCGGGGGCGGCGATAGCGGCGGTAGCGGCGAATGG CTGCGGCAACGGCGGTGGAGCGCGGCATCTGCAGTGACGGCGGCCTCTAG GCGCTGCCGCCGTTGCCGTCGACGCCATTGCCGTTGACGCCGTTGGATGC CTTGTCGTAGTGATGCGCTGAAGGAACTTGGCTTCCGACAGCGCAATGAC CACTGGGCGCCGCCAACATTGCAAGACTTCAGCGGCTTTGGGTTTGCAGC GGGAGCGGCAGGCGGGTTTGCCGTCTCTCGTGGCCCTTTCCTGCCTTGAG GAAAGGGGCTGGTGGAGGGGATGCCGGGGGGCCGCCAAAGCGGTGCAGCG TGGGGCAGCACCACGATGAAGCGGGTGCTCCCATGCGACGAGACGCCACG CGCGGCGAGCCGTTGCGGTAAAAGAGAAGAGCGGAGCCGCCGAGGCGGAG TCACGCCCGCATCGGCGGCGGCTTGCTGTTCTTTTAAAGTGTTGGGAATG GCTTCAGCGGGCGCCGCGGAGATCCGGTCGATCTCTTTGCGGTTGCTGCA GGTGGCGAAGGAGCGTCGGGCTTGCCATAGAGGCTAGCCCAAGCTTTCAC TCCGTTTGCATTGCCGGGCGGGTTAGGAGGGGGGCGGGATCGGAAGGATC GGGTGGCGTGTGCATGTTTCCACAGTGCATGGTTTGACTGGCTTTGGAGT TGGGATTTGGAAAGATGAGGCGGGCTTTGTAACGCTTGGCTCTGGCGTTG TCCGCTGTTTATCTGGGAGCTTTCCGGCGCCGTTAGGATTCCGCCTTACG GCCTTTTTCAGCCGGCTTTCTGGGCATTCTCCTTCTTTCACAAAGGCCCA GACGAGTAGTAGCGGCGGCAGAGACGGCCAATCGTCGTTTACGGATGACG CTTTTGAAAAGTAGGCTTGGATTTCCGTGTAGCGACCGACGACACAGCAC AAATGACCAAAAAACGCATCGTCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig172:2319..8593-

>mRNA_P-wetherbeei_contig172.3.2 ID=mRNA_P-wetherbeei_contig172.3.2|Name=mRNA_P-wetherbeei_contig172.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2913bp|location=Sequence derived from alignment at P-wetherbeei_contig172:2319..8593- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGGAGGGAAAGAGAAAGACTTCTTCCCCCTTCGATGTTGCAGAGCGA
TGGCGGGACCTTCGTCCCGGCACACGGCGGCATCATTGACTCTCTGGAGG
GTGGCAGCGCCAACTCTGCCACGAGCAGCCGATGCGCATCGCCATTCTCC
TCTGCCCCCGGACTTCCGCAGCAGCCGCCTAACATTGTGGTCGGCAACCG
CATGCGGAGTTGGTCGGGAGGCCGACATCATATCGGCAAAAGAAGGCACT
CGCTGGAGAGCTACGACTTCAATAAGCCGGACTGGGTGAACCTGGACATG
TTTCAGAGCATGTCCGCCGTCCTCCGCCAAGACCTCTACATCTATGATGG
ACCCTCGCGGAGCCAGTCGGCCTTCTTCCGGCTCTGGGCCATCGTCCAGA
CGCCGTGCCTCGTCCTCGCCGTCGGCGCCATCACCGGCGCGTTGGGGCTG
CTCGTCGCCGTCAGCGAGCGACGCCTGTTTGCGCTGCGCTGGATGTGGCT
GACGGTCGACCCGGCCAAGTGGTGGTACTGGGTGTGCTACGCGCTGCAGT
CGATGGGCCTTGCCCTCCTCAGCTGCGCCGTCACGCAGTGGTTCTGCCCC
TCGGCCACTGGTGGCGGCATCCCTGAAATGAAGACGGTACTGTCGGGCGC
CATCAATCCCGGAATCCTGTCGACGCGGCTGGTGACGGTCAAGCTGACGG
GCATGGTGCTCGCTAAGACAGCGGGCTTGAGCGTCGGGAAGGAGGGCCCG
CTGGTGCACGCCGCTTGCGCTGTTGCCGAGGTGCTCATGGCACAGCCGCT
GTTCCGGAGCGTCCGCGTTGCGACGGCGAAGCGGCTGGAGATGCTCGCCT
GCGCCTGCGCCGCCGGCGTCGCCGCCTCGTTTGGCTCGGCCTTCGGCGCC
ACCCTCTTCTCCGTCGAGGTCACCGCCACCACCTACATGGTGGAGTGCCT
CCCGCGCTCCTTCATGGCCGCCGTGACGGTGGTTCTGGTCTTTTGGGCGA
CCGGAACGCTCGACATGTTTGCCCTGTTCTCAGAGGACACGGAGCAGGCG
ACGCGCTGGGAGGGCTTTGATTTGCTGGCGTGGGCGTGCCTCGGCGTGAT
TTGCGGGCTGCTTGGCTGCTTCTTCGTGGCATGCGTCCACCGCTTGAGCC
GGTGGCGTAACCATCTGACGCGCAAAGCGCTGGGCACGAAGATGCAGCGG
CGGCGGCGGTTCATGGTGGTGGCCATCTTCACTGCCATCGTCATTCCCAT
CGCGTACCTGGAGATGATCTACTACGACAGCGAAGTCGGCCTCGACACGC
GGCCGCACGCCCTCGTGGACCAGATGTTTATGCCGCGCAGCTTCGGCCTG
TCGCTCCACCTGGTGCTCTACGTGCCACTCAAGTTCGTGCAGACCATGTT
CTCCGTCACGCAGCCGCTGCCGGTGGGGCTGTTCAGCCCTGTGTTTTTGA
TGGGGAGCGCGATTGGCCGCGTCTTCGGGGAGACGCTTAGGTATCTGGAG
ACATACTACGGGCTGCAGCACATCAACTTCGCCCCCTGGGAGTTCGCCGT
CATCGGCTCAGCCGCCTTCAGCGCCGGCGTCACCCGCGCAGTCTCAACGG
CCATCATTGTCTTCGAACTCTCTGGAGAGAACCACCTGCGGCTGCCGCTG
GGCGTGGCGCTGCTGCTGGCGTACATGATCGGGAATAGATTCACGAAAGA
CGTGTACGAGTCGCTGATTGACGTCAACACGCTGCCATGGCTGCCGGAGA
TGCCGCCAGAGGCCTTCACCATCCAGGCAGAGGAGGTGATGATTGATGCA
CGCAAGCTGCCGGTGCTGGGCCTCGACTCCACCTACGCCGACGCCCTCCA
CCTGCTGCACCACTACAAGGAGCACGCCATCATCCCCGTCGTGCAGACGC
GCCGCGACATGCTTCTGGTCGGCGTCATTCTCCGCCATGATTTGGAAGTC
GCCGTCGAGGACTTTGAGGGCCACATCTTGGTAGCGAAGGAGGAGCCGGT
GGTGCTGGGGCGGGCGCACGTGCGGCCAGACACGCCGCCGACGCCGCCGA
CGCCGCTGGGGTCGGGGATCTCTGGCAGTTTCGGCGTTTTCAACGGCAAC
GGCAACGGGCATCATCACGACGGCGCGGTCGGGCCCGGGGACCGGAGCGC
CGGCACCGGCGGCGGGGGTAAGGGTGGGGGGTGGCCACTGGAGTACTCAC
CACGGCAGGCGGCGGCGCGGCGGCAGCGGGACAATGGGAAGGGCGTCGGT
GGCGGCCGTGGCGGCGGCGGCGGTGGCGCGGGCAGTGCCAGCAGCGGGGC
TGCTAGCATGGAGTGGGACTACCCGACGCCGCCGCGAAACCAGCGGGCGC
ACTCGCCGCGGCGCGGCGGCGTGCGGCGGGCGGCGTCGGGCGGCTTTTCG
GAGCTGTCGCCGTCGTCGGAAGCGCGGGTTGTGGAAGAGCACAAAGATAC
GCCGCTGCAGTTCATCATCATCAAGGACGGCAACAAGTTCGTACCGGTGG
CGGGGGTGGCGCCGGATAACGGCGGGAATGGCGCGAACGGCGGCAGCGGC
AATGGGGATACAAAAAGTTTCCAGCGACGTGCTGCATCCGGGGCAGCGTC
CATCCCCGTGGTGCTCGATCCGTCGCCATATCAGGTGATGCACACAACGG
AGTTGCGCAAGGTGGATTTGGCCTTCCGCATGCTCAAGCTGGACGTGGCG
TGGGTTTGCCAGGCGGGCCGCCTCGTGGGGCTCATCACGCGCGGCTGCCT
GCGGCGCTTCATCGGCAAGCGTGACAAGCGGCCTCTGGATGACTGCCGGC
GCCTGTGCCGCGCCATGCAGGACTACTGCTGCTTCGAATACGAGACGGAG
GTGGTCGGCGTTGAAAACTACACGGCCGAGTCGCTCGAAGACTATCAACC
CGCCCCCGTCTGA
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