mRNA_P-wetherbeei_contig1710.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1710.1.1
Unique NamemRNA_P-wetherbeei_contig1710.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: D7FV14_ECTSI (Phosphatidate cytidylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV14_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 5.000e-74
Identity = 116/188 (61.70%), Postives = 141/188 (75.00%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVDDLNLIPRTLHCQVDKVFVVQEVRVPHSIVHFFRSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAELHRQLGRLVGA 564
            +TWEGF+GA   T ++A+  S +LA FEWFTCPV DLN  P+ +HC  D VF+  E  VP S+  F  +FLF  LP    S  +APIQLHAL+MA FTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFV V+ +TFIR  + +V GLLA+A++LS  E+ EL  +L  ++ +
Sbjct:  153 KTWEGFMGAFFFTCLFAFYFSAFLAKFEWFTCPVQDLNFRPKPIHCNPDAVFLPAEFVVPESVRWFMEAFLFFRLPVASLSVTLAPIQLHALLMAGFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTVEGLLAAATMLSHSEQMELLDELKHMMNS 340          
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: A0A6H5L891_9PHAE (Phosphatidate cytidylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L891_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 4.840e-73
Identity = 116/188 (61.70%), Postives = 142/188 (75.53%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVDDLNLIPRTLHCQVDKVFVVQEVRVPHSIVHFFRSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAELHRQLGRLVGA 564
            +TWEGFIGA   T ++A+  S +LA FEWFTCPV DLN  P+ +HC  D VF+  E  +P S+  F  +FLF  LP    S  +APIQLHAL+MA FTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFV V+ +TFIR  + +V GLLA+A++LS  E+ EL  +L +++ +
Sbjct:  246 KTWEGFIGAFFFTCLFAFYFSAFLAKFEWFTCPVQDLNFRPKPIHCNPDAVFLPAEFVMPESVRWFMEAFLFFRLPVASLSVTLAPIQLHALLMAGFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVHYNTFIRPNITTVEGLLAAATMLSHSEQLELLDELKQMMNS 433          
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: A0A836C8B8_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B8_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.360e-67
Identity = 116/198 (58.59%), Postives = 141/198 (71.21%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVDDLNLIPRT------LHCQVDKVFVVQEVRVPHSIVHFFRSFLFLELPARLHSA------VIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAELHRQLGRLV 558
            +TWEGF+GAM+ T V A+  + +LA ++WFTCPV+ L L   +      LHC  D VF VQE+ +P  I+ FF++FL ++L   L         V  PIQLHA+VMA+FTS+IAPFGG+WASAIKR YGIKDFDSIIPGHGGVTDRMDCQFITALFV VY  TFIR   V+VG LLA ASLL  E+R EL  +L +L 
Sbjct:  185 KTWEGFLGAMVFTVVIAYFAAGFLAQYQWFTCPVERLTLGLASNDGYTQLHCVADPVFQVQEMHIPGPILRFFKNFLLIDLNMMLERVFGTSCLVTKPIQLHAMVMASFTSLIAPFGGFWASAIKRTYGIKDFDSIIPGHGGVTDRMDCQFITALFVSVYFRTFIRPHAVTVGSLLAQASLLPLEQRQELMLELSKLA 382          
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: A0A7S2XX50_9STRA (Phosphatidate cytidylyltransferase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX50_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.810e-51
Identity = 97/191 (50.79%), Postives = 126/191 (65.97%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVDDLNLIPRTLH-----CQVDKVFVVQEVRVPHSIVHFFRSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAELHRQLGRLV 558
            +TWEGF+GA + T V+A+  S  LA F++  C VDDL   P ++H     CQ D +F VQ + +P  IV        L + A + S    PIQ HAL +  F S++APFGG+ ASAIKRAY IKDFDS+IPGHGGV DR+DCQFI ALF +VY  TF+R  +VSV  +LAS SLLS EE+ +L  +L +L+
Sbjct:  130 KTWEGFLGAFVCTIVFAYYWSALLARFKFLLCEVDDLYFNPASVHRELRNCQPDPIFQVQTLTLPEHIVEL------LPIAANI-SWKCCPIQWHALFLGAFGSLVAPFGGFLASAIKRAYMIKDFDSLIPGHGGVMDRLDCQFIMALFTWVYYGTFVRTSLVSVEAVLASVSLLSAEEKQQLMSELKQLL 313          
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: K3X184_GLOUD (Phosphatidate cytidylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X184_GLOUD)

HSP 1 Score: 176 bits (445), Expect = 4.990e-50
Identity = 95/187 (50.80%), Postives = 120/187 (64.17%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVDDLNLIPRTLHCQVDKVFVVQEVRVPHSIVHFF-RSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAELHRQLGRLV 558
            +TWEGFIGA + T V+A   S +LA FEW  CP++ L LIP +L C   +VF      VP SI  +  RS                PIQ+H++  ATF SVI+PFGG++ASAIKR YG+KDFDS+IPGHGGV DRMDCQ ITALF  VY +TFIR  M SV  +L   S LS EE+ E+ +++  L+
Sbjct:  244 KTWEGFIGAFVCTVVFAIFASAWLAKFEWMICPLESLQLIPGSLSCPRHEVFSPAVYTVPASIAGYIGRS-----------QIAYYPIQIHSICFATFASVISPFGGFYASAIKRTYGLKDFDSVIPGHGGVMDRMDCQLITALFTSVYYNTFIRSPMPSVAMILNIVSRLSVEEQHEVLQRIQELL 419          
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: A0A5D6XX18_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX18_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.100e-49
Identity = 91/186 (48.92%), Postives = 121/186 (65.05%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVDDLNLIPRTLHCQVDKVFVVQEVRVPHSIVHFFRSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAELHRQLGRLV 558
            +TWEGFIGA   T V+A  CS +LA F+W  CP++ L LIP  L C V  VFV     VP S+  +           R   A + PIQ+H++  ATF SV+APFGG++ASAIKR + +KDFDS+IPGHGGV DRMDCQFITALF  VY +TFIR  + SV  ++   S LS +++ E+ +++  L+
Sbjct:  241 KTWEGFIGAFACTIVFAVFCSAWLAKFQWMICPLESLQLIPDALSCPVRGVFVPTVYTVPASVAKYI---------GRSQIAYL-PIQIHSIWFATFASVVAPFGGFYASAIKRTHNLKDFDSVIPGHGGVMDRMDCQFITALFTSVYYNTFIRSPVPSVAMVVNIVSKLSLDDQHEVLQRIQELL 416          
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: B7S449_PHATC (Phosphatidate cytidylyltransferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7S449_PHATC)

HSP 1 Score: 170 bits (431), Expect = 1.800e-48
Identity = 88/178 (49.44%), Postives = 115/178 (64.61%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVDDLNLIPRTLHCQVDKVFVVQEVRVPHSIVHFF-RSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAE 531
            +TWEGFIG  + T V AW  S +LA F W TCP ++  L P +L C++D VF + +  +P  I     R FL  +           P+Q+HAL +A F S++APFGG+ ASAIKRAYG+KDFDSIIPGHGGV DRMDCQF+ AL  +V+ +TF++   VSV  L    SLLS +E+ E
Sbjct:  178 KTWEGFIGGWIFTMVIAWYLSGFLAKFTWMTCPTNEFRLAPVSLECELDPVFQIAQSFIPAQIFDILPRYFLVFKN--------YFPVQVHALWLAMFASLVAPFGGFLASAIKRAYGVKDFDSIIPGHGGVMDRMDCQFLMALCTWVHYNTFVKLATVSVPRLTYMYSLLSEQEKKE 347          
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: A0A812TRE2_SYMMI (Phosphatidate cytidylyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TRE2_SYMMI)

HSP 1 Score: 166 bits (420), Expect = 9.680e-48
Identity = 84/189 (44.44%), Postives = 123/189 (65.08%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVDDLNLIPRT---LHCQVDKVFVVQEVRVPHSIVHFFRSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAELHRQLGRLV 558
            +TWEGFIG  +LT ++++     L+ F WFTCP ++L+ IP     L C+V+ VF+ ++  +P   +H  R    L   A   +  + PIQLH L+   F S++APFGG+ ASAIKRAY IKDFD++ PGHGG+ DRMDCQ +  LF +V+  TF+   + ++  LL SASLLS E++ +LH++LG  +
Sbjct:   92 KTWEGFIGGGLLTMLFSFFFPVLLSQFTWFTCPAEELSFIPPAVPALSCEVNPVFLQRDYEIP---LHLLRG---LFANASSVTVTLLPIQLHGLMYGLFASIVAPFGGFMASAIKRAYNIKDFDTLFPGHGGMMDRMDCQLLMLLFTWVHMFTFVVPRVPTIHNLLLSASLLSLEDQIQLHQELGEQI 274          
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: A0A1V9Z6N2_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6N2_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.110e-47
Identity = 89/183 (48.63%), Postives = 116/183 (63.39%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVDDL-NLIPRTLHCQVDKVFVVQEVRVPHSIVHFFRSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAELHRQL 546
            +TWEGFIGA+  T V+A+  S +LA   W TCP++ L    P  L C V  VFV     +P  +   F +   ++L          PIQ+HA+V A FTS+I+PFGG++ASAIKRAY +KDFDS++PGHGGV DRMDCQFITALF  VY  TFI     +V  +L S   LS EE+ ++ +QL
Sbjct:  256 KTWEGFIGALFCTLVFAFFSSSFLASISWMTCPLNTLPEFFPEPLSCNVHPVFVPTWYSIPTFVTSIFPTLTRIQL---------YPIQIHAIVFAIFTSIISPFGGFYASAIKRAYKLKDFDSLLPGHGGVMDRMDCQFITALFTSVYCSTFIWSYHTNVEAILTSVMRLSIEEQQQILQQL 429          
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Match: A0A1V9YRB8_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRB8_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.300e-47
Identity = 93/188 (49.47%), Postives = 117/188 (62.23%), Query Frame = 1
Query:    1 QTWEGFIGAMMLTWVYAWLCSRYLAGFEWFTCPVD-DLNLIPRTLHCQVDKVFVVQEVRVPHSIVHFFRSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWASAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVSVGGLLASASLLSPEERAELHRQLGRLVG 561
            +TWEGFIGA   T V+A+  S +LA   W TCP+D    L P  L C V  VFV     VP ++           LPA  H   + P+QLHA+V A+FTSVI+PFGG++ASAIKRAY +KDFDS++PGHGGV DRMDCQFITALF  VY  TFI     +V  ++ S   LS  E+ ++  QL   +G
Sbjct:  245 KTWEGFIGAFFCTLVFAFFSSAWLATLPWMTCPLDAPPQLFPDPLACNVHPVFVPASYAVPAAVTSL--------LPAVTHVQ-LYPVQLHAIVFASFTSVISPFGGFYASAIKRAYKLKDFDSLLPGHGGVMDRMDCQFITALFTAVYCSTFIWSYHTNVEAIVTSVLRLSENEQRQILLQLQSAIG 423          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1710.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV14_ECTSI5.000e-7461.70Phosphatidate cytidylyltransferase n=1 Tax=Ectocar... [more]
A0A6H5L891_9PHAE4.840e-7361.70Phosphatidate cytidylyltransferase n=1 Tax=Ectocar... [more]
A0A836C8B8_9STRA1.360e-6758.59Phosphatidate cytidylyltransferase n=1 Tax=Tribone... [more]
A0A7S2XX50_9STRA1.810e-5150.79Phosphatidate cytidylyltransferase (Fragment) n=1 ... [more]
K3X184_GLOUD4.990e-5050.80Phosphatidate cytidylyltransferase n=1 Tax=Globisp... [more]
A0A5D6XX18_9STRA5.100e-4948.92Phosphatidate cytidylyltransferase n=1 Tax=Pythium... [more]
B7S449_PHATC1.800e-4849.44Phosphatidate cytidylyltransferase (Fragment) n=1 ... [more]
A0A812TRE2_SYMMI9.680e-4844.44Phosphatidate cytidylyltransferase n=1 Tax=Symbiod... [more]
A0A1V9Z6N2_9STRA1.110e-4748.63Phosphatidate cytidylyltransferase n=1 Tax=Thraust... [more]
A0A1V9YRB8_9STRA1.300e-4749.47Phosphatidate cytidylyltransferase n=1 Tax=Achlya ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1710contigP-wetherbeei_contig1710:83..1513 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FV14
Preferred nameCDS1
PFAMsCTP_transf_1
Model size564
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K00981,ko:K08818
KEGG ReactionR01799
KEGG Pathwayko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070
KEGG ModuleM00093
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004142,GO:0004605,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005783,GO:0005789,GO:0006139,GO:0006220,GO:0006221,GO:0006575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006656,GO:0006657,GO:0006658,GO:0006661,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007349,GO:0007602,GO:0007603,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009266,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009628,GO:0009653,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010511,GO:0010513,GO:0010562,GO:0010866,GO:0010868,GO:0010883,GO:0012505,GO:0016020,GO:0016021,GO:0016024,GO:0016056,GO:0016740,GO:0016772,GO:0016779,GO:0016780,GO:0017169,GO:0018130,GO:0019216,GO:0019220,GO:0019222,GO:0019438,GO:0019637,GO:0019866,GO:0019953,GO:0022412,GO:0022414,GO:0023052,GO:0030133,GO:0030154,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031410,GO:0031966,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0034641,GO:0034654,GO:0040011,GO:0042175,GO:0042330,GO:0043052,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0045833,GO:0045834,GO:0045937,GO:0046341,GO:0046470,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0046488,GO:0046889,GO:0046890,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051055,GO:0051174,GO:0051606,GO:0051704,GO:0051716,GO:0055086,GO:0065007,GO:0065008,GO:0070085,GO:0070319,GO:0070382,GO:0070567,GO:0071071,GO:0071073,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0072527,GO:0072528,GO:0080090,GO:0090207,GO:0090209,GO:0090407,GO:0097164,GO:0097708,GO:0098827,GO:0099503,GO:0104004,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903725,GO:1903727,GO:1905952
Exons3
Evalue3.6e-68
EggNOG OGsCOG0575@1|root,KOG1440@2759|Eukaryota
EC2.7.11.22,2.7.7.41
Descriptionphosphatidate cytidylyltransferase activity
Cds size537
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186107.7786977-UTR-P-wetherbeei_contig1710:82..1091683186107.7786977-UTR-P-wetherbeei_contig1710:82..109Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1710 83..109 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186107.7931106-CDS-P-wetherbeei_contig1710:109..2231683186107.7931106-CDS-P-wetherbeei_contig1710:109..223Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1710 110..223 +
1683186107.8028958-CDS-P-wetherbeei_contig1710:753..9691683186107.8028958-CDS-P-wetherbeei_contig1710:753..969Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1710 754..969 +
1683186107.8129337-CDS-P-wetherbeei_contig1710:1306..15131683186107.8129337-CDS-P-wetherbeei_contig1710:1306..1513Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1710 1307..1513 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1710.1.1prot_P-wetherbeei_contig1710.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1710 110..1513 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1710.1.1

>prot_P-wetherbeei_contig1710.1.1 ID=prot_P-wetherbeei_contig1710.1.1|Name=mRNA_P-wetherbeei_contig1710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp
MMLTWVYAWLCSRYLAGFEWFTCPVDDLNLIPRTLHCQVDKVFVVQEVRV
PHSIVHFFRSFLFLELPARLHSAVIAPIQLHALVMATFTSVIAPFGGYWA
SAIKRAYGIKDFDSIIPGHGGVTDRMDCQFITALFVFVYRDTFIRRGMVS
VGGLLASASLLSPEERAELHRQLGRLVGA
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mRNA from alignment at P-wetherbeei_contig1710:83..1513+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1710.1.1 ID=mRNA_P-wetherbeei_contig1710.1.1|Name=mRNA_P-wetherbeei_contig1710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1431bp|location=Sequence derived from alignment at P-wetherbeei_contig1710:83..1513+ (Phaeothamnion wetherbeei SAG_119_79)
CAGACGTGGGAGGGGTTCATCGGGGCGATGATGCTGACGTGGGTGTACGC GTGGCTGTGCTCGCGGTACCTGGCGGGCTTCGAGTGGTTCACGTGCCCCG TCGATGACCTCAACCTCATCCCTCGCACCCTCCACTGCCAGGTCACGGTA ACGGTATCATACGGCAGTTAGGCTCGGTCCAGGCTGAGACCTGTCAGTTC TTATTTGTTTCATTATGGTCTTGTTTCGGTTCTGTTGTGGACCCCTTTGA CGTTGGAGGACCCAGCTGTTCATCCTCTTAAAGGGCTGAAGAGTTCCTGT TGAATTTCGCAATGAAGTAAGTGTGCTGGTGCCTGCTTGCCTAGGGTCAT TATTTGGTTATGTCTCATCGGATTCGATCAGATTTGGTTCGGTCAAGCTC GGTTTTGATTGGAGGTCAGTTCGGTCAGAGTAGGTACGGAGTTGTGGTCT TGCTCTTCTGAGGGTTTAAGCGGCAGCCGGCTTGTCTGCCAGATACCCTT GCTCTAAATGCGCCTTGCTGACTGCACCATATTCTTTCCCAAACTCTGCT CGCCTCGTCCCCCGTCTGGATCTTCCTGTCCATCTCGGCGGCCGTCGCCA TGGCGCCGCCCCTCTTCTTACGGCGGCGTCCGTTACGGCGTTACGGCGCA ATCCCGTCAACGCTAAAACAGGTGGACAAGGTGTTCGTGGTGCAGGAGGT GCGGGTGCCGCACTCCATCGTGCATTTCTTCCGCTCCTTCCTCTTCCTTG AACTGCCGGCGCGGCTCCACTCGGCCGTCATCGCGCCCATCCAGCTACAC GCGCTGGTCATGGCCACCTTCACGTCTGTCATCGCGCCTTTCGGCGGCTA CTGGGCGTCAGCCATCAAGCGCGCTTACGGCATCAAGGTGAGGAAGGGCG TGGCAGTTTCATGTGCATTTCGCACTGTATGAGAGCGATGCGGGCTGAGG GATCGAGGGACGAAGGAGTTGTTCACACCACTGCAAGTTTTGAGTTTGGG AGGACATCCTGTCCTTTCTTTTCCTTCCGAGTCGACATTGTAATCGCTGG AAATCAGTTGTCGAGGGGTACTGTATCTAATCAAAGGCATAACTGGACAG CAAGTCTCTCTTTCTCTCGGTTAGAAGCAGTGTGTGCACCGTAACTGGTG ACAGCGCAAACCTCTCCTGAACTTCCCTCGCCTTTTCTGCGTCAACGCTA ACCAATCAACTCCTCCTTCCACAGGACTTCGACAGCATCATCCCGGGCCA CGGCGGCGTCACCGACCGCATGGACTGCCAGTTCATCACGGCGCTCTTCG TCTTTGTCTACCGAGACACCTTCATCCGCCGCGGCATGGTCAGCGTCGGC GGCTTGCTCGCCTCGGCGTCGCTGCTGTCACCAGAGGAGCGGGCCGAGTT GCACCGGCAGCTGGGACGGCTGGTTGGTGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1710:83..1513+

>mRNA_P-wetherbeei_contig1710.1.1 ID=mRNA_P-wetherbeei_contig1710.1.1|Name=mRNA_P-wetherbeei_contig1710.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig1710:83..1513+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATGCTGACGTGGGTGTACGCGTGGCTGTGCTCGCGGTACCTGGCGGG
CTTCGAGTGGTTCACGTGCCCCGTCGATGACCTCAACCTCATCCCTCGCA
CCCTCCACTGCCAGGTGGACAAGGTGTTCGTGGTGCAGGAGGTGCGGGTG
CCGCACTCCATCGTGCATTTCTTCCGCTCCTTCCTCTTCCTTGAACTGCC
GGCGCGGCTCCACTCGGCCGTCATCGCGCCCATCCAGCTACACGCGCTGG
TCATGGCCACCTTCACGTCTGTCATCGCGCCTTTCGGCGGCTACTGGGCG
TCAGCCATCAAGCGCGCTTACGGCATCAAGGACTTCGACAGCATCATCCC
GGGCCACGGCGGCGTCACCGACCGCATGGACTGCCAGTTCATCACGGCGC
TCTTCGTCTTTGTCTACCGAGACACCTTCATCCGCCGCGGCATGGTCAGC
GTCGGCGGCTTGCTCGCCTCGGCGTCGCTGCTGTCACCAGAGGAGCGGGC
CGAGTTGCACCGGCAGCTGGGACGGCTGGTTGGTGCT
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