mRNA_P-wetherbeei_contig1719.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A6H5JX30_9PHAE (Citrate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX30_9PHAE) HSP 1 Score: 472 bits (1214), Expect = 6.590e-156 Identity = 222/259 (85.71%), Postives = 243/259 (93.82%), Query Frame = 2
Query: 602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
I +MPEVAALIYRCKFKDG + KD S DY+GN+C+M+GY+D +F +LMR+YLVIHSDHEGGNASAHATHLVGSTLSD Y+SYAAG+ ALAGPLHGLANQEVLGWIKDL+A FKAKGKEV+ +TIEEFAWETLNSGKVIPGYGHAVLRKTDPRY AQR+FALKHLPDD+LFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSG LLCHY+F E+DYYTVLFGVSRGIGALSQLFWDRALGLPLERPKS+TPE+LWE A K
Sbjct: 202 IAKMPEVAALIYRCKFKDGVVKKDLSLDYTGNYCSMMGYNDKSFQDLMRLYLVIHSDHEGGNASAHATHLVGSTLSDAYMSYAAGIGALAGPLHGLANQEVLGWIKDLEAHFKAKGKEVSHETIEEFAWETLNSGKVIPGYGHAVLRKTDPRYMAQRQFALKHLPDDDLFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGVLLCHYDFTEHDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSVTPEWLWEHAKK 460
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A835YLV9_9STRA (Citrate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV9_9STRA) HSP 1 Score: 450 bits (1157), Expect = 2.150e-147 Identity = 213/257 (82.88%), Postives = 230/257 (89.49%), Query Frame = 2
Query: 608 QMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
++PE+AALIYRC++ DG++ KD S DYSGNFC MLG+ DP F ELMR+Y+VIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGL ALAGPLHGLANQEVLGWI LQA+FK GK VNK TIEEF TLNSGKVIPGYGHAVLRKTDPRY AQR+FALKHLPDD LF IVST+YEVVPGVLTKLGKVKNPWPNVDAHSG LLCHY F ++DYYTVLFGVSR +GALSQLFWDRALGLPLERPKS+TPEFLW ATK
Sbjct: 201 RLPEIAALIYRCRYADGQVKKDLSLDYSGNFCRMLGFTDPTFDELMRLYMVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLCALAGPLHGLANQEVLGWILQLQAEFKKAGKPVNKDTIEEFTLATLNSGKVIPGYGHAVLRKTDPRYEAQRQFALKHLPDDPLFHIVSTVYEVVPGVLTKLGKVKNPWPNVDAHSGVLLCHYGFTQHDYYTVLFGVSRAMGALSQLFWDRALGLPLERPKSVTPEFLWSQATK 457
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A7S1UKD8_9STRA (Citrate synthase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKD8_9STRA) HSP 1 Score: 419 bits (1077), Expect = 3.660e-135 Identity = 199/259 (76.83%), Postives = 223/259 (86.10%), Query Frame = 2
Query: 602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
+ ++P +AALIYRC +KDG L+ D S DYSGNF MLGYD+P F ELMR+Y+ IHSDHEGGNASAH THLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVL WI+ L+ F AKG E N +TI EFAW TLNSGKVIPGYGHAVLRKTDPRYT QREFALK++PDD LFKIV TIY+V+PGVLT+ GK KNPWPNVD+HSG LL HY F E YYTVLFGVSR +GAL+Q+FWDRALGLPLERPKS+TPE+L EFA+K
Sbjct: 219 VAKLPVIAALIYRCSYKDGNLTMDKSLDYSGNFSRMLGYDNPDFDELMRLYICIHSDHEGGNASAHTTHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLRWIQALKEDFDAKGIEPNPETITEFAWSTLNSGKVIPGYGHAVLRKTDPRYTCQREFALKYMPDDPLFKIVDTIYDVMPGVLTEHGKTKNPWPNVDSHSGVLLWHYGFTEYQYYTVLFGVSRAMGALAQVFWDRALGLPLERPKSVTPEWLKEFASK 477
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A6T2F9S7_9EUGL (Citrate synthase n=4 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T2F9S7_9EUGL) HSP 1 Score: 418 bits (1074), Expect = 8.150e-135 Identity = 194/262 (74.05%), Postives = 229/262 (87.40%), Query Frame = 2
Query: 602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFA--TKK 1381
I ++P++A+L+YRC + DGK+ +D SD+SGNFC MLGY+DP+F ELMR+Y+VIHSDHEGGNASAHAT L GSTLSDPYL+Y GL+ALAGPLHGLANQEVL WI++LQA+FKA+G+ V +TI EFAW+TL SGK+IPGYGHAVLRKTDPRYT QREF LKH+PDDELFKIV TIY+V+PG+LT+ GK KNP+PNVD+HSG LL HY F + DYYTVLFGVSR +GALSQLFWDRALGLPLERPKSLTPE++ FA TKK
Sbjct: 210 ISKLPKIASLVYRCTYHDGKIVEDRGSDFSGNFCRMLGYNDPSFDELMRLYMVIHSDHEGGNASAHATRLCGSTLSDPYLAYVGGLSALAGPLHGLANQEVLRWIQELQAKFKAEGRAVTAETITEFAWDTLKSGKIIPGYGHAVLRKTDPRYTCQREFGLKHMPDDELFKIVDTIYQVMPGILTEHGKTKNPYPNVDSHSGVLLWHYGFTQYDYYTVLFGVSRAMGALSQLFWDRALGLPLERPKSLTPEWIENFAKNTKK 471
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A1Z5KSV8_FISSO (Citrate synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSV8_FISSO) HSP 1 Score: 415 bits (1067), Expect = 7.650e-134 Identity = 193/259 (74.52%), Postives = 224/259 (86.49%), Query Frame = 2
Query: 602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
+ Q+PE+AA IYR + DG + KD S DYSGNFC MLGYDDP+F ELMR+YL IH+DHEGGNASAHATHLVGSTLSDPYLSY+ GLNALAGPLHGLANQEVL WI++L+++F A+GKEVN ++I EFAWETL +GKVIPGYGHAVLRKTDPRYT QREFALKH+PDD LFK+V TIY+V+PG+L + GKV NP+PNVD+HSG LL HY F + YYTVLFGVSR +GALSQL+WDRALGLPLERPKS+TPE+LW K
Sbjct: 208 VAQLPEIAATIYRNVYFDGTVDKDLSLDYSGNFCRMLGYDDPSFDELMRLYLCIHTDHEGGNASAHATHLVGSTLSDPYLSYSGGLNALAGPLHGLANQEVLKWIQELKSKFDAEGKEVNAESITEFAWETLKAGKVIPGYGHAVLRKTDPRYTCQREFALKHIPDDPLFKLVDTIYQVMPGILKEHGKVANPYPNVDSHSGVLLWHYGFTQYQYYTVLFGVSRAVGALSQLYWDRALGLPLERPKSVTPEWLWSQVQK 466
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A7S2CEC0_9STRA (Citrate synthase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CEC0_9STRA) HSP 1 Score: 413 bits (1062), Expect = 4.860e-133 Identity = 192/251 (76.49%), Postives = 222/251 (88.45%), Query Frame = 2
Query: 608 QMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFL 1360
++PE+AA+IYR + DG ++KD S DYSGNFC MLGYD+ F ELMR+YL IHSDHEGGNASAHATHL+GSTL+DPY+SYA GLNALAGPLHGLANQEVLGWI++L +FK++GKEV K+ I EF WETLNSG+VIPGYGHAVLRKTDPRYT QREFALKH+PDDELFK+VSTIYEVVP +L + GK NP+PNVD+HSG LL HYNF +NDYYTVLFGVSR +GALSQLFWDRALGLPLERPKS+T E++
Sbjct: 214 KVPEIAAIIYRNVYFDGVVNKDHSLDYSGNFCRMLGYDNEGFDELMRLYLTIHSDHEGGNASAHATHLIGSTLADPYISYAGGLNALAGPLHGLANQEVLGWIQELDRKFKSEGKEVTKENITEFTWETLNSGQVIPGYGHAVLRKTDPRYTCQREFALKHMPDDELFKLVSTIYEVVPDILLEHGKAANPYPNVDSHSGVLLWHYNFTQNDYYTVLFGVSRAMGALSQLFWDRALGLPLERPKSVTSEWI 464
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A7S4J631_9STRA (Citrate synthase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J631_9STRA) HSP 1 Score: 410 bits (1053), Expect = 1.180e-131 Identity = 192/259 (74.13%), Postives = 223/259 (86.10%), Query Frame = 2
Query: 602 IDQMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
I ++PE+AA+IYR + DG ++KD + DYSGNFC MLGYD+P+F ELMR+YL IH+DHEGGNASAH THLVGSTL+DPYLSYAAGLNALAGPLHGLANQEVL WI+ L +F A+GKEVN +TI EFAWETLN+ KVIPGYGHAVLRKTDPRYT QREFALKHLPDDELFK+V TIY+V+PG+LT+ GKV NP+PNVD+HSG LL HY F + YYTVLFGVSR +G L QL+WDRALGLPLERPKS+TP++LW K
Sbjct: 214 IAKIPEIAAVIYRNVYFDGVVNKDHTLDYSGNFCRMLGYDNPSFDELMRLYLCIHTDHEGGNASAHTTHLVGSTLADPYLSYAAGLNALAGPLHGLANQEVLKWIQALSDRFAAEGKEVNAETITEFAWETLNAKKVIPGYGHAVLRKTDPRYTCQREFALKHLPDDELFKVVDTIYQVMPGILTEHGKVSNPYPNVDSHSGVLLWHYGFTQFQYYTVLFGVSRAVGGLCQLYWDRALGLPLERPKSVTPDWLWSQVKK 472
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A482RUQ9_9ARCH (Citrate synthase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUQ9_9ARCH) HSP 1 Score: 402 bits (1032), Expect = 1.540e-131 Identity = 192/261 (73.56%), Postives = 221/261 (84.67%), Query Frame = 2
Query: 602 IDQMPEVAALIYRCKFKDGKLSKDASS--DYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFLWEFATK 1378
I ++PE+AAL+YRC +KDG L KD + DYS +F MLGY+DP F ELMR+YLVIHSDHEGGNASAH THLVGSTL+DPYLS+AAGLNALAGPLHGLANQEVLGWI LQ +F+ +GK V K+TI EFAWETL +GKVIPGYGHAVLRKTDPRY QR+FALKHLP D LF+IVSTIYEV+PGVLT+ GK KNP+PNVD+HSG LL HY E YYTVLFGVSR +GALSQ+FWDRAL LPLERPKS+TPE++ ++ K
Sbjct: 5 IAKLPEIAALVYRCSYKDGMLVKDTTGKLDYSASFNRMLGYNDPKFDELMRLYLVIHSDHEGGNASAHTTHLVGSTLADPYLSFAAGLNALAGPLHGLANQEVLGWILALQKKFQQEGKAVTKETITEFAWETLKAGKVIPGYGHAVLRKTDPRYECQRQFALKHLPSDPLFQIVSTIYEVMPGVLTEHGKTKNPYPNVDSHSGVLLWHYGLREYQYYTVLFGVSRAMGALSQVFWDRALALPLERPKSVTPEYIVDYFKK 265
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A7S3Q5G2_9STRA (Citrate synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5G2_9STRA) HSP 1 Score: 408 bits (1049), Expect = 3.460e-131 Identity = 189/250 (75.60%), Postives = 221/250 (88.40%), Query Frame = 2
Query: 611 MPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFL 1360
+PE+AA IYR + DG ++KD S DYSGNFC MLGYD+P+F ELMR+YL IH+DHEGGNASAHATHLVGSTLSDPYL+YA GLNALAGPLHGLANQEVL WI++L ++F ++GKEVN +TI EFAW+TLN+GKVIPGYGHAVLRKTDPRYT QREFALKH+PDDELFK+V TIY V+PG+LT+ GK NP+PNVD+HSG LL HY F + YYTVLFGVSR +GALSQL+WDRALGLPLERPKS+TPE++
Sbjct: 208 LPEIAAQIYRNVYFDGVVTKDHSLDYSGNFCRMLGYDNPSFDELMRLYLCIHTDHEGGNASAHATHLVGSTLSDPYLAYAGGLNALAGPLHGLANQEVLKWIQELNSKFGSEGKEVNAETITEFAWDTLNAGKVIPGYGHAVLRKTDPRYTCQREFALKHMPDDELFKVVDTIYSVMPGILTEHGKTANPYPNVDSHSGVLLWHYGFTQYQYYTVLFGVSRAVGALSQLYWDRALGLPLERPKSVTPEWI 457
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Match: A0A6U3QNZ0_9STRA (Citrate synthase n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3QNZ0_9STRA) HSP 1 Score: 408 bits (1048), Expect = 5.380e-131 Identity = 190/251 (75.70%), Postives = 221/251 (88.05%), Query Frame = 2
Query: 608 QMPEVAALIYRCKFKDGKLSKDASSDYSGNFCAMLGYDDPAFAELMRIYLVIHSDHEGGNASAHATHLVGSTLSDPYLSYAAGLNALAGPLHGLANQEVLGWIKDLQAQFKAKGKEVNKQTIEEFAWETLNSGKVIPGYGHAVLRKTDPRYTAQREFALKHLPDDELFKIVSTIYEVVPGVLTKLGKVKNPWPNVDAHSGALLCHYNFMENDYYTVLFGVSRGIGALSQLFWDRALGLPLERPKSLTPEFL 1360
++PE+AA IYR + DG ++KD S DYSGNFC MLGY+DP+F ELMR+YL IH+DHEGGNASAH THLVGSTL+DPYLSY+AGLNALAGPLHGLANQEVL WI++L A+F ++GKEVN +TI EFAWETLN+ KVIPGYGHAVLRKTDPRYT QREFALKHLPDDELFK+V TIY+V+PG+LT+ GKV NP+PNVD+HSG LL HY F + YYTVLFGVSR +G L QL+WDRALGLPLERPKS+TPE+L
Sbjct: 211 KIPEIAATIYRNVYFDGVVTKDQSLDYSGNFCRMLGYNDPSFDELMRLYLCIHTDHEGGNASAHTTHLVGSTLADPYLSYSAGLNALAGPLHGLANQEVLKWIQELSARFASEGKEVNAETITEFAWETLNAKKVIPGYGHAVLRKTDPRYTCQREFALKHLPDDELFKVVDTIYQVMPGILTEHGKVSNPYPNVDSHSGVLLWHYGFTQFQYYTVLFGVSRAVGGLCQLYWDRALGLPLERPKSVTPEWL 461 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1719.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1719.4.2 >prot_P-wetherbeei_contig1719.4.2 ID=prot_P-wetherbeei_contig1719.4.2|Name=mRNA_P-wetherbeei_contig1719.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=340bp MMTAAAAVIAWTNYDYDGGDDCGGNDGCGDGLAAARRRLDGAWRRRVKRRback to top mRNA from alignment at P-wetherbeei_contig1719:3110..6342- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1719.4.2 ID=mRNA_P-wetherbeei_contig1719.4.2|Name=mRNA_P-wetherbeei_contig1719.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3233bp|location=Sequence derived from alignment at P-wetherbeei_contig1719:3110..6342- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1719:3110..6342- >mRNA_P-wetherbeei_contig1719.4.2 ID=mRNA_P-wetherbeei_contig1719.4.2|Name=mRNA_P-wetherbeei_contig1719.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1020bp|location=Sequence derived from alignment at P-wetherbeei_contig1719:3110..6342- (Phaeothamnion wetherbeei SAG_119_79)back to top |