mRNA_P-wetherbeei_contig17081.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17081.1.1
Unique NamemRNA_P-wetherbeei_contig17081.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A0A7S3GV94_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV94_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.960e-57
Identity = 95/142 (66.90%), Postives = 117/142 (82.39%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIMRQSSAY 426
            ELREAF +FD +K+GSI +HELKVLMRALGF VKK EV+++V + DP N G+  +E    IM++ RYA+ DPEEE+ KAF+LFDDD TG+ITLKNM+RV RELGE +SEEELQA+IDEFDRDQDG IS DEF+ IM+QS+ Y
Sbjct:   22 ELREAFELFDANKTGSIDLHELKVLMRALGFDVKKPEVVKMVHDVDPSNVGSVDYEQFLEIMSD-RYASRDPEEEIRKAFQLFDDDHTGRITLKNMKRVARELGENLSEEELQAMIDEFDRDQDGEISNDEFLYIMKQSTMY 162          
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A0A7S1U7H6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 7.260e-55
Identity = 92/142 (64.79%), Postives = 113/142 (79.58%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIMRQSSAY 426
            ELREAF +FD  K+ SI +HELKVLMRALGF V+K EVL+LV   DP N+G+  F+    IM + +YA  DPEEE+ KAFRLFDDD TGKI++KNMRR+ RELGE +SEEELQA+IDEFDRD DG I++DEF+ IMR+SS +
Sbjct:   58 ELREAFDLFDSDKTSSIDLHELKVLMRALGFDVRKQEVLKLVHEVDPHNDGSVNFDQFMEIMTD-KYAERDPEEEIRKAFRLFDDDQTGKISIKNMRRIARELGENLSEEELQAMIDEFDRDNDGEINEDEFLYIMRESSDF 198          
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A0A6S9FI83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FI83_HETAK)

HSP 1 Score: 174 bits (441), Expect = 4.580e-53
Identity = 89/142 (62.68%), Postives = 113/142 (79.58%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIMRQSSAY 426
            EL+EAF +FD +K+GSI +HELKVL+RALGFPVKK EVL++V + DP N+G    +    IM +++YA  DP+EE+ KAF LFDDD +G I+ KNMRRV RELGE + +EE+QA+IDEFDRDQDG IS+DEF SIM+QSS Y
Sbjct:   34 ELKEAFTLFDANKTGSIDLHELKVLIRALGFPVKKQEVLKMVHDVDPHNDGFVDMDTYMEIM-QDKYALRDPDEEILKAFALFDDDSSGFISAKNMRRVARELGENLGDEEIQAMIDEFDRDQDGEISRDEFKSIMKQSSMY 174          
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A0A812R5A4_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R5A4_SYMMI)

HSP 1 Score: 171 bits (434), Expect = 2.740e-52
Identity = 87/142 (61.27%), Postives = 113/142 (79.58%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIMRQSSAY 426
            ELREAF +FD  K+GSI +HELKVLMRALGF VKK +++++V + DP N G+  +     IM + RYA  +PEEE+ KAF+LFDDD +G+I+L+NM+RV RELGE +SE+ELQA+IDEFDRDQDG IS DEF+ IM+QS+ Y
Sbjct:   13 ELREAFELFDADKTGSIDLHELKVLMRALGFDVKKPDIVRMVHDVDPNNSGSVDYPQFLEIMTD-RYAERNPEEEIVKAFQLFDDDHSGRISLRNMKRVARELGENLSEDELQAMIDEFDRDQDGEISADEFMYIMKQSTMY 153          
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A0A7S2BMG2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BMG2_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.410e-50
Identity = 86/142 (60.56%), Postives = 109/142 (76.76%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIMRQSSAY 426
            ELREAF +FD  K GSI +HELKVLMRALGF VKK +V++ V   DPQNEG   FE   ++M + RY   DP+EE+ KAF+LFD D +G I+LKNMR + RELGE ++++ELQA+IDEFDRDQDG I++ EF+ IM+QSS Y
Sbjct:   27 ELREAFELFDADKKGSIDLHELKVLMRALGFQVKKQDVVKFVHEIDPQNEGMVNFEQFMDLMTD-RYTERDPDEEILKAFQLFDTDGSGSISLKNMRNISRELGENLADDELQAMIDEFDRDQDGEINQAEFMYIMKQSSVY 167          
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A0A7S2V697_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V697_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.310e-50
Identity = 86/136 (63.24%), Postives = 106/136 (77.94%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIM 408
            EL+EAF +FD   +G I +HELKVL+RALGFPVKK EV++LV + DP NEG    +    IM E +YAA DPEEE+ KAF+LFDDD+T KI++ NMRRV REL E +++EE+QA+IDEFDRDQDG IS DEFI IM
Sbjct:   24 ELKEAFDLFDARHTGRIDLHELKVLIRALGFPVKKNEVVRLVHDVDPYNEGIVDMDQYMEIMQE-KYAARDPEEEIIKAFKLFDDDNTNKISMNNMRRVARELNENLNDEEMQAMIDEFDRDQDGEISLDEFIGIM 158          
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A0A8J2SDG7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDG7_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.750e-50
Identity = 86/139 (61.87%), Postives = 110/139 (79.14%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIMRQS 417
            EL+EAF +FD  KSG + IHELKVLMRALGF VKK +V++ + + +PQNEG   F L   IMAE +YA  DPEEE+ KAF+LFD D +GKI+LKNMR V  ELGE +++EELQA+I+EFDRDQDG IS++EF++IMR +
Sbjct:   13 ELKEAFDLFDHEKSGKLNIHELKVLMRALGFQVKKRDVVKCIHDIEPQNEGHVDFSLYAQIMAE-KYALRDPEEEILKAFQLFDHDGSGKISLKNMRHVAAELGEDLADEELQAMIEEFDRDQDGEISQEEFLTIMRSA 150          
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A0A7J6LXX5_PERCH (Centrin-3 n=4 Tax=Perkinsus TaxID=28000 RepID=A0A7J6LXX5_PERCH)

HSP 1 Score: 166 bits (420), Expect = 6.880e-50
Identity = 86/142 (60.56%), Postives = 111/142 (78.17%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIMRQSSAY 426
            E++EAF +FD S+SGSI  HELKV MRALGF VKK EVL+L+ + D Q  G+  ++    IM   +YA  DP EEM KAF+LFDDD TG+I+LKN+RRV RELGE +S++ELQA+IDEFD DQDG I+++EFI+IM+Q+S Y
Sbjct:   33 EIKEAFDLFDTSRSGSIDYHELKVCMRALGFDVKKAEVLELMRDYDRQQTGSIRYDDYLEIMT-TKYADRDPTEEMVKAFKLFDDDGTGRISLKNLRRVARELGENLSDDELQAMIDEFDTDQDGEINEEEFIAIMKQTSLY 173          
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A0A7S1NSJ9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NSJ9_9EUGL)

HSP 1 Score: 163 bits (413), Expect = 1.420e-48
Identity = 86/136 (63.24%), Postives = 110/136 (80.88%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIM 408
            E+REAF +FD  K+G+I  HE+KV MRALGF VKK EVL+L+ + D    G+ +F+   +IM+E + A  DP EEMAKAF+LFDDD TG+ITLKN+RRV RELGETM++EELQA+IDEFD+DQDG I++DEFI+IM
Sbjct:   52 EIREAFELFDTDKNGTIDAHEMKVAMRALGFDVKKEEVLRLMEDVDRDCTGSISFQHFSDIMSE-KIADRDPREEMAKAFQLFDDDGTGRITLKNLRRVARELGETMNDEELQAMIDEFDKDQDGEINEDEFIAIM 186          
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Match: A4VE20_TETTS (Basal body centrin protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=A4VE20_TETTS)

HSP 1 Score: 158 bits (400), Expect = 5.840e-47
Identity = 80/142 (56.34%), Postives = 109/142 (76.76%), Query Frame = 1
Query:    1 ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNEGACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVVRELGETMSEEELQALIDEFDRDQDGAISKDEFISIMRQSSAY 426
            E++EAF +FD  K+G+I  HELKV+MRALGF V+KTEV+ L+   D    G   +     IM + +Y   DP EE+ KAF+LFD+D+TGKI+L+N++RV RELGE +++EELQA+IDEFDRDQDG IS++EF+SIM+Q+S Y
Sbjct:   25 EIKEAFDLFDTEKTGTIDYHELKVVMRALGFDVRKTEVVSLIREYDKDETGRIEYNDFVEIMTQ-KYNERDPTEEILKAFKLFDEDNTGKISLRNLKRVARELGEQLTDEELQAMIDEFDRDQDGQISEEEFLSIMKQTSIY 165          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17081.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3GV94_9STRA4.960e-5766.90Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1U7H6_9STRA7.260e-5564.79Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6S9FI83_HETAK4.580e-5362.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812R5A4_SYMMI2.740e-5261.27Calmodulin n=1 Tax=Symbiodinium microadriaticum Ta... [more]
A0A7S2BMG2_9STRA1.410e-5060.56Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2V697_9STRA4.310e-5063.24Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A8J2SDG7_9STRA4.750e-5061.87Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7J6LXX5_PERCH6.880e-5060.56Centrin-3 n=4 Tax=Perkinsus TaxID=28000 RepID=A0A7... [more]
A0A7S1NSJ9_9EUGL1.420e-4863.24Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A4VE20_TETTS5.840e-4756.34Basal body centrin protein n=1 Tax=Tetrahymena the... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17081contigP-wetherbeei_contig17081:288..1435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog5911.EDK31783
PFAMsEF-hand_1,EF-hand_6,EF-hand_7
Model size429
Max annot lvl5878|Ciliophora
KEGG koko:K16466
KEGG TC1.I.1
Hectar predicted targeting categoryother localisation
Exons4
Evalue7.25e-48
EggNOG OGsCOG5126@1|root,KOG0028@2759|Eukaryota,3ZBRU@5878|Ciliophora
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-26_003440.1
DescriptionEF-hand domain
Cds size429
COG categoryDZ
BRITEko00000,ko03019,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186107.2101734-CDS-P-wetherbeei_contig17081:287..3761683186107.2101734-CDS-P-wetherbeei_contig17081:287..376Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17081 288..376 +
1683186107.221434-CDS-P-wetherbeei_contig17081:527..6321683186107.221434-CDS-P-wetherbeei_contig17081:527..632Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17081 528..632 +
1683186107.231516-CDS-P-wetherbeei_contig17081:778..8661683186107.231516-CDS-P-wetherbeei_contig17081:778..866Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17081 779..866 +
1683186107.2420611-CDS-P-wetherbeei_contig17081:1288..14351683186107.2420611-CDS-P-wetherbeei_contig17081:1288..1435Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17081 1289..1435 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17081.1.1prot_P-wetherbeei_contig17081.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17081 288..1435 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17081.1.1

>prot_P-wetherbeei_contig17081.1.1 ID=prot_P-wetherbeei_contig17081.1.1|Name=mRNA_P-wetherbeei_contig17081.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=143bp
ELREAFGIFDVSKSGSIGIHELKVLMRALGFPVKKTEVLQLVFNEDPQNE
GACTFELVQNIMAENRYAALDPEEEMAKAFRLFDDDDTGKITLKNMRRVV
RELGETMSEEELQALIDEFDRDQDGAISKDEFISIMRQSSAY*
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mRNA from alignment at P-wetherbeei_contig17081:288..1435+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17081.1.1 ID=mRNA_P-wetherbeei_contig17081.1.1|Name=mRNA_P-wetherbeei_contig17081.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1148bp|location=Sequence derived from alignment at P-wetherbeei_contig17081:288..1435+ (Phaeothamnion wetherbeei SAG_119_79)
GAGCTTCGCGAAGCCTTCGGCATCTTTGATGTTTCAAAGTCCGGCAGCAT CGGCATCCACGAGCTGAAGGTGCTCATGCGGGCGCTGGGGTGAGTTGTTC TCCTTCGTTGCTCCCATAGTAAATAGTTTGCGTTGGCTAGACGTACCTGC ATTGCTGTCTCTCTTTGACGAGGGCGCTTGGGTCTTGCATGTAGATAATA AACCGCGCCCGCTTCTCTTTTCGACCTCATAAACCTCAAGTTTTCCTGTG AAGAAGACCGAAGTACTCCAGCTCGTGTTCAACGAAGATCCCCAAAACGA GGGCGCCTGTACCTTCGAGCTCGTTCAAAATATCATGGCCGAAAAGTGAG GAACGCTGATATTTTGATTGTTCGCTTTTATGGGCTTCAATGGGGGTGGC TGTCATGATCTTTTTAACGCGTAAGATAAAGCTCTGGCTGCAGAGGGCTC GCGGTGTTCTGACGAGACATTCCCCCTTTCTGGTGTACGAGCAGATACGC TGCACTCGATCCAGAGGAGGAGATGGCCAAGGCCTTCCGACTGTTTGATG ACGACGACACCGGAAAGATCACCCTGAAGGTGTGTGAATGGAAGTTCGAA ACGCTCGGCTTGAGTGGGAAAAGACCCGGGCGTTTTGCTGCCTGCATCGT TAGCCGATTGTGGAGCGAGTGATTGTGCGGGTATTTTTGAAATTGCTTGC GGGCCCTTGGGCCGCTTTCACTCCTGAAAGTGTGTGCAGTACGGGCGCGG GGCGGCGCTCTCGCTTCAGGTGTTGCCGGAATCACAGATTGGCGGGCTGA AGAGAGAGGATGGCTACTTCTTTAAGGGCGGTTGTTTGTCTTTTGCGTTT AGCCGCAATCTTTAGCATCTCCAGATTTGCCGTGCCCCGAGACACAGATG CACGGGTCCGGTTGATCGAGGGGTTCGTGGACTACCGTCTGACGATTCGC TTTGAAGAAATCTAAAGGAACGAACGGAGAACTTGCCTTGCCGCCGCACA GAACATGCGACGAGTGGTGCGGGAGCTCGGCGAAACCATGTCGGAAGAGG AACTCCAAGCCTTAATCGACGAATTCGACAGAGACCAAGACGGGGCCATT AGCAAGGACGAGTTCATCTCCATCATGCGACAGTCCAGCGCGTACTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17081:288..1435+

>mRNA_P-wetherbeei_contig17081.1.1 ID=mRNA_P-wetherbeei_contig17081.1.1|Name=mRNA_P-wetherbeei_contig17081.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=429bp|location=Sequence derived from alignment at P-wetherbeei_contig17081:288..1435+ (Phaeothamnion wetherbeei SAG_119_79)
GAGCTTCGCGAAGCCTTCGGCATCTTTGATGTTTCAAAGTCCGGCAGCAT
CGGCATCCACGAGCTGAAGGTGCTCATGCGGGCGCTGGGTTTTCCTGTGA
AGAAGACCGAAGTACTCCAGCTCGTGTTCAACGAAGATCCCCAAAACGAG
GGCGCCTGTACCTTCGAGCTCGTTCAAAATATCATGGCCGAAAACAGATA
CGCTGCACTCGATCCAGAGGAGGAGATGGCCAAGGCCTTCCGACTGTTTG
ATGACGACGACACCGGAAAGATCACCCTGAAGAACATGCGACGAGTGGTG
CGGGAGCTCGGCGAAACCATGTCGGAAGAGGAACTCCAAGCCTTAATCGA
CGAATTCGACAGAGACCAAGACGGGGCCATTAGCAAGGACGAGTTCATCT
CCATCATGCGACAGTCCAGCGCGTACTAA
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