mRNA_P-wetherbeei_contig171.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig171.4.1
Unique NamemRNA_P-wetherbeei_contig171.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: D7G8J2_ECTSI (Aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8J2_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 2.310e-38
Identity = 70/123 (56.91%), Postives = 91/123 (73.98%), Query Frame = 1
Query:    1 VRISVHVAAPADPAHLAFSLAYAIQAFEFFATLLQVPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVTEATDVTRRRRILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEFVAV 369
            V+I+VHV    D   + F+L +A +AFE F+ L  V +P PKLDLI L + HGLGME++GAIT ++++L+VT  T   RRRRI RLI HE+ H W G+LVTP SFDELWLKEG+ARF E++AV
Sbjct:  193 VQINVHVVRGVDLKGVEFALEFATRAFELFSKLFSVRFPIPKLDLIGLPQMHGLGMENFGAITCLQEYLVVTPDTTFVRRRRIARLICHEISHMWYGDLVTPNSFDELWLKEGMARFFEYLAV 315          
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: A0A835YII6_9STRA (Aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YII6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.740e-30
Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 1
Query:   52 FSLAYAIQAFEFFATLLQ-VPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVTEATDVTRRRRILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEFVAV 369
            ++L     AFEFF+ L +  PYP  KLDLI +    G+GME+YGAIT+ +D +L+       RRRR  RL+ HEV HQW GNL TPRSFD+LWLKEG+AR+ EFVA+
Sbjct:  145 YALELTRAAFEFFSALFEGAPYPLNKLDLICVPAMRGIGMENYGAITLRQDFMLLHADAAFARRRRAARLVCHEVSHQWYGNLATPRSFDDLWLKEGLARYFEFVAL 251          
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: A0A7S2Y7F7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7F7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.610e-22
Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 1
Query:   52 FSLAYAIQAFEFFATLLQVPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVTEATDVTRRRRILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEFVAV 369
            F L  A++  + +  L ++PYP  K DL+A+       ME++G +T  E  +LVTE T  T +R I R + HE+ HQW GNLVT   + +LWLKEG ARF EF+ +
Sbjct:   39 FCLDTAVRCLDLYQDLFKIPYPLTKSDLLAIPDFAAGAMENWGVVTYREAKILVTEQTSETLKRGIARTVCHELAHQWFGNLVTMEYWTQLWLKEGAARFFEFIGI 144          
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: A0A1S5QN24_TITSE (Aminopeptidase n=1 Tax=Tityus serrulatus TaxID=6887 RepID=A0A1S5QN24_TITSE)

HSP 1 Score: 100 bits (248), Expect = 4.770e-22
Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 1
Query:   22 AAPADPAHLAFSLAYAIQAFEFFATLLQVPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVTEATDVT-RRRRILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEFVA 366
            A P   +   F+L  A +   FF +L QVPY  PKLD+  ++K    GME++G IT  E+ +L  EA D   +++ ++ L+ HE+ HQW GNLVT + +D+LWL EG+ +++E VA
Sbjct:  279 ATPEKISETKFALEEANKILSFFESLFQVPYDAPKLDMAVIKKLDSKGMENWGLITYHENSVLFNEAKDDDYKKKNVIELVAHEIAHQWYGNLVTLKWWDDLWLNEGITKYMEKVA 394          
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: A0A0G4GQC2_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GQC2_VITBC)

HSP 1 Score: 99.0 bits (245), Expect = 1.230e-21
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 1
Query:  106 VPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVTEA-TDVTRRRRILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEFVAV 369
            VPY   KLDL+ ++   G+G+E++G IT   D   V++  T  +RRRRI RLI HEV H W G+ +TP +FDEL+LKEGVAR+LEFVA+
Sbjct:  613 VPYALSKLDLLGIKPHRGIGLENFGCITFDIDFFSVSDLMTGWSRRRRISRLICHEVSHMWFGDCLTPHTFDELFLKEGVARYLEFVAL 701          
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: A0A7S3UU77_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU77_HETAK)

HSP 1 Score: 97.4 bits (241), Expect = 2.220e-21
Identity = 54/124 (43.55%), Postives = 73/124 (58.87%), Query Frame = 1
Query:    1 VRISVHVAAPADPAHLAFSLAYAIQAFEFFATLLQVPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVTE-ATDVTRRRRILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEFVAV 369
            V+++V+   P   A   F+L  A QA E +  L  VPYP  K DL+A+       ME++G +T  E  LLV   A+ +  R+RI R + HE+ HQW GNLVT   +  LWL EG AR++EFVAV
Sbjct:   83 VQVTVYTP-PGKSAQGTFALDVACQALELYEELYGVPYPLTKSDLLAIPDFAAGAMENWGCVTYREARLLVEPGASSLDARKRIARTVCHELAHQWFGNLVTMEWWTHLWLNEGFARYMEFVAV 205          
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: A0A1G1Z6T2_9BACT (Aminopeptidase n=2 Tax=Candidatus Colwellbacteria TaxID=1817904 RepID=A0A1G1Z6T2_9BACT)

HSP 1 Score: 98.2 bits (243), Expect = 2.230e-21
Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 1
Query:   52 FSLAYAIQAFEFFATLLQVPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVT-EATDVTRRRRILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEFVAV 369
            F+L  A++  EF+    ++PYP PKLDLIA+       ME++GA+T  E  LL+  E +   RR+R+  +I HE  HQW GNLVT   +  LWL EG A F+E++AV
Sbjct:  211 FALDTAVKVLEFYEDYFEIPYPLPKLDLIAIPDFAAGAMENWGAVTYRETALLIDKENSSAARRQRVAIVIAHETSHQWFGNLVTMDWWTNLWLNEGFASFMEYLAV 317          
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: D7FH13_ECTSI (Aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH13_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.250e-21
Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 1
Query:   52 FSLAYAIQAFEFFA-TLLQVPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVTEATDVTRRRR-ILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEFVAV 369
            F+L  A +A E++A T+ +VPYP  K DL+A+       ME++G +T  E  LLV EAT  T  ++ I R + HE+ HQW GNLVT   +D LWL EG AR++EFVAV
Sbjct:  253 FALHVASKALEYYAETVFKVPYPLQKSDLLAIPDFAAGAMENWGCVTYREARLLVHEATSSTATKKAIARTVCHELAHQWFGNLVTMEWWDALWLNEGFARYMEFVAV 360          
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: W6LAM3_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate Hart1 TaxID=134013 RepID=W6LAM3_9TRYP)

HSP 1 Score: 98.2 bits (243), Expect = 2.280e-21
Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = 1
Query:   28 PADPAHLAFSLAYAIQAFEFFATLLQVPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVTEATDVTRRRRILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEF 360
            PA  A  A  L     A  FF +         KLD++ALE    LGME++G I I+ ++LLV ++T V RR+RI RL+GHEVCH W GN ++   ++++WLKEG+ R LE+
Sbjct:  335 PASSARYALDLLN--MAVNFFNSFFNFRIGLKKLDVVALECFQSLGMENWGMINILMEYLLVKDSTPVERRQRIARLVGHEVCHHWFGNRLSIEWWNDIWLKEGLCRLLEY 443          
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Match: V4J5W6_9CREN (Aminopeptidase N n=1 Tax=uncultured Acidilobus sp. CIS TaxID=1410574 RepID=V4J5W6_9CREN)

HSP 1 Score: 97.4 bits (241), Expect = 3.930e-21
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 1
Query:   13 VHVAAPADPAHLAFSLAYAIQAFEFFATLLQVPYPFPKLDLIALEKSHGLGMEHYGAITIVEDHLLVTEATDVTRRRRILRLIGHEVCHQWIGNLVTPRSFDELWLKEGVARFLEFVAV 369
            V VA P    +   +L  A ++ EF+     +PYP PK+ LIA+ +     ME++GAIT  E+ LL  E  D+ +RRR+  ++ HE+ HQW G+LVT R +D+LWL E  A F+ F A+
Sbjct:  188 VVVAPPGRTRYGRLALWAARRSVEFYERYFGIPYPMPKMHLIAVPEFAFGAMENWGAITFRENALLAPEDADLAQRRRVAEVVAHEIAHQWFGDLVTMRWWDDLWLNESFATFMSFKAL 306          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig171.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8J2_ECTSI2.310e-3856.91Aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A835YII6_9STRA3.740e-3055.14Aminopeptidase n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2Y7F7_9STRA4.610e-2243.40Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1S5QN24_TITSE4.770e-2241.38Aminopeptidase n=1 Tax=Tityus serrulatus TaxID=688... [more]
A0A0G4GQC2_VITBC1.230e-2153.93Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A7S3UU77_HETAK2.220e-2143.55Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1G1Z6T2_9BACT2.230e-2144.86Aminopeptidase n=2 Tax=Candidatus Colwellbacteria ... [more]
D7FH13_ECTSI2.250e-2148.15Aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
W6LAM3_9TRYP2.280e-2144.14Uncharacterized protein n=1 Tax=Phytomonas sp. iso... [more]
V4J5W6_9CREN3.930e-2141.18Aminopeptidase N n=1 Tax=uncultured Acidilobus sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig171contigP-wetherbeei_contig171:8069..9652 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G8J2
PFAMsERAP1_C,Peptidase_M1
Model size372
Max annot lvl2759|Eukaryota
KEGG koko:K01507
KEGG Pathwayko00190,map00190
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.79e-39
EggNOG OGsCOG0308@1|root,KOG1046@2759|Eukaryota
EC3.6.1.1
Descriptionmetalloaminopeptidase activity
Cds size369
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186107.6117764-CDS-P-wetherbeei_contig171:8068..81731683186107.6117764-CDS-P-wetherbeei_contig171:8068..8173Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig171 8069..8173 +
1683186107.62448-CDS-P-wetherbeei_contig171:8583..86761683186107.62448-CDS-P-wetherbeei_contig171:8583..8676Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig171 8584..8676 +
1683186107.6350446-CDS-P-wetherbeei_contig171:9127..92131683186107.6350446-CDS-P-wetherbeei_contig171:9127..9213Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig171 9128..9213 +
1683186107.64572-CDS-P-wetherbeei_contig171:9565..96501683186107.64572-CDS-P-wetherbeei_contig171:9565..9650Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig171 9566..9650 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig171.4.1prot_P-wetherbeei_contig171.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig171 8069..9650 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig171.4.1

>prot_P-wetherbeei_contig171.4.1 ID=prot_P-wetherbeei_contig171.4.1|Name=mRNA_P-wetherbeei_contig171.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp
VRISVHVAAPADPAHLAFSLAYAIQAFEFFATLLQVPYPFPKLDLIALEK
SHGLGMEHYGAITIVEDHLLVTEATDVTRRRRILRLIGHEVCHQWIGNLV
TPRSFDELWLKEGVARFLEFVAV
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mRNA from alignment at P-wetherbeei_contig171:8069..9652+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig171.4.1 ID=mRNA_P-wetherbeei_contig171.4.1|Name=mRNA_P-wetherbeei_contig171.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1584bp|location=Sequence derived from alignment at P-wetherbeei_contig171:8069..9652+ (Phaeothamnion wetherbeei SAG_119_79)
GTCCGCATCTCGGTGCACGTTGCGGCGCCGGCTGACCCGGCTCATCTGGC CTTCTCGCTGGCGTACGCCATCCAGGCGTTTGAATTCTTTGCGACTCTCC TCCAGGTGCGTGTACTAGTAACAAACAGTCTGCAGGGGCAGCTGCTGCAA AATAGAGGTCGTTTTGGTTTGCGTGGCATTTGGGCCGATTCCGTTTTCTT CGGAGACTGTTTGCAGAGACGTGCGATTGACTGGGAGGGGCCTTCTTTTG TCGTTTGAAGGCGCAGTACGAGACAAAGAGCCTGTCAGAAAGGATCTGGT TACGCAAAAGGAGCGCTTCTTTGCACACTATCACTTCCAGAATGGAAACG ACCAAATGCCAGCCGGTTTCCTGTTGCTCGCTGGACGCGGCGGAACGACA CAGGAGCATTGTCGTTTTCGGAAGCAGTTGACGAATGCAGCCCGGTTTGT TTCTCTGAATCCCCTCTCTTTCCTCCGACTCCCGACGGCGCGGCGGAACC GGAACGCGTGCGCAGGTGCCGTATCCGTTCCCCAAGTTGGACCTGATCGC CCTCGAGAAATCGCACGGCCTCGGCATGGAGCACTATGGTGCCATCACCA TTGTAGAGGTGACTTTTCTTTCAGAAAACTGCGGGCAGTGGTTTCGGTAG TTTCGGCGGTGATCGAGCGGGTTTCCGGCGGGTTCGATGGCAACCGGACG CATGGGCGGTGGTTTCGGCGGCGGCTGGTGGCGGCGGCTGGCGGTGACGG TAATGGCAGCTTGAAAGGCGGAGAGCGGGAAGGGACAGCTGCTGTGGTTA TGCAATGGCGGGGAGACGATCATTCTTTCTCTGCCTGTACCTCAGCAATT TGATTGGTGCCGTTGGCGGGGCATTTCAAAACCGCCGTATGACATTGACG GTGCACTTTCCTTTTCTCCCTCCTCCCGTCGCAACTTGCGTCCGGCGCCC CTCATTCGTTCCGTCCGTCTCTTCCGTCCATCTCTTCCGTCCGTTTCGCT CGCGGTGTTTTTTTTCGGGATCGGATCTTTTGGCGGGCGGGCGTGCCGGA CCGGCGTAGGATCACCTGTTAGTGACGGAGGCGACAGACGTCACCCGGAG GCGCCGCATCCTCCGACTCATCGGCCACGAGGTCTGCCACCAGTGGTAAG TGAAGATTTCTTTTCTTCCCCTTTTTTCTCCATTTTTTCCTATCCTATTT GTTCCTGTCTTCTTTCGGGTCCACTTGATAGTCGTTGTCTATTTATGATG CTGTACGCGAAATTGGCGCGCTATCGTTAAGGCTTTGCCCTGCTTTTGGC GCACTAGATTGAATTTAGCCCCAACGAAATCTTCGTGCTCTGCTTTCTGG CCCAAGGGAACCTTCTGCCCGCTGGCTGCCCATCTCGCACGAATTTTCTT TCTGCCTTCTTTCCCGAACCTTCTTTCTTCCTTTCTTCTTTTTCTCCTTC TTTTCTTCTTTTTTTCTTCCTTATTTCCCCTCCCTCCTCCGTCCCAGGAT CGGCAATCTTGTCACCCCGCGCAGCTTCGACGAGCTCTGGCTGAAAGAAG GCGTCGCCCGCTTCCTCGAGTTCGTCGCGGTCGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig171:8069..9652+

>mRNA_P-wetherbeei_contig171.4.1 ID=mRNA_P-wetherbeei_contig171.4.1|Name=mRNA_P-wetherbeei_contig171.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=369bp|location=Sequence derived from alignment at P-wetherbeei_contig171:8069..9652+ (Phaeothamnion wetherbeei SAG_119_79)
GTCCGCATCTCGGTGCACGTTGCGGCGCCGGCTGACCCGGCTCATCTGGC
CTTCTCGCTGGCGTACGCCATCCAGGCGTTTGAATTCTTTGCGACTCTCC
TCCAGGTGCCGTATCCGTTCCCCAAGTTGGACCTGATCGCCCTCGAGAAA
TCGCACGGCCTCGGCATGGAGCACTATGGTGCCATCACCATTGTAGAGGA
TCACCTGTTAGTGACGGAGGCGACAGACGTCACCCGGAGGCGCCGCATCC
TCCGACTCATCGGCCACGAGGTCTGCCACCAGTGGATCGGCAATCTTGTC
ACCCCGCGCAGCTTCGACGAGCTCTGGCTGAAAGAAGGCGTCGCCCGCTT
CCTCGAGTTCGTCGCGGTC
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