mRNA_P-wetherbeei_contig1708.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: D8LE53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE53_ECTSI) HSP 1 Score: 112 bits (280), Expect = 2.360e-25 Identity = 53/120 (44.17%), Postives = 79/120 (65.83%), Query Frame = -1
Query: 411 FERASEAYAMDNPYAKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQCKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNH 770
+R+ A ++ + +P N PY QQ L+SW+PLLT ++ G Y+ I ++F+ +G V+ + D V++ YQYDGD SDGD CKIT+ E L C I+F++ + I P YV+YE+ FYQNH
Sbjct: 1 MDRSQAAELIEPELSNKPANRPYYQQTLRSWSPLLTPWRAVGGYLLIGLIFVPLGAVLWHDKDVVELR-YQYDGDGSDGDDCKITTYKENLDCTITFDVEKDIPGPAYVYYELTNFYQNH 119
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: W2NTE7_PHYPR (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2NTE7_PHYPR) HSP 1 Score: 99.0 bits (245), Expect = 2.710e-20 Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = -1
Query: 405 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDD--------SDGDQCKITSQDEGLS-------CQISFNITETIDAPVYVFYEIDKFYQNHRR 728
+++P +TP+ QQ+LK+W P+LT + G + + ++F+ IG V+ ESDNV Y QYDGDD G C ++ + EG S C+I+F I + + APVY++Y++D FYQNHRR
Sbjct: 5 SRKPEDTPFKQQKLKAWQPILTPNWVIGTFAVVGLIFIPIGIVLHTESDNVVEYSIQYDGDDMTSSSNIVDQGSGCYLSDESEGDSFDVEEHGCRITFKIEKEMKAPVYLYYQLDNFYQNHRR 127
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: A0A6S9FRN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FRN7_HETAK) HSP 1 Score: 97.8 bits (242), Expect = 5.530e-20 Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = -1
Query: 405 NPYAKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQCKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRR 737
N +RP + + QQRLK+W P+LT + + I VLF+ IG SD V Y QYDGD SD C ITS +G C ++FNI + +D PVY++Y++ FYQNHRR
Sbjct: 6 NSQERRPEESAFKQQRLKAWKPVLTPKWVVSSFAVIGVLFIIIGIAAKVSSDAVTEYKIQYDGDSSD--PCTITSYKQGRECSLTFNIDKDMDGPVYLYYQLTNFYQNHRR 114
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: A0A0W8DZW1_PHYNI (Cyclin-dependent kinase 20 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DZW1_PHYNI) HSP 1 Score: 99.0 bits (245), Expect = 7.700e-20 Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = -1
Query: 405 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDD--------SDGDQCKITSQDEGLS-------CQISFNITETIDAPVYVFYEIDKFYQNHRR 728
+++P +TP+ QQ+LK+W P+LT + G + + ++F+ IG V+ ESDNV Y QYDGDD G C ++ + EG S C+I+F I + + APVY++Y++D FYQNHRR
Sbjct: 5 SRKPEDTPFKQQKLKAWQPILTPNWVIGTFAVVGLIFIPIGIVLHTESDNVVEYSIQYDGDDMTSSSNIVDQGSGCYLSDESEGDSFDVEEHGCRITFKIEKEMKAPVYLYYQLDNFYQNHRR 127
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: A0A7S2D039_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D039_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.560e-19 Identity = 48/114 (42.11%), Postives = 75/114 (65.79%), Query Frame = -1
Query: 405 DNPYAKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQ--CKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRR 740
+N +++P +T + QQRL +W P+LT + G +++I LFL +G VI SD++ I QYDG ++ Q CK+++ G CQI+F E ++AP+YV+Y+ID FYQNHR+
Sbjct: 3 ENGGSRKPADTAFRQQRLPAWQPILTPNAVIGFFLAIGTLFLILGIVIQQASDSIVEKIVQYDGSGTNSAQSDCKLSN---GGDCQITFTAPEKMEAPIYVYYQIDNFYQNHRK 113
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: A0A3R7HW45_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HW45_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.570e-19 Identity = 52/125 (41.60%), Postives = 76/125 (60.80%), Query Frame = -1
Query: 405 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGD-----DSD-----GDQCKITSQDEGLS-------CQISFNITETIDAPVYVFYEIDKFYQNHRR 728
+++P +TP+ QQ+LK+W P+LT + G + + ++F+ IG V+ ESDNV Y QYDGD DS G C + +DEG S C+I+F I + APVY++Y++D FYQNHRR
Sbjct: 5 SRKPEDTPFKQQKLKAWQPILTPNWVIGTFAVVGLIFIPIGIVLHTESDNVVEYSIQYDGDGMSTADSSNIVDLGSGCYLGDEDEGDSFDVDEHGCRITFKIDRDMKAPVYLYYQLDNFYQNHRR 129
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: A0A2P4XM33_9STRA (CMGC/CDK protein Kinase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XM33_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.300e-19 Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = -1
Query: 405 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSD--------GDQCKITSQDEGLS-------CQISFNITETIDAPVYVFYEIDKFYQNHRR 728
+++P +TP+ QQ+LK+W P+LT + G + + ++F+ IG V+ ESDNV Y QYDG+ GD C ++ +DEG + C+I+F I + + APVY++Y++D FYQNHRR
Sbjct: 5 SRKPEDTPFKQQKLKAWQPILTPNWVIGTFAVVGLIFIPIGIVLHTESDNVVEYSIQYDGEGVTESSNIVDIGDGCYLSDEDEGDTFDVDTHGCRITFKIEKEMKAPVYLYYQLDNFYQNHRR 127
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: A0A7S3Q2P2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2P2_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 4.730e-19 Identity = 49/110 (44.55%), Postives = 68/110 (61.82%), Query Frame = -1
Query: 408 KRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSD----GDQCKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHR 725
+ P +T QQR+K+W P+L + ++ I LF+ G+ + SDNVK Y QYDG D D G C I +EG CQISFN+TE ++AP+ V+YEI+ F+QNHR
Sbjct: 13 REPEDTDVRQQRVKAWNPILDPVYVILGFLGIGALFIPTGWKLRQISDNVKEYGLQYDGPDEDFDDDGSPCAIGVANEGRKCQISFNVTEEMEAPIMVYYEIENFHQNHR 122
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: K3WM57_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM57_GLOUD) HSP 1 Score: 95.5 bits (236), Expect = 4.810e-19 Identity = 47/125 (37.60%), Postives = 78/125 (62.40%), Query Frame = -1
Query: 405 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSD----------GDQCKITSQDEGLS-------CQISFNITETIDAPVYVFYEIDKFYQNHRR 728
+++P +TP+ QQ+LK+W P+LT + G + + ++F+ IG ++ ES+NV Y QYDG D++ GD C + ++ EG + C ++F+I + + APVYV+Y++D FYQNHRR
Sbjct: 5 SRKPEDTPFKQQKLKAWQPILTPNWVIGSFALVGLIFIPIGIILHTESENVVEYSIQYDGQDANSTASSNIRGFGDGCYLAAESEGNAFNYSTRGCLLTFDIQKDMKAPVYVYYQLDNFYQNHRR 129
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Match: A0A6H5JEE3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEE3_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 6.160e-19 Identity = 41/108 (37.96%), Postives = 72/108 (66.67%), Query Frame = -1
Query: 405 AKRPPNTPYAQQRLKSWTPLLTSYKLAGIYMSIAVLFLTIGFVILDESDNVKMYIYQYDGDDSDGDQCKITSQDEGLSCQISFNITETIDAPVYVFYEIDKFYQNHRR 728
++RP +TP+ QQR+ S+ P+L + GI+ +I V F+ +G ++ES+ V + +YDGD D + CKIT +++G +C + + E + P+YV+YE++ ++QNHRR
Sbjct: 28 SRRPKDTPFRQQRVTSFLPILQPLLVVGIFFAIGVAFIPLGKWFIEESEEVVEFKRRYDGDSVDVEGCKITERNQGTTCSVQIEVDEFMKPPIYVYYELNNYFQNHRR 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1708.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1708.3.1 >prot_P-wetherbeei_contig1708.3.1 ID=prot_P-wetherbeei_contig1708.3.1|Name=mRNA_P-wetherbeei_contig1708.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp LAVRRHVPGAVVAIKGVAGEDGEAEDGISQVEGERRGTLLFLACSFRYSAback to top mRNA from alignment at P-wetherbeei_contig1708:5443..6255- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1708.3.1 ID=mRNA_P-wetherbeei_contig1708.3.1|Name=mRNA_P-wetherbeei_contig1708.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig1708:5443..6255- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1708:5443..6255- >mRNA_P-wetherbeei_contig1708.3.1 ID=mRNA_P-wetherbeei_contig1708.3.1|Name=mRNA_P-wetherbeei_contig1708.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig1708:5443..6255- (Phaeothamnion wetherbeei SAG_119_79)back to top |