mRNA_P-wetherbeei_contig1708.2.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: A0A835Z355_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z355_9STRA) HSP 1 Score: 322 bits (824), Expect = 9.860e-100 Identity = 201/427 (47.07%), Postives = 249/427 (58.31%), Query Frame = 3
Query: 654 TTGGTLSTASSFERVLDGLGDSDKYNAVLQVGLSLFCLQKKKTRKSRCIEHRVSYPRRSHAPVLSLQACTFRPGSIYTRLLPQGLAGMAL---GKERGGAKGGRGAPLEDILQLLAEMREGGVRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAGQKYGRDLTRLAPLPSDERRRQRAMAGLPTVPLDERGVEVGYAGAFLGVVGLDLGAGGLESVLHYDATVPTLMAAATAAAVALDVFQRSGEISKQVLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEAVRMLQ-RPELRGGMGAGTGTSLDSPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGL--GGGADALDPADDAARLDWAYNEARVLLRDNAAAFDALRQRLETGGSTVGECATLIERQR 1916
+ G +L + SF+RVLD L D D+YNAVLQ GLAG+A+ GK+R ++L+LL EM + + C+ RS GAV+DAAA+T GA QK+ R+LTRLAPLP DERRR RA+ L P D+RG ++ +AGAFLGVVG D GL VL +DATVP +++ ATA AVALD+FQ E S++VL G++RLFTRDV RESR EA AFL GYLTGLPCFAF+PNV EA+RM++ PEL+ +G GAHR LVWLL+ VA E HRQLI SD RQA FL + R++GL G A D DD + WA+NEAR LLRDN F+ALRQRLETGG+TVGEC +LI+R R
Sbjct: 13 SAGSSLVVSKSFDRVLDSLSDQDRYNAVLQ-----------------------------------------------------GLAGIAVSSSGKDR----------FVELLKLLDEMADRNIGCTTRSGGAVVDAAASTAEVAKVATAMSKLRRTGAAQKFSRELTRLAPLPLDERRRARALKDLVPTPSDDRGGDLMHAGAFLGVVGFDFAGDGLAPVLDFDATVPAILSLATAGAVALDIFQGGAERSRRVLAGLSRLFTRDVSRESRAEAGAFLAGYLTGLPCFAFKPNVLEALRMVEGMPELKEAFQSG------GAGGAHRTLVWLLSAVAGEHLTHRQLIVSDPRQATTFLLLARERGLLPSCGDAAADAEDDEMAVRWAFNEARELLRDNEGMFEALRQRLETGGATVGECVSLIDRYR 370
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: D8LH72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH72_ECTSI) HSP 1 Score: 313 bits (802), Expect = 2.070e-96 Identity = 187/424 (44.10%), Postives = 250/424 (58.96%), Query Frame = 3
Query: 642 AITPTTGGTLSTASSFERVLDGLGDSDKYNAVLQVGLSLFCLQKKKTRKSRCIEHRVSYPRRSHAPVLSLQACTFRPGSIYTRLLPQGLAGMALGKERGGAKGGRGAPLEDILQLLAEMREGGVRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAGQKYGRDLTRLAPLPSDERRRQRAMAGLPTVPLDERGVEVGYAGAFLGVVGLDLGAGGLESVLHYDATVPTLMAAATAAAVALDVFQRSGEISKQVLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEAVRMLQRPELRGGMGAGTGTSLDSPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGLGGGADALDPADDAARLDWAYNEARVLLRDNAAAFDALRQRLETGGSTVGECATLIERQ 1913
A T GG L +S ERV++GLG+++KYNAVLQ G++ + +GK++ G RGA E++ QLL EM ++CS R+A AV+DAA AT AG GQK+ RDL RL+ LP++ ++++A+ GL VP D+R E+GYA +F+ +VG D G+ V+HYD T+PT++ A TAAAV +DV++RSG SK VL G+NRLF +DVERESR EA AFL Y+TGLPCFAF+P+ EA+RM P+++ G G HR+LVWLLA VA E VHRQ+I SD RQA AFL M R + G LDP DD+ R+ WA+NEAR LL+DN AF+ALR+RLE GG+TVG+C ++IER+
Sbjct: 17 AATTAAGGGLVKTASLERVMEGLGENEKYNAVLQ-----------------------------------------------------GVSSIVMGKKKVG-DAARGA-FEEVFQLLDEMHANRIKCSIRTASAVVDAATATTDIGIITKVFSKIRRAGVGQKFSRDLGRLSLLPTEASKKEKALRGLVPVPDDDRAQEIGYAASFMVLVGSDFSWEGIGQVMHYDTTIPTVIGAVTAAAVGIDVWKRSGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMKETFLNGNGV--------HRILVWLLAGVAGEGLVHRQMIASDPRQAFAFLQMVRNREDG---FELDPEDDSERVQWAFNEARALLKDNEGAFEALRRRLEGGGATVGDCVSIIERR 374
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: A0A7S2H157_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H157_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.440e-46 Identity = 120/332 (36.14%), Postives = 173/332 (52.11%), Query Frame = 3
Query: 972 DILQLLAEMREGGVRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAGQKYGRDLTRLAPLPSDERRRQRAMAGLPTVPLDERGVEVGYAGAFLGVVGLDLGAGGLESVLHYDATVPTLMAAATAAAVALDVFQRSGEISKQ------------------VLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEAVRMLQRPELRGGMGAGTGTSLDSPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGLGGGADALDPADDAARLDWAYNEARVLLRDNAAAFDALRQRLETGGSTVGECATLIERQ 1913
D+ LL EM G + + ++ A+LD AA T G +Y D+ ++ P P ER+R + LP VP+D R +EV +A +F+ + +G G + +LH + VPT + D F ISK +L G+NRLFTRD+ RE RCEAA+FL Y+ GLP F+ P EA+++ ++ SL + AG +R+LVWLLA VA E A HRQLI SD R A A L + R++G+ D + DDA R+ A ++A +LL + A DALR+R+E+G +TVG C L+E+Q
Sbjct: 105 DVWPLLEEMTAAGKKMAIKTRAALLDVAAGTEDINAVDNSLKLSRRNGVLARYSMDVPKVLP-PLVERQRDKLDRTLPEVPIDSRELEVTFALSFVAFISASVGWGSIAPILHQEPLVPTWATFVAVLLLLADNFNALVSISKDGNFQLATLPQIGGDGTRVLLAGLNRLFTRDLTRECRCEAASFLVAYVLGLPSFSLNPTTLEAIKLTDVEPIK--------ESLMTDAGINRILVWLLASVAVENAQHRQLIVSDPRNAPALLRLLRERGV----DVGEEEDDALRVRHALSQADLLLTRHGATLDALRERMESGAATVGNCVGLLEKQ 423
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: A0A0G4G463_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G463_VITBC) HSP 1 Score: 175 bits (444), Expect = 2.170e-44 Identity = 118/325 (36.31%), Postives = 172/325 (52.92%), Query Frame = 3
Query: 954 RGAPLEDILQLLAEMREGGVRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAGQKYGRDLTRLAPLPSDERRRQRAMAGLPTVPLDERGVEVGYAGAFLGVVGLDLGAGGLESVLH--YDATVPTLMAAATAAAVALDVFQRSGEISKQVLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEAVRMLQRPELRGGMGAGTGTSLDSPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGLGGGADALDPADD---AARLDWAYNEARVLLRDNAAAFDALRQRLETGGSTVGECATLIERQ 1913
R + L++ LL EMR+ ++ +PR+ ++DAAA T +G YG+ P D R L +P D R +V A AF+G VG +GA L ++ +D PT+ A AAA D+ + G +SK V+ G+ RL D ER+ R E+AAFL YL GLPCF F PNV EA++M + P +R L +PAG ++LVWLLA VAAE H + I +D RQ+ AF+ + R + D L DD + R+ WA+++A LLR + D LR+R+E+ +TVG+C T +E++
Sbjct: 110 RQSSLQEGWTLLDEMRQKALKATPRTFSLLVDAAAVTNDAEAMKRSLELATGSGLSVVYGQADKGWEGSPVDAGRLASVTESLTDMPEDSRSKDVVVASAFMGYVGTGVGAETLGDYIYGDFDEIYPTVALLALAAAGVYDIVKGGGVVSKSVVAGLKRLLVDDKERQCRVESAAFLVAYLLGLPCFCFRPNVLEALKMAEDPRIR--------MDLLTPAGIDKLLVWLLAGVAAENLQHPECIVADPRQSDAFVKLMRDK------DYLKGVDDETASLRVKWAFHKATNLLRKHRRVHDELRRRMESKAATVGDCVTFLEKE 420
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: A0A4D9D6H3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6H3_9STRA) HSP 1 Score: 172 bits (437), Expect = 6.200e-44 Identity = 121/329 (36.78%), Postives = 169/329 (51.37%), Query Frame = 3
Query: 924 GKERGGAKGGRGAPLEDILQLLAEMREGGVRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAGQKYGRDLTRLAPLPSDERRRQRAMAGLPTVPLDERGVEVGYAGAFLGVVGLDLGAGGLESVLHYDATVPTLMAAATAAAVALDVFQRSGEISKQVLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEAVRML-QRPELRGGMGAGTGTSLDSPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGLGGGADALDPADDAARLDWAYNEARVLLRDNAAAFDALRQRLETGGSTVGECATLIE 1907
G+ GG+ + +L+ EM + +R + RS A++DAA+ + G + + R + L P P R L VP D R E+ A L VVG L + +LH D T +++ A D+ QR G+ L G+NRLF RD ER++ +AA FL YL GLPCF F PNV EAVRM Q P +L S AG +R+LV+LLAPVA E A + QL+ SDARQA A L + +G G + ++ L WAY EA+ LLR ++A + L+QR+E+GG+TVG+C L+E
Sbjct: 55 GRGMGGSSRSTSEAFTPLYKLVEEMTDKDMRITLRSFAALIDAASLSRDLNVIQECLLLARRNGVSRAFARSVGALNPPPPLRAASDRY--DLSPVPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTTAASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAF--------AETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVYMGRGEARGQEG---REEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 370
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: W7U4H7_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4H7_9STRA) HSP 1 Score: 170 bits (431), Expect = 6.070e-42 Identity = 120/329 (36.47%), Postives = 168/329 (51.06%), Query Frame = 3
Query: 924 GKERGGAKGGRGAPLEDILQLLAEMREGGVRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAGQKYGRDLTRLAPLPSDERRRQRAMAGLPTVPLDERGVEVGYAGAFLGVVGLDLGAGGLESVLHYDATVPTLMAAATAAAVALDVFQRSGEISKQVLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEAVRML-QRPELRGGMGAGTGTSLDSPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGLGGGADALDPADDAARLDWAYNEARVLLRDNAAAFDALRQRLETGGSTVGECATLIE 1907
G+ GG + +L+ EM + +R + +S A++DAA+ + G + + R + L P P R L VP D R E+ A L VVG L + +LH D T +++ A D+ QR G+ L G+NRLF RD ER++ +AA FL YL GLPCF F PNV EAVRM Q P +L S AG +R+LV+LLAPVA E A + QL+ SDARQA A L + +G G + ++ L WAY EA+ LLR ++A + L+QR+E+GG+TVG+C L+E
Sbjct: 186 GRGMGGNSRSTSEAFTPLYKLVEEMTDKDMRITLKSFAALIDAASLSRDLNVIQECLLLARRNGVSRAFARSVGTLNPPPPLRAASDRY--DLSPVPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTTAASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAF--------AETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVFMGRGEARGQEG---REEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 501
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: R1DV44_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DV44_EMIHU) HSP 1 Score: 138 bits (347), Expect = 2.120e-32 Identity = 114/314 (36.31%), Postives = 148/314 (47.13%), Query Frame = 3
Query: 1011 VRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAGQKYGRDLTRLAPLPSDERRRQRAMAGLPTVPLDERGVEVGYAGAFLGVVGLDLGAGGLESVLHYDATVPT--------LMAAATAAAVALDVFQRSGEISKQVLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEAVRMLQRPELRGGMGAGTGTSLDSPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGLGGGADALDPA------DDAARLDWAYNEARVLLRDNAAAFDALRQRLETGGSTVGECATLIER 1910
+R +P S A+LDA A + GA + + RL+ PS A++ L +P D R EV +A F GV+ L GGLE V D +P L+A A D + R GE + + RG++RLF+RDV RES EAA+F+ GYL GLP AF P V +L G AG G P A RVLVWLL+PVAAE A + + S AA FL R++ G D + D RL WA+ EA+ LL NAAA AL+ ++ G S G L ER
Sbjct: 6 LRVAPESCRALLDATARSDGLPLFLSALSACRANGACRAFAS--ARLSSRPS-------AVSALAPLPEDSRAAEVSFAVGFSGVL---LALGGLEFVDLLDPVLPGETEAPPLWLLAGGLAGVWGFDRYSRRGEGAASLARGLSRLFSRDVTRESTAEAASFVSGYLLGLPSCAFTPTAVRPVELLAAASDALGGAAGGG----QPRLADRVLVWLLSPVAAEVAAYGDVTISRPALAAQFLQAARRREASAGVDVQEGGWGEGEEADEVRLRWAFGEAKRLLAANAAAQQALQDQMAAGASVGGSVLLLEER 303
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: B7GB00_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GB00_PHATC) HSP 1 Score: 134 bits (336), Expect = 1.640e-29 Identity = 122/371 (32.88%), Postives = 168/371 (45.28%), Query Frame = 3
Query: 966 LEDILQLLAEMREGGVRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAGQKYGRDLTRLAPLP-----------SDERRRQRAMAGLPTVPLDERGVEV-------GYAGA--FLGVVGLD-------------LGAGGLESVLHYDATVPTLMAAATAAAVALDVFQR-----------SGEISKQVLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEA-VRMLQRPELRGGMGAGTGTSLDSPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGLGGGADALDP--ADDAA----------RLDWAYNEARVLLRDNAAAFDALRQRLETGGSTVGECATLIE 1907
L+D LL EM ++ SPRS A++D+ G+ +YG + PLP + R ++ + +P DERG EV AG F V G+D + G L++ T +++A A A D F+ SG+++ V+RG RL T D ERES CEA+A L Y TGLPCFA+ PN EA V +++ + GM SL S AG RVLVWLLAPVAAE+A I S+ R+A +FLD + A DP AD+ L WAY EA +LLR+N + +RL G +TVG+C ++E
Sbjct: 138 LKDPTNLLNEMNSRRIQASPRSMMALIDSTVKAQDAQTMAQMLSLSVRNGSVTRYGVRQADILPLPLAATSRVKCPDGSMKTRSERLSTVADIPFDERGTEVKNAFGVTAVAGGCFFTDVAGMDDIAPFANVFLSTLIVVGALDNFYDLFKTSTSMIAKQVAKNGAAD-FELPEKDALPFGLGSGQLTGSVVRGFARLLTTDAERESLCEASALLTAYCTGLPCFAYRPNALEASVLVVESTKNSNGMD-----SLLSSAGIMRVLVWLLAPVAAESAKFPVCIVSNPREAESFLDRLEEFA------AKDPSLADEIFWTGNKQERKDLLKWAYTEADLLLRENRKILQEVTERLTGGAATVGDCIAVLE 496
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: A0A7S2KXP3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXP3_9STRA) HSP 1 Score: 129 bits (323), Expect = 9.540e-29 Identity = 116/360 (32.22%), Postives = 166/360 (46.11%), Query Frame = 3
Query: 960 APLEDILQLLAEMREGGVRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAG--QKYGRDLTRLAPLPSDERRRQRAMAGLPTVPLDERGVEVGYAGAFLGVVGLDLGAGGLESVLH-YDA-TVPTLMAAATAAAVALDVFQR--------------------------SGEISKQVLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEA----VRMLQRPELRG---GMGAGTGTSLD---SPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGLG---GGADALDPADDAARLDWAYNEARVLLR-DNAAAFDALRQRLETGGSTVGECATLIE 1907
A LE+ L+LL EM V + R+ A+LD A + YG+ L P+++ ++Q+ ++ +P +P D+R E+ A + L V A L + DA +P L+ A + LD F +G+++ + G NRLFT D ER EAAAFL Y GLPCFAF+PN EA + Q+P T+LD S G ++L+WL APVA E + H QL+ SD R+AA+FLD R + G + A+D ADD + WAY EA +L R DN AL + L +G ST+G+ +IE
Sbjct: 3 AKLEEPLKLLVEMNSRNVPVTYRACSALLDVAGSCEDVQVMSTVMTLLRRNRDSPINNYGQRQRDLTQYPTNQPKKQQRLSNVPKIPTDDRASEISSALSVLSVAAACFLADPLAKLFGGTDAGPLPNLVLFAIISVGVLDNFYDVLSGTANLVDKAPKMPEKGNLPLGLGNGQLTSNFVAGFNRLFTEDTERACEAEAAAFLAAYSLGLPCFAFQPNALEAAILAIESSQQPATDDPNINYLPPNSTNLDPLLSNEGVIKLLIWLYAPVAYENSKHPQLLYSDPREAASFLDRIRNKLSSSNIGHSVAIDEADDLMK--WAYAEADMLQRQDNGQKLQALSEGLASGASTLGDIVGIIE 360
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Match: A0A7S1UY03_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UY03_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.560e-28 Identity = 114/364 (31.32%), Postives = 156/364 (42.86%), Query Frame = 3
Query: 966 LEDILQLLAEMREGGVRCSPRSAGAVLDAAAATXXXXXXXXXXXXXXXAGAGQKYGRDLTRLAPLPSDER-------------RRQRAMAGLPTVPLDERGVEVGYAGAFLGVVGLDLGAGGLESVLHYDATVP---TLMAAATAAAVALDVFQ-------------------------------RSGEISKQVLRGVNRLFTRDVERESRCEAAAFLGGYLTGLPCFAFEPNVFEAVRMLQRPELRGGMGAGTGTSLDSPAGAHRVLVWLLAPVAAEAAVHRQLICSDARQAAAFLDMCRKQGLGGGAD---ALDPADDAARLDWAYNEARVLLRDNAAAFDALRQRLETGGSTVGECATLIE 1907
LED L LL EM V+ S RS +++DA T G +KYG L PLP+ R++R L +P D+RG EV A F+ G+ GL +VL D P TL+ V + + +G ++ V+RG+ RL ++D R+ +CEAA+F Y GLP FAF PN EA ++ L +L S G +VLVWL+AP A EAA H QLI SD R+ A L +QG A A + A L WAY EA +LLR+N L +RL G +T+G+ ++E
Sbjct: 109 LEDPLSLLKEMNLRRVKASGRSLMSMVDATVKTEDASAMAQVLSLCLKNGGVRKYGAQQQDLTPLPNTPTGRFRNPVDGKRITRKERLDNVLVDIPTDDRGSEVAAALTFMSFAGVC----GLTNVLGIDDWAPYTNTLLTGLVLVGVVDNFYDFIKFGTSLLKEKTPEKVNVKLPDKGDLPGGLGTGALTGNVVRGLTRLTSKDTLRDCQCEAASFFAAYALGLPSFAFRPNALEAAVLV----LESAKKENNLDTLLSNVGILKVLVWLMAPAAMEAAKHPQLIVSDPREGAGLLRRLEEQGGDDTASLFWAASEEEQADLLKWAYGEADLLLRNNQQTVKELSERLAGGAATMGDLCAVVE 464 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1708.2.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1708.2.4 >prot_P-wetherbeei_contig1708.2.4 ID=prot_P-wetherbeei_contig1708.2.4|Name=mRNA_P-wetherbeei_contig1708.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=528bp MPPVRKVVCLLVLGGASGFSPSVTLPAVKARGKELVAVGSNSGGGGGGDGback to top mRNA from alignment at P-wetherbeei_contig1708:1636..4807+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1708.2.4 ID=mRNA_P-wetherbeei_contig1708.2.4|Name=mRNA_P-wetherbeei_contig1708.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3172bp|location=Sequence derived from alignment at P-wetherbeei_contig1708:1636..4807+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1708:1636..4807+ >mRNA_P-wetherbeei_contig1708.2.4 ID=mRNA_P-wetherbeei_contig1708.2.4|Name=mRNA_P-wetherbeei_contig1708.2.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1584bp|location=Sequence derived from alignment at P-wetherbeei_contig1708:1636..4807+ (Phaeothamnion wetherbeei SAG_119_79)back to top |