mRNA_P-wetherbeei_contig17197.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: D8LBP0_ECTSI (Expressed protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP0_ECTSI) HSP 1 Score: 115 bits (289), Expect = 2.370e-28 Identity = 63/98 (64.29%), Postives = 71/98 (72.45%), Query Frame = 1
Query: 1 ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRGDVAPGVWFPEEAFAAPAPRRQLLEEATRGAFLWERE 294
ITD+LVGATNAMR+EAV + DG AVL YAH+DLE CVGIATAAF A LRGDV PGVWFPEEAF A R L ++ATRGAF+WER+
Sbjct: 381 ITDKLVGATNAMRLEAVAK--------DGR---KAVLNYAHEDLEVCVGIATAAFVVATLRGDVRPGVWFPEEAFDDEAKRGLLFDDATRGAFMWERQ 467
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: A0A835YY64_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY64_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.050e-27 Identity = 58/96 (60.42%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 1 ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRGDVAPGVWFPEEAFAAPAPRRQLLEEATRGAFLWE 288
+TD LVG+ NAM+V A + DGS AV+ YAHKDLEECVGIATAAFA A LRGD+ G+W+PEEA A R +LL EATRGAFLWE
Sbjct: 121 LTDMLVGSANAMKVTATAK-DGS----------TAVMTYAHKDLEECVGIATAAFAAAALRGDIKTGIWYPEEALRDEAARERLLAEATRGAFLWE 205
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: A0A4D9D814_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D814_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.240e-18 Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 1 ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRGDVAPGVWFPEEAFAAPAPRRQLLEEATRGAFLWEREGG 300
+ D LVG NAMRV A +R G +A A+ YAH+DLE CVG AAFA +L G VAPGVW+PEEAFA+ RR + + AT+G WER G
Sbjct: 331 LVDTLVGTANAMRVTATSKR--------GTESATAL--YAHEDLETCVGEGIAAFAAQVLDGKVAPGVWYPEEAFASLEGRRDVFQLATKGCSTWERPAG 420
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: A0A7S4QKN8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QKN8_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.720e-17 Identity = 49/96 (51.04%), Postives = 59/96 (61.46%), Query Frame = 1
Query: 1 ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRGDVAPGVWFPEEAFAAPAPRRQLLEEATRGAFLWE 288
+ D+LVGATNAMRV+A R DG V +R AH DLE+CVG+ATAAFA +LRG V PGVWFP E PR +L A AF++E
Sbjct: 242 LVDKLVGATNAMRVDATAR--------DGEVV---TMRIAHPDLEQCVGLATAAFALEVLRGTVPPGVWFPAE--LPEEPRSNILLAAKEDAFVYE 324
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: A0A7S4BYK7_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BYK7_CHRCT) HSP 1 Score: 77.8 bits (190), Expect = 2.440e-16 Identity = 46/96 (47.92%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 1 ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRGDVAPGVWFPEEAFAAPAPRRQLLEEATRGAFLWE 288
+ D+LVGATNAMRV+A R D +G LR AH DLE+CVG+ATAAFA L R V GVW+P E R +L+ GAF+WE
Sbjct: 38 LVDKLVGATNAMRVDAT-RTDETG------KKRTVTLRVAHDDLEQCVGLATAAFALELFRKTVPAGVWYPAE--LQSKARSSILDRVKEGAFVWE 124
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: A0A7S2N2T9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N2T9_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.180e-15 Identity = 46/96 (47.92%), Postives = 59/96 (61.46%), Query Frame = 1
Query: 1 ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRGDVAPGVWFPEEAFAAPAPRRQLLEEATRGAFLWE 288
+ D+LVGATNAMRV+A + DG V ++ AH DLE+CVG+ATAAFA ++RG V PGVWFP E PR +L A AF++E
Sbjct: 322 LVDKLVGATNAMRVDATAQ--------DGEVI---TMKIAHPDLEQCVGLATAAFAVEVMRGTVPPGVWFPAE--LPDEPRSNILLTAKEDAFVYE 404
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: A0A7S2GAF4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GAF4_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 3.490e-15 Identity = 50/110 (45.45%), Postives = 58/110 (52.73%), Query Frame = 1
Query: 1 ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRG----------DVAPGVWFPEEAFAAPA-PRRQLLEEATRGAFLWEREG 297
+ DRLVGATNAMRV+A A LR AH DLE+CVG+ATAAF +LRG V PGVW+P E PA R +L A GAF+WE G
Sbjct: 54 LVDRLVGATNAMRVDAWS-----------ASGEQVTLRCAHPDLEQCVGLATAAFGMEILRGRTGEGGSGDTTVQPGVWYPAE---LPANARSNILAAAREGAFIWEMGG 149
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: A0A1Q9CF78_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CF78_SYMMI) HSP 1 Score: 76.6 bits (187), Expect = 3.570e-14 Identity = 44/94 (46.81%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 7 DRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRGDVAPGVWFPEEAFAAPAPRRQLLEEATRGAFLWE 288
DRLVGATNAMRV+A RRD LR H DLE+CVG+ATAAF +L+G V PG WFP E A R ++ + G+ WE
Sbjct: 3262 DRLVGATNAMRVDA--RRDSG---------EAVTLRITHSDLEDCVGLATAAFGLEVLQGQVPPGAWFPAE---MAANRARIFQRVRHGSINWE 3341
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: A0A2D6FCK6_9CYAN (Sacchrp_dh_NADP domain-containing protein n=1 Tax=Cyanobium sp. ARS6 TaxID=2024869 RepID=A0A2D6FCK6_9CYAN) HSP 1 Score: 74.3 bits (181), Expect = 1.870e-13 Identity = 46/105 (43.81%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 1 ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRG---------DVAPGVWFPEEAFAAPAPRRQLLEEATRGAFLWE 288
+ D+LVGATNAMRV+AV + D G + LR H DLE+CVG ATAAFA +LRG ++ GVW+P E A R +LE A A +WE
Sbjct: 304 LVDKLVGATNAMRVDAVSKADAGSG-----MPLKVTLRCVHADLEDCVGQATAAFAMEMLRGRAGASSAERTISAGVWYPVELQAKA--RTNILEVARENALVWE 401
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Match: A0A163YDL2_9SYNE (Putative trans-acting enoyl reductasec n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A163YDL2_9SYNE) HSP 1 Score: 73.9 bits (180), Expect = 2.520e-13 Identity = 46/105 (43.81%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 1 ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIATAAFATALLRG---------DVAPGVWFPEEAFAAPAPRRQLLEEATRGAFLWE 288
+ D+LVGATNAMRV+AV + G D + A LR H DLE+CVG ATAAFA +LRG + GVW+P E A R +L+ + A LWE
Sbjct: 296 VVDKLVGATNAMRVDAVSK-----GNCDSGLPAKVTLRCVHADLEDCVGQATAAFAIEMLRGRPGLSSAEQTIPAGVWYPAELQAKA--RNNILQVVSEKALLWE 393 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17197.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17197.1.1 >prot_P-wetherbeei_contig17197.1.1 ID=prot_P-wetherbeei_contig17197.1.1|Name=mRNA_P-wetherbeei_contig17197.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp ITDRLVGATNAMRVEAVPRRDGSGGGGDGAVAAPAVLRYAHKDLEECVGIback to top mRNA from alignment at P-wetherbeei_contig17197:1151..1450- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17197.1.1 ID=mRNA_P-wetherbeei_contig17197.1.1|Name=mRNA_P-wetherbeei_contig17197.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig17197:1151..1450- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17197:1151..1450- >mRNA_P-wetherbeei_contig17197.1.1 ID=mRNA_P-wetherbeei_contig17197.1.1|Name=mRNA_P-wetherbeei_contig17197.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig17197:1151..1450- (Phaeothamnion wetherbeei SAG_119_79)back to top |