mRNA_P-wetherbeei_contig17100.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: A0A7S1TXV3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXV3_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.070e-53 Identity = 87/147 (59.18%), Postives = 101/147 (68.71%), Query Frame = 1
Query: 67 IAGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDRVGADYSEGIFLQSVYPTFGIGGEAAHG---AHGKAAAGRGMSTQGLGRYAFDPESHLTETSELATDEARTRLFNEWGFFW---DLKKPFLLEKSPPNMMISRFLQRLFTAP 489
+ HT LFVGGPHRGGTT+LWK LR HP + GF D+VGAD SEGIF+Q+VYP FGIG E G G A + T+GLGRY F+P++H+TE S L E R LFN+W +FW D K LEKSPPNMMISRFLQ LFT P
Sbjct: 78 VGNHTLLFVGGPHRGGTTILWKKLREHPEIAGFGDKVGADMSEGIFMQTVYPQFGIGAEINAGRMQGRGTIKANGDLDTRGLGRYMFNPDAHITEDSNLVNAENRMDLFNQWSYFWPVHDASKRVFLEKSPPNMMISRFLQALFTVP 224
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: A0A7S1XMW6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMW6_9STRA) HSP 1 Score: 178 bits (451), Expect = 7.910e-52 Identity = 87/147 (59.18%), Postives = 101/147 (68.71%), Query Frame = 1
Query: 67 IAGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDRVGADYSEGIFLQSVYPTFGIGGEAAHG---AHGKAAAGRGMSTQGLGRYAFDPESHLTETSELATDEARTRLFNEWGFFW---DLKKPFLLEKSPPNMMISRFLQRLFTAP 489
+ HT LFVGGPHRGGTT+LWK LR HP + GF D+VGAD SEGIF+Q+VYP FGIG E G G A + T+GLGRY F+P++H+TE S L E R LFN+W +FW D K LEKSPPNMMISRFLQ LFT P
Sbjct: 78 VGNHTLLFVGGPHRGGTTILWKKLREHPEIAGFGDKVGADMSEGIFMQTVYPQFGIGAEINAGRMQGRGTIKANGDLDTRGLGRYMFNPDAHITEDSNLVNAENRMDLFNQWSYFWPVHDASKRVFLEKSPPNMMISRFLQALFTVP 224
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: A0A7S3YF46_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF46_HETAK) HSP 1 Score: 175 bits (443), Expect = 1.240e-50 Identity = 86/158 (54.43%), Postives = 115/158 (72.78%), Query Frame = 1
Query: 22 SMKVLDLDDDAVLSEIAGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDRVGADYSEGIFLQSVYPTFGIGGEAAHGAHGKAAAGRGMST-QGLGRYAFDPESHLTETSELATDEARTRLFNEWGFFWDLKK--PFLLEKSPPNMMISRFLQRLFTA 486
+MK + V + IA +FLFVGGPHRGGTT+LW+ LR HP++ GF D+ GAD SEGIF+QSV+P FGIG E + A A RG+ +GLG+YAF PE+H+TE LAT+ R +LFN++ +FWDL++ P LLEKSPPNM+ SRF+Q++F+A
Sbjct: 78 AMKEASYSQEQVTNLIASKSFLFVGGPHRGGTTILWQALREHPNITGFSDKTGADASEGIFIQSVFPQFGIGAEIS-AAKMAAQHNRGLGVMRGLGKYAFAPEAHMTEEHHLATERHRRKLFNQFAYFWDLRRDAPVLLEKSPPNMVYSRFIQKMFSA 234
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: A0A0M0JEP1_9EUKA (Nodulation protein noee n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEP1_9EUKA) HSP 1 Score: 160 bits (404), Expect = 3.550e-44 Identity = 76/147 (51.70%), Postives = 102/147 (69.39%), Query Frame = 1
Query: 49 DAVLSEIAGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDRVGADYSEGIFLQSVYPTFGIGGEAAHGAHGKAAAGRGMSTQGLGRYAFDPESHLTETSELATDEARTRLFNEWGFFWDLKKPFLLEKSPPNMMISRFLQRLFTAP 489
DA L+E H F+ +GGPHRGGTTL+W+ LR+HP+VG FP+RV +D+SEG FLQ+V PTFG+G E G+ G A GLGRYAF P++H+TET L T +L ++WG+FW+ +P LLEK+P +M+ SR LQ L + P
Sbjct: 12 DAFLAE---HRFIVIGGPHRGGTTLMWQLLRSHPAVGSFPERVASDFSEGSFLQTVLPTFGVGNELQMGSGGVNA-----KPMGLGRYAFSPDAHMTETHALNTRANSRQLLSQWGYFWNTSRPVLLEKTPTDMLTSRLLQALLSPP 150
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: R1E3X3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E3X3_EMIHU) HSP 1 Score: 154 bits (388), Expect = 9.490e-42 Identity = 77/163 (47.24%), Postives = 100/163 (61.35%), Query Frame = 1
Query: 1 FLALVPRSMKVLDLDDDAVLSEIAGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDRVGADYSEGIFLQSVYPTFGIGGEAAHGAHGKAAAGRGMSTQGLGRYAFDPESHLTETSELATDEARTRLFNEWGFFWD---LKKPFLLEKSPPNMMISRFLQRLF 480
++ L+P S K L L + H FLF+ GPHRGGTTLLW+ LR HP VG F +R D+SEG FLQSV PTFG+G E +G+GRY FDP +HLTE S LA+ +R L ++WG++W L++P LLEK+P NM+ +R LQ LF
Sbjct: 58 WMMLLPPSAKTLRLSAAEAEAMARRHRFLFIAGPHRGGTTLLWRLLRLHPQVGAFAERTDGDFSEGAFLQSVMPTFGVGREREDCLRAGVRRVGSPPARGVGRYGFDPGAHLTEASPLASLASRDALLSQWGYYWGEAGLERPLLLEKTPTNMLTARLLQSLF 220
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: A0A7S3S6U3_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S6U3_EMIHU) HSP 1 Score: 153 bits (387), Expect = 4.940e-41 Identity = 77/163 (47.24%), Postives = 100/163 (61.35%), Query Frame = 1
Query: 1 FLALVPRSMKVLDLDDDAVLSEIAGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDRVGADYSEGIFLQSVYPTFGIGGEAAHGAHGKAAAGRGMSTQGLGRYAFDPESHLTETSELATDEARTRLFNEWGFFWD---LKKPFLLEKSPPNMMISRFLQRLF 480
++ L+P S K L L + H FLF+ GPHRGGTTLLW+ LR HP VG F +R D+SEG FLQSV PTFG+G E +G+GRY FDP +HLTE S LA+ +R L ++WG++W L++P LLEK+P NM+ +R LQ LF
Sbjct: 98 WMMLLPPSAKTLRLSAAEAEAMARRHRFLFIAGPHRGGTTLLWRLLRLHPQVGAFAERTDGDFSEGAFLQSVMPTFGVGREREDCLRAGVRRVGSPPARGVGRYGFDPGAHLTEASPLASLVSRDALLSQWGYYWGEAGLERPLLLEKTPTNMLTARLLQSLF 260
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: A0A7S0LDN7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LDN7_9EUKA) HSP 1 Score: 148 bits (374), Expect = 2.640e-40 Identity = 73/152 (48.03%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 25 MKVLDLDDDAVLSEIAGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDRVGADYSEGIFLQSVYPTFGIGGEAAHGAHGKAAAGRGMSTQGLGRYAFDPESHLTETSELATDEARTRLFNEWGFFWDLKKPFLLEKSPPNMMISRFLQRLF 480
M L L + + I H+ + +GGPHRGGTT+LW+ + H SV F + AD+SEG FLQSV PT+G+G E + + RG+ST GLGRYA P +H TE S L ++ RT L +EWG +WDL++P LLEK+P NM+ +R LQ LF
Sbjct: 1 MLRLHLSVNDAIKIIRNHSIVLIGGPHRGGTTILWELISLHRSVSAFGSNIPADFSEGSFLQSVLPTYGVGNEESACFRHR----RGVSTAGLGRYALSPYAHQTENSPLNREDVRTLLVSEWGRYWDLERPVLLEKTPTNMVSARLLQALF 148
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: A0A7S0CNK2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CNK2_9EUKA) HSP 1 Score: 135 bits (341), Expect = 2.240e-35 Identity = 77/160 (48.12%), Postives = 96/160 (60.00%), Query Frame = 1
Query: 13 VPRSMKVLDLDDDAVLSEI-AGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDR--VGADYSEGIFLQSVYPTFGIGGEAAHGAHGKAAAGRGMSTQGLGRYAFDPES--HLTETSELATDEARTRLFNEWGFFWDLKKPFLLEKSPPNMMISRFLQRL 477
+P S + L + EI A T + VGGPHRGGTTLLW+CLR HP + F + +D SEGIFLQ VYP FGIG E A + RG G+G++A E HL E L T+ + RL N +G+FW++ KP LLEKSPPN +ISRFLQ L
Sbjct: 79 IPESWQYLSHTPEYWQKEILAKKTVVMVGGPHRGGTTLLWECLREHPDIANFGSQHQTASDLSEGIFLQDVYPNFGIGHEIAQSDWRRR---RG----GMGQFALGKEEWVHLLEDHRLVTEYNQARLLNRYGYFWNMSKPVLLEKSPPNAVISRFLQAL 231
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: A0A7S2RKY1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKY1_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.320e-34 Identity = 70/135 (51.85%), Postives = 89/135 (65.93%), Query Frame = 1
Query: 79 TFLFVGGPHRGGTTLLWKCLRAHPSVGGFPD--RVGADYSEGIFLQSVYPTFGIGGEAAHGAHGKAAAGRGMSTQGLGRYAFDPES--HLTETSELATDEARTRLFNEWGFFWDLKKPFLLEKSPPNMMISRFLQ 471
T + +GGPHRGGTT+LW+CLR H VG F + G+D+SEGIFLQ VYP FG+GGE G AG+G G+G+Y F E H TE L ++E++ RL N +G+ W+L K LLEKSPPNM + RFLQ
Sbjct: 96 TIVMIGGPHRGGTTVLWECLRQHEDVGDFGTTFQSGSDFSEGIFLQDVYPQFGVGGEIQSMMPG-GQAGKG----GMGKYLFAEEELVHWTEEHPLVSEESQARLLNSFGYHWNLSKRVLLEKSPPNMHLGRFLQ 225
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Match: A0A7S2V2M0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2M0_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.750e-33 Identity = 74/165 (44.85%), Postives = 92/165 (55.76%), Query Frame = 1
Query: 13 VPRSMKVLDLDDDAVLSEIAGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDRV--GADYSEGIFLQSVYPTFGIGGEAAHGAHGKAAAGRGMSTQ--GLGRYAFDPES--HLTETSELATDEARTRLFNEWGFFWDLKKPFLLEKSPPNMMISRFLQRLFTAP 489
V RS L+L S + T L +GGPHRGGTT++WK + HP V GF GAD+SEGI +Q VYP FG+G E A G TQ G G+YA E+ HL ET E T +L N +G +W+L KP L EKSPP ++SRFLQ L+ P
Sbjct: 16 VDRSYFDLNLSPSEWRSIMKDKTVLLIGGPHRGGTTIIWKAITQHPLVAGFGSTFESGADHSEGILIQDVYPQFGVGMEKIM------ANMAGFKTQMIGAGKYALGDEAKVHLIETDEKVTPSNMAKLLNRFGSYWNLTKPVLAEKSPPTAVMSRFLQALYNVP 174 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17100.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17100.1.1 >prot_P-wetherbeei_contig17100.1.1 ID=prot_P-wetherbeei_contig17100.1.1|Name=mRNA_P-wetherbeei_contig17100.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp MKVLDLDDDAVLSEIAGHTFLFVGGPHRGGTTLLWKCLRAHPSVGGFPDRback to top mRNA from alignment at P-wetherbeei_contig17100:168..656- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17100.1.1 ID=mRNA_P-wetherbeei_contig17100.1.1|Name=mRNA_P-wetherbeei_contig17100.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig17100:168..656- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17100:168..656- >mRNA_P-wetherbeei_contig17100.1.1 ID=mRNA_P-wetherbeei_contig17100.1.1|Name=mRNA_P-wetherbeei_contig17100.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig17100:168..656- (Phaeothamnion wetherbeei SAG_119_79)back to top |