mRNA_P-wetherbeei_contig1707.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1707.1.1
Unique NamemRNA_P-wetherbeei_contig1707.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: D7FUY8_ECTSI (Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY8_ECTSI)

HSP 1 Score: 718 bits (1854), Expect = 2.660e-249
Identity = 371/561 (66.13%), Postives = 434/561 (77.36%), Query Frame = 1
Query:  295 SLLTPDPIDFDVTWAQLKAALTAILTDLGTGFPNDLWMKLYSNVYYLCTKPLDPQHAKLYWKLKELLEEFVDSVKRRLMAYD-AGRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDLGPDGVVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAG--ETTNPSMLALQQVVRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFKESKLDDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEWQER 1968
            +LLTP+PIDFD TW  L+++L  IL DLG GFPNDLW+ LY+ VY LCTKP+DPQH+KLY +LKE LE +V  V + L+A+D A   S+TELL RYR +F NY+ GM YGS  F YLDRHWI TNHCETG SP++GVY V EM+L+VWK+RVF  LK RLR + +K I+AARERN+ +L  +  VRS+L TYETLGFEKRDRS LFQ ELEDF+V DT  Y+SRRG  +LQ+M VPRYLQEVERYL EEASRC SFVGSY+ARRILVAAQEALI AH+ RLV+EAR MLSA PE+R DL RLFTLISYL+DG+T+ G     N +M AL++VVRDH+RS GL VV+DLQA G  MDV+D+++                              P   G    VTSDDVV AML+VYEHYK L+A+SF  S GFR VLDEACK+FVNAVP+A EWLARYAHCLLD+GFKESK+D+G R+ +LD VGFLF YIADKDIFH+YYSKLLSKRIIQLTSVSDEAEERML NMR++SGFE+TSKLQRMFVDK LS  LHTGYVEWQ R
Sbjct:    2 TLLTPEPIDFDDTWVLLESSLITILQDLGQGFPNDLWISLYTGVYKLCTKPMDPQHSKLYARLKETLELYVAGVLKGLLAFDNATAHSYTELLVRYRTSFHNYSVGMHYGSDWFKYLDRHWINTNHCETGVSPKEGVYFVREMSLMVWKERVFEALKERLRHNTMKVINAARERNLSNLDDNDAVRSLLKTYETLGFEKRDRSHLFQTELEDFLVTDTGRYYSRRGSDLLQHMSVPRYLQEVERYLQEEASRCESFVGSYSARRILVAAQEALIKAHSSRLVEEARGMLSASPEKRVDLRRLFTLISYLEDGETRGGGGAVENNAMKALEEVVRDHVRSVGLTVVKDLQAKGA-MDVSDDEA----------------------GVRDNDLLPAGGGKAAVVTSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDEGTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKTLSRDLHTGYVEWQVR 539          
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: A0A835YSZ1_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ1_9STRA)

HSP 1 Score: 621 bits (1601), Expect = 8.950e-211
Identity = 350/570 (61.40%), Postives = 419/570 (73.51%), Query Frame = 1
Query:  295 SLLTPDPIDFDVTWAQLKAALTAILTDL-GTGFPNDLWMKLYSNVYYLCTKPLDPQHAKLYWKLKELLEEFVDSVKRRLMAYDAGRSSHT-ELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDLGPDGVVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAGETT-----------NPSMLALQQVVRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFKESKLDDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEWQE 1965
            SLL+P+PIDFD TW  L+++L  IL D     FPNDLWM LY+ VY LCTKP+D Q  KLY+KLKE+LE++VD V + L+AY+A  +  + +LLARYR AF+NYA GM Y + +F+YLDRHW+ATNHCETGRSP+DGVY V EMAL+VWK+  F  LKV+LR+ I+  ++AARER+   L   G VR +LATYE LG E+RDRS LFQ ELED +V D + YF+RRG  +L   PV  YL+ VE +L  E  RCA   G  TARRIL++AQ ALI  H+ERLV+EA+ MLSA PEQR DL RL+TLISYLDD     G              NPSM ALQ VV++HIR++GL  VRD QA                A       XXXXXXXXXXXXXXXXXX XX G     TSD+VV AML+VY+HY+ LV ESF ++A FR VLDEACKAFVNA+P APEWLAR+AHCLLDR F+ES++++ AR  ALDRVGFLF YIADKD+FH+YY+KLLSKRIIQLTSVS++AEERML NMRR+SGFEFTSKLQRMFVDK LS  LHTGY+EW E
Sbjct:    2 SLLSPEPIDFDETWGLLESSLLTILMDFPNKNFPNDLWMTLYTGVYKLCTKPMDAQPGKLYFKLKEVLEDYVDGVLQGLLAYEACTAHCSLDLLARYRGAFDNYATGMGYAADIFSYLDRHWVATNHCETGRSPQDGVYTVYEMALVVWKELAFESLKVKLRNHIMAVLNAARERDAPSLDDGGAVRGVLATYEALGMERRDRSALFQRELEDHLVADAKRYFARRGTALLAAAPVAAYLRAVEGFLAAEGGRCACAFGPLTARRILISAQVALIGQHSERLVEEAKRMLSAVPEQRDDLRRLYTLISYLDDDAETPGAGVLAGGGPLVLIDNPSMAALQHVVQEHIRAQGLLAVRDAQATV--------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPTAATSDEVVAAMLRVYQHYRGLVGESFMNAAAFRGVLDEACKAFVNAMPSAPEWLARHAHCLLDRSFRESRIEEDARREALDRVGFLFAYIADKDVFHKYYAKLLSKRIIQLTSVSNDAEERMLDNMRRISGFEFTSKLQRMFVDKTLSRDLHTGYMEWLE 557          
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: A0A6V1QSV4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QSV4_HETAK)

HSP 1 Score: 376 bits (966), Expect = 5.690e-116
Identity = 217/574 (37.80%), Postives = 326/574 (56.79%), Query Frame = 1
Query:  295 SLLTPDPIDFDVTWAQLKAALTAILTDLGTGFPNDLWMKLYSNVYYLCTKPLDPQHAKLYWKLKELLEEFVDSVKRRLMAYDAGRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDLGPDGVVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQR-ADLLRLFTLISYLDDGDTQAGETTNPSMLALQQVVRDHIRSEGLRVVRDLQ------AAGGGMDVA-----DEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFKES----KLDDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEWQER 1968
            SL  P P+DF+ TW  L+  L  IL D+G G  +D WM LY+ VY LC+ P  P+H +LY++L+++L  F       L             L +Y   FE Y+ GM+Y + +F+YLDR+WI  NH + G +P + VY V E+AL +W++ V+ V+ +R+R S++  ++ +R R  L  G   V+R ++ TY  LGFE R+RS+LF+ ELE+ +V D  A++   G  +LQY+ V  YL E E+ + EE  RC + +   + RR+  A + AL+    +R+++EA+ ML+A    R ADL R++ L+           + +   +  LQ VVR+HI++EGL+VV+         AAGGG+  A      + + TP                               G GG V+S+ VV A L VY  +  LV E+F ++  F  VLD+A + FVNA+  APE LAR+AH  LD+G        ++ +  R+AAL R  FLF ++ DKD+FH+ Y++LL++R+ + TSVSDEAEE ML  ++  +GFEF S LQRMF+DK++S  L+  Y  W  R
Sbjct:    2 SLFQPVPMDFESTWQMLEDHLNPILRDIGDGLNSDSWMDLYTAVYKLCSNPTFPKHRELYFRLRDMLINFTCGFCDELQQLLQSSPPSEVFLNKYCTGFERYSIGMKYSADIFSYLDRYWIRENHFDIGENPTEHVYYVWELALHMWREHVYDVINMRVRQSVMDLLENSRRRRQLAPGIADVLRRLMQTYVLLGFENRERSELFRKELEEAMVADAEAHYKGVGADLLQYLGVGAYLAEAEKLIQEEEVRCRACLNRESVRRVRRAVEAALVVHPLDRILEEAKGMLAAEGGPRTADLRRMYALMR----------DVSEDGIARLQDVVREHIQAEGLKVVKAFNPPTGAVAAGGGVRPAWGAGPGDAAATP-------------------------------GPGGGVSSEQVVAAALGVYWQHHALVKEAFLEAKEFLDVLDQASRVFVNAIDGAPEMLARHAHRFLDKGSGGGGGAPRVAEDERQAALGRAAFLFQFVGDKDVFHKVYARLLAQRLAEGTSVSDEAEELMLGKLKEYAGFEFISGLQRMFIDKSMSEDLNGEYRRWLAR 534          
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: W2PVV8_PHYPN (CULLIN_2 domain-containing protein n=34 Tax=Phytophthora TaxID=4783 RepID=W2PVV8_PHYPN)

HSP 1 Score: 280 bits (717), Expect = 3.420e-80
Identity = 175/573 (30.54%), Postives = 285/573 (49.74%), Query Frame = 1
Query:  295 SLLTPDPIDFDVTWAQLKAALTAILTDLGTGFPNDLWMKLYSNVYYLCTKPLDPQHAKLYWKLKELLEEFVDSVKRRLMAYDAGRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDLGPDGVVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAGETTNPSMLALQQVVRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFKES----------------KLDDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEWQE 1965
            SLL    ++F+  W +++  L +++T       N+ W+K+YS +Y +CT P  PQ   L+++L+ LL + V+++ + L A D       E L+ Y  +FE +  G  Y S+LF YL+R+WI+ +HCETG++P  GVY V E++L +W D  FS LK RL  +II    AAR +          + S + TY +LG  ++D+  L++ ELE   +ED   ++S +   +L  + +  YL+E E    +E  RC S +   T  ++  A    L+  HA+R+ ++A   L     Q+ DL R+F+L S L      A E    ++++ + +++ +I   G+ VV+  Q         +E +  P  +                                       ++A+++V   Y  L+ ++F      R  LD+AC+AF N+ PR PE LA+Y H L+ R  K+                  L D   E  ++ +  +F  I DKDIF +YYSK L+KR+I+ TS SD+ E  ++  +R + G +F SKLQ+M  DK LS  L   +  W E
Sbjct:   52 SLLKASTVNFENEWREMQPPLASLVTGTPQTLTNEKWLKMYSGIYKICTNPGAPQAEMLFFRLRGLLVKHVEAILKELNAIDG----EPEFLSHYCTSFEAFTTGTSYISELFRYLNRYWISYSHCETGQAPVPGVYPVTELSLHIWHDIAFSKLKKRLVKAIIHIFHAARRKRSECFEDGDCIASTVQTYFSLGLCRQDQMSLYREELEQPFLEDAARFYSAKAIALLSRVTISEYLREAELLCAQEQKRCESRLHRTTVIQVRQACCRVLVDEHADRICEDAENFLINN--QKEDLHRMFSLFSEL------ANEN---ALISFKNILKKYIERSGMEVVQKFQQ--------EETTKNPEGY---------------------------------------IEALVQVRNKYFELIKDAFGFHPLMRTALDQACRAFANSHPRLPELLAKYTHYLMSRDKKQGCSRALLLPGSPRSVLPPLLDDLLEQKIENISVVFCLIDDKDIFKKYYSKFLAKRLIKGTSASDDMEILLIQKLRDICGCDFVSKLQKMMKDKMLSKELMDSFTAWLE 562          
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: A0A3M6V6L0_9STRA (CULLIN_2 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6L0_9STRA)

HSP 1 Score: 280 bits (716), Expect = 6.070e-80
Identity = 177/574 (30.84%), Postives = 287/574 (50.00%), Query Frame = 1
Query:  289 TKSLLTPDPIDFDVTWAQLKAALTAILTDLGTGFPNDLWMKLYSNVYYLCTKPLDPQHAKLYWKLKELLEEFVDSVKRRLMAYDAGRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDLGPDG-VVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAGETTNPSMLALQQVVRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFKESK--------------LDDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEWQE 1965
            T SLL    ++F+  W +++  L +++T       N+ W+++YS +Y +CT P  PQ   L+++L+ +  E V+S+  +L A D         L  Y  +FE++A G  Y S+LF YL+R+WI+ +HCETG +P  GVY V E++L +W D  FS LK RL  +II    +AR R+  +   DG  +   + TY ++G  ++D+  L++ ELE   +EDT  Y+S +   +L  + +  YLQE+E     E  RC + +   T  ++  A    L+  HA+++ ++A   L     Q+ DL RLF+L S L         T   ++++L+ +++ +I   GL VV+  Q         +E +  P  +                                       ++A+++V   Y  L+ ++F      R  LD+AC+ F N+ PR PE LA+Y H L+    K                 + D   E  ++ V  +F  I DKDIF +YYSK L+KR+I+ TS S++ E  ++  +R + G +F SKLQ+M  DK LS  L T   +WQE
Sbjct:   37 TMSLLKTSVVNFEHEWKEMEPPLASLMTGTPQTLTNEKWLQMYSGIYKICTNPGAPQAELLFFRLRGMFIEHVESILNKLNAIDG----EAAFLYHYCSSFESFATGTNYISELFRYLNRYWISYSHCETGHAPVPGVYPVTELSLHIWHDIAFSKLKKRLVKAIIHIFHSAR-RSKSECFEDGDCIARTVQTYFSIGLCRQDQMSLYREELEQPFLEDTARYYSAKAMELLSRVTISEYLQEIELLCAHEQKRCEARLHRTTVVQLRQACCHVLVDEHADQICEDAETFLINN--QKKDLQRLFSLFSEL---------TNENALMSLKNILKKYIERRGLEVVQKFQQ--------EEATKNPEGY---------------------------------------IEALVQVRNKYFNLIKDAFNFHPLMRTALDQACRTFANSHPRLPELLAKYTHYLMSHDKKHGASRALPSPGSPRPTLIMDDMLEQKIENVSVVFCLIDDKDIFKKYYSKFLAKRLIKGTSASNDMEILLILKLRDICGCDFVSKLQKMLKDKMLSKVLLTILEQWQE 547          
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: A0A225WZJ1_9STRA (Cullin family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZJ1_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.260e-77
Identity = 176/564 (31.21%), Postives = 284/564 (50.35%), Query Frame = 1
Query:  316 IDFDVTWAQLKAALTAILTDLGTGFPNDLWMKLYSNVYYLCTKPLDPQHAKLYWKLKELLEEFVDSVKRRLMAYDAGRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDLGPDG-VVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAGETTNPSMLALQQVVRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDR------------GFKESKL-DDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEWQE 1965
            ++F+  W +++  L +++T       N+ W+K+YS +Y +CT P  PQ   L+++L+ LL + V+++ + L           E L  Y  +FE +A G  Y S+LF YL+R+WI+ +HCETG++P  GVY V E+AL +W D  FS LK RL  +II    AAR R+  +   DG  V S + TY +LG  ++D+  L++ ELE   +ED   Y+S +   +L  + +  YL+E E    +E  RC + +   T  ++       L+  HA+++ ++A   L     Q+ DL RLF+L S L      A E    ++++ + +++ +I   G+ VV+  Q         +E +  P  +                                       ++A+++V   Y  L+ ++F      R  LD+AC+AF N+ PR PE LA+Y H L+ R            G   S L DD   E  ++ +  +F  I DKDIF +YYSK L+KR+I+ TS S++ E  ++  +R + G +F SKLQ+M  DK LS  L   +  W E
Sbjct:    4 VNFESEWREMQPPLASLVTGTPQTLTNEKWLKMYSGIYKICTNPGAPQAEMLFFRLRGLLVKHVEAILKELHEIHG----EPEFLTHYCASFEAFATGTSYISELFRYLNRYWISYSHCETGQAPVPGVYPVTELALHIWHDIAFSKLKKRLVKAIIHIFHAAR-RDRSECFEDGDCVGSTIQTYFSLGLCRQDQMSLYREELEQPFLEDAAKYYSAKAVELLSRVTISEYLREAELLCDQEQKRCEARLHRTTVIQVRQTCCRVLVDEHADQICEDAENFLINN--QKEDLHRLFSLFSEL------ANEN---ALMSFKNILKKYIERSGMEVVQKFQQ--------EETTKNPEGY---------------------------------------IEALVQVRNKYFELIKDAFSFHPLMRTALDQACRAFANSHPRLPELLAKYTHYLMSRDKKHGSNRLQLPGSPRSLLPDDETLEEKIESISVVFCLIDDKDIFKKYYSKFLAKRLIKGTSASNDMEILLIQKLRDICGCDFVSKLQKMLKDKMLSKELVESFSAWLE 504          
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: A0A0P1AM02_PLAHL (Cullin family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM02_PLAHL)

HSP 1 Score: 271 bits (693), Expect = 3.650e-77
Identity = 174/573 (30.37%), Postives = 284/573 (49.56%), Query Frame = 1
Query:  295 SLLTPDPIDFDVTWAQLKAALTAILTDLGTGFPNDLWMKLYSNVYYLCTKPLDPQHAKLYWKLKELLEEFVDSVKRRLMAYDAGRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAAR--ERNMLDLGPDGVVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAGETTNPSMLALQQVVRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFK----------------ESKLDDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEW 1959
            SLL    ++F+  W  ++  L +++T       ND W+K+YS +Y +CT P  PQ   L+++L+ LL + V+ + R+L   D       E LA Y  +FE +  G  Y S+LF YL+R+WI+ +HC+TG++P  GVY V E++L +W D  F  L+ RL ++I+    +AR  + +  + G    + S + TY +LG  K+D+  L++ ELE   +E+   +++ +   +L  M +  YLQE E   T+E +RC   +   T  ++  A    LI  HA+R+ ++A   L     Q+ DL R+F L S L          T  ++++L+ +++ +I   G  VV+  Q         DE +  P  +                                       ++A++++   Y  L+ ++F      R  LD+AC+AF N+ PR PE LA+Y H L+ R  K                 + L D   E  ++ +  +F  I DKDIF +YYSK L+KR+I+ TS S+E E  ++  +R + G +F SKLQ+M  DK LS  L   +  W
Sbjct:    2 SLLKTSAVNFENEWRDMQLPLASLITGAPQTLTNDKWLKMYSAIYKICTNPGAPQAEMLFFRLRGLLVKHVEKLLRKLDTIDGD----PEFLALYCTSFEAFTTGTSYISELFRYLNRYWISYSHCKTGQAPVPGVYPVTELSLHIWHDVAFVKLRKRLITAILHIYHSARLDKSDCFEYGD--CIASTVQTYYSLGLCKQDQLSLYREELELPFLENVAEFYTAKALELLSRMTISEYLQETELLCTQEQNRCDLRLHRTTVIQVRQACCRVLIDEHADRICEDAETFLINN--QKNDLHRMFALFSEL---------VTERALISLKNILKKYIERSGREVVQTFQQ--------DETTKNPEGY---------------------------------------IEALVQIRNKYFELIKDAFGYHPLMRTALDQACRAFANSHPRLPELLAKYTHYLMSRDKKYGCSRALILPGSTRSVSTPLSDDMLEQRIENISVVFCLIDDKDIFKKYYSKFLAKRLIKGTSASNEMEILLIQKLRDICGCDFVSKLQKMMKDKMLSKELVNSFTGW 510          
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: F0WHK3_9STRA (Cullin family protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHK3_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.860e-63
Identity = 152/569 (26.71%), Postives = 272/569 (47.80%), Query Frame = 1
Query:  295 SLLTPDPIDFDVTWAQLKAALTAILTDLGTGFPNDLWMKLYSNVYYLCTKPLDPQHAKLYWKLKELLEEFVDSVKRRLMAYDAGRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDL-GPDGVVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAGETTNPSMLALQQVVRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFKESK-------------LDDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEW 1959
            SLL P  +D +  W  ++ +L ++++ +     ++ W+++Y+ +Y +CTKP  PQ   LY++L+ LL   ++       A  +  S   E L  Y   F  +  G  Y S+LF YL+R WI  +H ETG++P  GVY ++E+A+ +W D VF+ +  ++  S+ +    AR+   + + G D + R++ + Y +LG  ++D   +++ ELE   + D   Y++     +L  + V  YL+ VE    +E  RC   +   T  +        L+  HAER+ D     L  R  QR DL R+F L   L +  T         +++ + +++ +I   GL VV+  +  G   +                                                ++ ++A+++V   Y  L+ ++F   +  R  LD+AC+AF N+  + PE LA+YAH L+    K+ K               + + E  ++ +  +F+ + DKDIF ++Y+K L+KR+I+ TS +++ E  ++  +R   G +F SKLQ+M  DK LS  L+  +  W
Sbjct:    2 SLLKPSAVDIESLWKNIEPSLQSLVSAVPQTLTHERWVEMYTGIYKVCTKPGAPQGELLYFRLRGLLVSHLELC----FADISSISGEIEFLEHYCTQFNAFVTGTSYTSELFRYLNRFWIKYSHSETGQAPIPGVYAIDELAIHLWSDIVFTRVNSKVLYSVTQLFRYARDSKSISVDGADYITRAVESLY-SLGSCQQDPLSVYRDELETPFLLDLSTYYAAMAGELLSKLAVAEYLKVVEIICRQEQQRCEGSLHPTTMLQARKICCRVLVEHHAERICDHVETFL--RHNQREDLRRIFLLFLELSNDQT---------LISFKNILKSYIERSGLDVVQRFEHEGTVKN-----------------------------------------------PEEYIEALVQVRNGYCKLIHDAFNSHSLMRTALDQACRAFANSHVKLPELLAKYAHHLMTAEKKKKKSSAFAQLKIIDKPYQEDSMERKIENISVVFSLLNDKDIFKKFYAKYLAKRLIRETSTANDMEILLIQKLRETCGGDFVSKLQKMLKDKILSRELNNDFSSW 507          
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: A0A1V9YJY8_9STRA (Cullin family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJY8_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.290e-60
Identity = 149/474 (31.43%), Postives = 229/474 (48.31%), Query Frame = 1
Query:  541 AGRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDLGPDGVVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAGETTNPSMLALQQVVRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFKESKLDDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEWQ 1962
            A      E LA Y   F  Y+ G  Y S+LFAYL+R+WI   H E G++P  GVY V E+AL +W+D V S L+ R+ ++++    AAR           +V + +  Y  LG  K+D  +L++ E+E   ++DT  Y++     +L  + +  YL+ VE    +E  RC   +   T ++        L+  HA+R+ D   A L A   +  DL RLFTL S L             +++  +  ++  I   GL VVR  Q          ED+L  P                                       + +DA++ V E Y  L+ E+F   A  R  LD+AC+AF NA PR PE LA+Y H L+ +      L+D   EA +D +G +F  + DKD+F ++Y+KLLS+R+I  +S++ + E  ++  +R + G +F SKLQ+MF DK LS      Y +W+
Sbjct:   80 AAEPGDAEFLALYCSHFNVYSTGSNYVSELFAYLNRYWIRYAHSEYGQAPIPGVYPVPELALRIWRDIVHSTLQQRVVNALLHIFRAARVAGDAYFEHGDLVATTVQIYLVLGLNKQDPLKLYRQEVETVFLQDTAVYYAGLAQTLLTQVSIAEYLEIVETLCKQEERRCEGKMHRITVKQARQTCCRVLVEDHADRICDHVDAFLEAH--RTRDLHRLFTLFSELPH---------EHALMMFKGNLKKFIEKSGLAVVRQFQT---------EDTLRNP--------------------------------------QEYIDALVAVREKYVELIREAFGFHALMRTALDQACRAFANAHPRLPELLAKYTHLLMTK----PGLNDNEVEAKIDHIGVVFCLLDDKDVFKKFYAKLLSQRLIHGSSMAQDFELLLVQKLRDICGCDFVSKLQKMFADKLLSQTTTATYRQWR 491          
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Match: A0A1V9ZWZ8_9STRA (Cullin family protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWZ8_9STRA)

HSP 1 Score: 225 bits (573), Expect = 2.030e-60
Identity = 142/474 (29.96%), Postives = 239/474 (50.42%), Query Frame = 1
Query:  544 GRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETGRSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDLGPDGVVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHILQYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAERLVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAGETTNPSMLALQQVVRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAXXXXXXXXXXXXXXXXXXPXXSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGFRLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFKESKLDDGAREAALDRVGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGFEFTSKLQRMFVDKALSTHLHTGYVEWQE 1965
            G S   E L  Y + F  Y+ G  Y S+LFAYL+R+WI   H E G++P  GVY V E+AL +W+D V + ++ R+ ++++     +RE          +V + +  Y  LG  K+D  +L+++E+E   ++DT +Y+S    ++LQ + +  YL  VE+  T+E  RC   +   T +++       L+  H E++ DE  + L     Q  DL RLF L S L +         + ++++L+  ++ +I   G+ VV+  Q          ++SL  P                                       + ++A++ V E +  L+ E+F   A  R  LD+AC+ F N+ PR PE LA+  H L+ +       +D   E  +D++G +F  + DKDIF +YY+KLLS+R+I  TSV+++ E  ++  +R V G +F SKLQ+MF DK +S  + + Y  W++
Sbjct:   81 GESGDAEFLELYCNHFNIYSTGSNYVSELFAYLNRYWIRYAHSEYGQAPIPGVYPVPELALRIWRDIVHTTMQHRVVNALLHIFHTSRESGSEFFEYGDLVTTTVQIYLVLGLNKQDPLKLYRNEVETIFLQDTASYYSLVAQNLLQNVSIAEYLNLVEKLCTQEEHRCEGKMHRITVKQVRQTCCRVLVEEHTEQICDEMNSFLENN--QVDDLRRLFHLFSELPN---------DQALMSLKANLKKYIEKSGMEVVQKFQ---------HDESLKNP--------------------------------------QEYIEALVAVREKFVDLIREAFGFHALMRTALDQACRTFANSHPRLPELLAKCTHLLMTK----QGPNDNEIEVKIDQIGVVFCLLDDKDIFKKYYAKLLSQRLIHGTSVANDFEVLLVQKLREVCGCDFVSKLQKMFSDKLVSQTISSSYRAWRD 492          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1707.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUY8_ECTSI2.660e-24966.13Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ecto... [more]
A0A835YSZ1_9STRA8.950e-21161.40Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A6V1QSV4_HETAK5.690e-11637.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W2PVV8_PHYPN3.420e-8030.54CULLIN_2 domain-containing protein n=34 Tax=Phytop... [more]
A0A3M6V6L0_9STRA6.070e-8030.84CULLIN_2 domain-containing protein n=1 Tax=Peronos... [more]
A0A225WZJ1_9STRA2.260e-7731.21Cullin family protein n=1 Tax=Phytophthora megakar... [more]
A0A0P1AM02_PLAHL3.650e-7730.37Cullin family n=1 Tax=Plasmopara halstedii TaxID=4... [more]
F0WHK3_9STRA1.860e-6326.71Cullin family protein putative n=1 Tax=Albugo laib... [more]
A0A1V9YJY8_9STRA1.290e-6031.43Cullin family protein n=1 Tax=Achlya hypogyna TaxI... [more]
A0A1V9ZWZ8_9STRA2.030e-6029.96Cullin family protein n=1 Tax=Thraustotheca clavat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1707contigP-wetherbeei_contig1707:1053..6585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FUY8
Preferred nameCUL1
PFAMsCullin,Cullin_Nedd8
Model size1968
Max annot lvl2759|Eukaryota
KEGG koko:K03347
KEGG Pathwayko04110,ko04111,ko04114,ko04120,ko04141,ko04310,ko04340,ko04341,ko04350,ko04710,ko05168,ko05200,map04110,map04111,map04114,map04120,map04141,map04310,map04340,map04341,map04350,map04710,map05168,map05200
KEGG ModuleM00379,M00380,M00381,M00382,M00387,M00407,M00411
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000082,GO:0000086,GO:0000151,GO:0000152,GO:0000165,GO:0000209,GO:0000278,GO:0002119,GO:0002164,GO:0002252,GO:0002376,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006275,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006513,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006915,GO:0006935,GO:0006950,GO:0006952,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007346,GO:0007399,GO:0007568,GO:0008150,GO:0008152,GO:0008156,GO:0008219,GO:0008283,GO:0008285,GO:0008340,GO:0008361,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010259,GO:0010265,GO:0010389,GO:0010498,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0010720,GO:0010824,GO:0010826,GO:0010941,GO:0010942,GO:0010948,GO:0010972,GO:0012501,GO:0014041,GO:0014042,GO:0014066,GO:0014067,GO:0016043,GO:0016055,GO:0016310,GO:0016567,GO:0016740,GO:0019005,GO:0019219,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0022008,GO:0022402,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023057,GO:0030003,GO:0030111,GO:0030154,GO:0030162,GO:0030163,GO:0030174,GO:0030178,GO:0030587,GO:0030674,GO:0031098,GO:0031146,GO:0031156,GO:0031285,GO:0031286,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031461,GO:0031625,GO:0031647,GO:0031667,GO:0031974,GO:0031981,GO:0032006,GO:0032007,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032268,GO:0032270,GO:0032297,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032535,GO:0032886,GO:0032991,GO:0033043,GO:0033262,GO:0033554,GO:0034097,GO:0035556,GO:0036211,GO:0038061,GO:0040011,GO:0042127,GO:0042176,GO:0042221,GO:0042330,GO:0042592,GO:0042594,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043161,GO:0043170,GO:0043207,GO:0043224,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043516,GO:0043518,GO:0043565,GO:0043632,GO:0043687,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0044843,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045786,GO:0045862,GO:0045930,GO:0045934,GO:0046605,GO:0046606,GO:0046626,GO:0046627,GO:0046916,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048878,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051052,GO:0051053,GO:0051093,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051403,GO:0051493,GO:0051494,GO:0051603,GO:0051607,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051960,GO:0051962,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0060090,GO:0060255,GO:0060284,GO:0060548,GO:0060828,GO:0061136,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070498,GO:0070507,GO:0070555,GO:0070647,GO:0070887,GO:0071310,GO:0071345,GO:0071347,GO:0071704,GO:0071840,GO:0075260,GO:0075262,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090090,GO:0090329,GO:0090702,GO:0097159,GO:0097190,GO:0097193,GO:0098542,GO:0098771,GO:0099120,GO:0140096,GO:0198738,GO:1900076,GO:1900077,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901796,GO:1901797,GO:1901800,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902494,GO:1902531,GO:1902532,GO:1902576,GO:1902749,GO:1902750,GO:1903047,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903429,GO:1903431,GO:1903463,GO:1903464,GO:1903466,GO:1903467,GO:1904799,GO:1904801,GO:1905114,GO:1990234,GO:1990452,GO:1990837,GO:2000026,GO:2000058,GO:2000060,GO:2000104,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2001020,GO:2001021
Exons9
Evalue2.48e-251
EggNOG OGsCOG5647@1|root,KOG2166@2759|Eukaryota
Ec32 ortholog descriptionCullin repeat-like-containing domain
Ec32 orthologEc-01_008690.1
Descriptionubiquitin protein ligase binding
Cds size1737
COG categoryO
BRITEko00000,ko00001,ko00002,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1707.1.1prot_P-wetherbeei_contig1707.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1707 1284..6585 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186106.7031727-UTR-P-wetherbeei_contig1707:1052..12831683186106.7031727-UTR-P-wetherbeei_contig1707:1052..1283Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1707 1053..1283 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186106.7164872-CDS-P-wetherbeei_contig1707:1283..15381683186106.7164872-CDS-P-wetherbeei_contig1707:1283..1538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1707 1284..1538 +
1683186106.726747-CDS-P-wetherbeei_contig1707:1966..21791683186106.726747-CDS-P-wetherbeei_contig1707:1966..2179Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1707 1967..2179 +
1683186106.73409-CDS-P-wetherbeei_contig1707:2822..29121683186106.73409-CDS-P-wetherbeei_contig1707:2822..2912Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1707 2823..2912 +
1683186106.741623-CDS-P-wetherbeei_contig1707:3134..33041683186106.741623-CDS-P-wetherbeei_contig1707:3134..3304Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1707 3135..3304 +
1683186106.7541955-CDS-P-wetherbeei_contig1707:4113..42551683186106.7541955-CDS-P-wetherbeei_contig1707:4113..4255Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1707 4114..4255 +
1683186106.7639518-CDS-P-wetherbeei_contig1707:4761..49381683186106.7639518-CDS-P-wetherbeei_contig1707:4761..4938Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1707 4762..4938 +
1683186106.7735105-CDS-P-wetherbeei_contig1707:5363..56091683186106.7735105-CDS-P-wetherbeei_contig1707:5363..5609Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1707 5364..5609 +
1683186106.785023-CDS-P-wetherbeei_contig1707:5882..61361683186106.785023-CDS-P-wetherbeei_contig1707:5882..6136Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1707 5883..6136 +
1683186106.795275-CDS-P-wetherbeei_contig1707:6395..65851683186106.795275-CDS-P-wetherbeei_contig1707:6395..6585Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1707 6396..6585 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1707.1.1

>prot_P-wetherbeei_contig1707.1.1 ID=prot_P-wetherbeei_contig1707.1.1|Name=mRNA_P-wetherbeei_contig1707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=579bp
MMRSQGGGSGGGVVMAPLSTKSLLTPDPIDFDVTWAQLKAALTAILTDLG
TGFPNDLWMKLYSNVYYLCTKPLDPQHAKLYWKLKELLEEFVDSVKRRLM
AYDAGRSSHTELLARYRDAFENYAEGMRYGSKLFAYLDRHWIATNHCETG
RSPRDGVYEVNEMALIVWKDRVFSVLKVRLRSSIIKAIDAARERNMLDLG
PDGVVRSMLATYETLGFEKRDRSQLFQHELEDFIVEDTRAYFSRRGCHIL
QYMPVPRYLQEVERYLTEEASRCASFVGSYTARRILVAAQEALIAAHAER
LVDEARAMLSARPEQRADLLRLFTLISYLDDGDTQAGETTNPSMLALQQV
VRDHIRSEGLRVVRDLQAAGGGMDVADEDSLTPPAHPLPPLAAAAADVLA
AGGGGGGGGGPGGSGVGGRVTSDDVVDAMLKVYEHYKCLVAESFPDSAGF
RLVLDEACKAFVNAVPRAPEWLARYAHCLLDRGFKESKLDDGAREAALDR
VGFLFTYIADKDIFHRYYSKLLSKRIIQLTSVSDEAEERMLANMRRVSGF
EFTSKLQRMFVDKALSTHLHTGYVEWQER
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mRNA from alignment at P-wetherbeei_contig1707:1053..6585+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1707.1.1 ID=mRNA_P-wetherbeei_contig1707.1.1|Name=mRNA_P-wetherbeei_contig1707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5533bp|location=Sequence derived from alignment at P-wetherbeei_contig1707:1053..6585+ (Phaeothamnion wetherbeei SAG_119_79)
TTTGTGTGAAGAGCCTTTAATTTCCTCCAGGCCTCCAAGAAAAAAAGGAA TCGGGTCTCTCCGGAGCAACTCTGCAATCCTATCAGCTGCACCAAGGAGA AATCGGCGGTTGCGGAGCTCAGCCCTGAACGGGAGAGCGTTTGAAGCAGA AATTCTCCAATTTCGACTCACGGCGAGGCGGCTGGGCGGCGGAGCTCGCG CAGGGTTGCTGCGAGCGACGGCGACGACGCCATGATGCGCTCCCAAGGAG GTGGGAGCGGAGGCGGCGTCGTCATGGCTCCCCTGTCAACAAAGTCACTC TTGACGCCCGACCCAATCGACTTCGACGTTACCTGGGCGCAGTTGAAGGC TGCGCTGACGGCGATTCTGACTGATCTTGGCACCGGTTTCCCCAACGACC TGTGGATGAAGCTCTACTCGAACGTGTACTACCTCTGCACAAAGCCTCTG GACCCGCAACATGCCAAGCTCTACTGGAAGCTCAAGGTCGGTTGGCGCTT CTTTTCTCTTTCCACCAATCGTATTATTCGCAACCGCGCCCTTGCCCTTT GCGCGAGCATTCGGACGCGACGCAAGGTTATTTCGTCCTCGATATGGCTC AAGACGACTTTTTCGGTCTCAAAGGAAAGGAGGAAAACTTATTATCGGCG TCTTTGCTTTTTTAAGCACCACTTTCGGGCCCCTCCTGTTGCATCTTCCG CCCCTCCCCTATCCGCTTTCCCATAACTCGCCGAAAACCCCGACCATCGT GCAATGAACACATCCTGCCTGACGGCCGCCGGAAACCTGGAAAATCAGAA AAAAAGGCACAAAAACCGCCGCGCAAGAACATATTCGGCGGCTAACCGGT AAACTGACAAAAACTTAACAGTACCAAACTGACACCGAAACCCAAATATC CCTACCGCTTGCAGGAGCTGCTAGAGGAATTTGTGGACTCGGTGAAGCGG CGGCTGATGGCGTACGACGCCGGCCGCAGCAGCCACACCGAGCTGCTGGC GCGCTACCGCGACGCCTTCGAGAACTACGCCGAGGGCATGCGGTACGGTT CAAAGCTATTCGCGTACCTCGATCGCCACTGGATCGCCACCAACCACTGC GAGACGGGCCGCTCGCCGCGCGACGGGGTGAGCGTGACCTACCTGCCTGC CTACCCTTTTTTGTGCTACCATGTTTTTGTGCGAAGTATTTTGTGCATCC ATGAATGAAGCGACAACCATTTTCTGGTCGTTTTGAGTCGCTTTTTCGGT TCTTTTGGGGGTCTTTTTTACGTTATTAACTTAGTTGACCTGAGACGAGA AAGTGCGCAGACCGTTCGATAACGTTCTTTTCGCAGCGCTTAGCTTCGAT TGGGTACCTTTTCGCTGTTCCGTATCGATTTGGGTCATCCGCTGTTCATC ATGATGTGGAGGCTTCGGTTTCTGCTGGCCGACGCTGGGATTTTTTGCCG AGGGCTGGTCTGCTACAGGCGCCGCTTTTCAAAGCGCGAAGGCACGAACG AGGCGAGCGACGATGCGCAGTGCACTGCAGATAGTCTTTTGGGGGTGGAG AATCGGCAGCCAAGCGGAAACGATCCGCCGCCGCGCCGCATGAAACTCCC TTTTGTGGGGCCACCCGCCGCTCGCCAGTGGCCGCTGTTGGACCTTTCCT GCTCCACCCCCTGATCGCTGCTGAGTTGCAACTCTGTTAATTTGTCTCAA CGGTCGCGCCACGCCTCGCCTCCCGTCCTCTTTCTTTTCTTCTTCAATTT CGGCTGCCGTCTGCTCGCAGGTGTATGAGGTGAACGAGATGGCGCTGATC GTGTGGAAGGATCGCGTCTTCTCCGTGCTCAAAGTACGCCTCCGATCCAG CATCATCAAGGTGAGGAAAACAGAACGAGGAAAACCGAAAAAAGGAAGGG TGATGGGGGGGGGCGCCGCCGTGCGGCCGTTTATTGAGCTGGCGAGAGAG TTAGCCGGTTGCGCTCGTCCTGCAGCAGCTCCGCAGGCTGCTACTGTTCG GCCGCCCGCCCCGCCTGGGAAACAAAGGGCAAATCAAACCAAAATTAAAC TTAAGCGACAACGAAAACCGGAAACCGAGCAGGCGATCGACGCGGCGCGA GAGCGCAACATGCTGGACCTGGGGCCAGACGGCGTGGTCCGGTCGATGCT AGCGACGTACGAGACGCTCGGCTTCGAAAAGCGTGACCGCTCGCAGCTCT TCCAGCACGAACTCGAGGACTTCATCGTCGAGGATACGCGCGCCTACTTC AGGTACGTACATGCAGGCTTGTTCTGGTCTGCCCTGTACTCTCACTGTTC CGTGTGTAATGTCGGAAAGGGGAGACATGCTGCCTGCGTAGGAGGAAACG GGGCGGTGGTGGCGGTGGCGATGGCAGTGGCAGCGGCGGCAGTGGTATTG GCGACGGCGGCAGCGGCTGTCATGGTGGAGGCGGTGGCGGCGGTAGTGAT ATCACCTAAGGGTGGCGACTGCTGACGTTCGCCTTGGCTGCGGACGGCAA TACCCTGCCTGCACCTTCCATACCGGAAGACTTATGGGAAGCAATAAGGA AAGAAGCGGTTTCCTAAGCGATCGCCGCCCATTCTGTTGGCTTTTCCAGC CAGCATCCCGTGCAGCATCCCGCAGTCTGATGATATGAGAACTCTCCTCG TCTTTCCTGCTTCTGCTTCTTCCTCTTGCGTCCCCCCTTCCTGCTTTCTG GTTCGGCCCGGGCGCTTTCCGGCCCGGATGCCTTCCCGGCGAACCGGACA TGCGGCTGCAAACGGCATCGCGCGACGATGGCGATCAAACGGCGATGGCA CGCCCGGCGAACGGCGTATCTGGTGACGGCCGTCTCGTATGGCAAACGCG CCTCTTGTGACGACTGCGCATCCGGGGGACCAACGGGCGGGCGGGTGACC CTCTCTGTGTCTTTCGCTCATCTGTCCGGTCGATTTGATTCCCTGGCTTG CGACGCTCTCCCTCCTTTCTTCCCCTCCCCTTTGCGCGATCCTCTTCAAT TGCATCAACTCTCCCTCATTTTCGTCGGCCCCCCTTTCTCTGTTGTTTTC TTTGAGAACAGCCGGCGGGGGTGCCACATCCTCCAGTACATGCCCGTGCC GCGGTACCTGCAGGAGGTGGAGCGCTACCTGACGGAGGAGGCGTCGCGCT GCGCGTCCTTCGTCGGTAGCTACACCGCACGCCGCATCCTCGTCGCAGCA CAGGTGCGAATGGCAGAAGGAAAGAAGTAGGGGTGAATGAGATGAGGGGC ACAAAGCGGCATGAGACAGACGGAAAGGAGGCAGAGGAGAATGAGAAGAA GTGGGTCGGACGAGTAGGTGGACTGATATCGTCAATTGCTTGTTGTGTGC CCCCTCTCGCCCCCAACTGGCCCTATCTTTAGGGTTAGTGGGGATTTGAG AGGGTTCGGCGTTGCCTCTCTTCCTTTCTTTGCATGGGAATCACCCCGTG TTATAGGCTCTGTCCGTCCGGTCAAGGCTGTCATGTTGTCGGAGCCGGTT CTCACCTCGCCTCCTCTCTTTCTCTCTTCCCCTTCTCGTCCCGCCGCGCT TCGCCCCACGCCCCCTGCCGATGGCGGGCTTGCCGCGCGTGCGCATCCGG AACGGGCGGACGCACCTGACGGACCTGTTAACCGACCGAACGGATGGAAC GGTATCGATGGAACTCTACCGACCGGACGGATGGACCGGATTGGATCGAA CGCCGGCAGGAGGCACTGATCGCAGCGCACGCGGAGCGGCTGGTGGACGA GGCTCGCGCGATGTTGTCGGCGCGGCCGGAGCAGCGTGCCGACCTGCTGC GTCTCTTCACGCTCATCAGTTACCTCGACGACGGCGATACCCAGGCGGGC GAGACCACCAACCCCTCCATGCTCGCGCTGCAGCAGGCGAGTGATTTCGA CAGAGGCGCCGGACCGGCCGGGGAGGGGAGGGAGGAAGGACAGGAGCCGG GCAAGGGAGGGAGTCGATCGAGAGAGGGTGGTGGGGGCGTGAGTGAGCGG TGAGGCGAGGCGAGGCGGGCCCGAAGGAGGGGAGAGGAGGAGGGTGGGGA GGGACGGCGATGGGGCCGGGGATGTGGGGGAACAAGGGGGTGCAGAACAA CGGGTGCTCATTGTGGTGCTGGCACGTCTTCTCTCTCTCTCTCCTGTGCA CGTCCGCGAAAATCAGCGAGCGAGCGCCAAAAGCATGACCGCCGCCTCCT TTCTGTCTTTTGACTGTATCTCCTGTCTGCCTGCCTTCTACAATGCCGTC TGACCCTGTTTGACACGACGCGAAACGGCTGCGAAACGAAACCGGAAATT CTTCAACGCAGGTGGTACGGGATCACATCCGCAGCGAGGGGCTGCGGGTG GTGCGCGACCTGCAGGCGGCGGGCGGCGGGATGGACGTTGCTGACGAGGA TTCGTTGACGCCGCCGGCGCACCCGCTGCCGCCGCTGGCCGCTGCCGCCG CAGATGTCCTGGCGGCGGGGGGCGGCGGCGGCGGCGGCGGCGGGCCGGGC GGGAGCGGCGTCGGTGGGCGGGTCACCAGCGACGATGTCGTCGACGCTAT GCTCAAGGTGGGTTTTCTTTTATGGTTTCAGTTTTCTTTCTTTTTTTTGC TTCGGATGCCACGGCTCCTCTCTTCTTGTCCGCCTCAGCTGGCTGTTGTG GTTTTCTGCGTTGGGCTGCTGCGTGGGCTGGTAAAGCGGTTTCTGCGTCT TCCTTCTGATTGTTTCAGTTTAAGGCCTATCCTGTTTCCATCGCCTTCCT GTCCCGTTTACCGTTTCTAGCCAGTTTCGCTCCGCGCCGGCCCTTTCGCT CCGCGCTGTCGGACTTGAACGGACAAACAGGTGTACGAGCACTATAAGTG CCTGGTCGCCGAGTCCTTCCCGGACTCGGCGGGCTTCCGGCTTGTCCTGG ACGAGGCCTGCAAAGCCTTTGTCAACGCCGTGCCGCGCGCGCCCGAGTGG CTGGCGCGCTACGCGCATTGCCTGCTCGACCGCGGCTTCAAGGAATCCAA GCTCGACGATGGCGCGCGGGAGGCGGCGCTGGACCGGGTCGGCTTTCTGT TCACGTACATTGCCGACAAAGACATCTTCCACAGGTCGGTTTCATTTTTT CCCCTGTAGCGGTGTTTTTCTGTCCATGGTTTCTGAAACGGTTCGTTTTT CCCCCCTAGCATACTCGGCAACGTCAGTTTTTTGTGAAGGCGGTGTGGAT GGATGCGATTTCTGACATCCCACCTCTCTTTTCTCCTGCGCCCGCCCCTC CGCCTTTCCCGCGTCCATCCCGGGACCCCGGAAAACCACGCCGGTTTCCT CAAACCGGACGCTGCTGCGAAACCGGTTTGAGGAAAGCCGCAGGTATTAC AGCAAGCTGCTGTCGAAGCGCATCATCCAGCTGACGTCCGTCTCGGACGA GGCGGAGGAGCGCATGCTGGCCAACATGCGGCGTGTGTCGGGCTTCGAGT TCACGTCCAAGCTGCAGCGCATGTTCGTCGACAAGGCGCTCTCGACGCAC CTCCACACGGGCTACGTCGAGTGGCAGGAGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1707:1053..6585+

>mRNA_P-wetherbeei_contig1707.1.1 ID=mRNA_P-wetherbeei_contig1707.1.1|Name=mRNA_P-wetherbeei_contig1707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1737bp|location=Sequence derived from alignment at P-wetherbeei_contig1707:1053..6585+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATGCGCTCCCAAGGAGGTGGGAGCGGAGGCGGCGTCGTCATGGCTCC
CCTGTCAACAAAGTCACTCTTGACGCCCGACCCAATCGACTTCGACGTTA
CCTGGGCGCAGTTGAAGGCTGCGCTGACGGCGATTCTGACTGATCTTGGC
ACCGGTTTCCCCAACGACCTGTGGATGAAGCTCTACTCGAACGTGTACTA
CCTCTGCACAAAGCCTCTGGACCCGCAACATGCCAAGCTCTACTGGAAGC
TCAAGGAGCTGCTAGAGGAATTTGTGGACTCGGTGAAGCGGCGGCTGATG
GCGTACGACGCCGGCCGCAGCAGCCACACCGAGCTGCTGGCGCGCTACCG
CGACGCCTTCGAGAACTACGCCGAGGGCATGCGGTACGGTTCAAAGCTAT
TCGCGTACCTCGATCGCCACTGGATCGCCACCAACCACTGCGAGACGGGC
CGCTCGCCGCGCGACGGGGTGTATGAGGTGAACGAGATGGCGCTGATCGT
GTGGAAGGATCGCGTCTTCTCCGTGCTCAAAGTACGCCTCCGATCCAGCA
TCATCAAGGCGATCGACGCGGCGCGAGAGCGCAACATGCTGGACCTGGGG
CCAGACGGCGTGGTCCGGTCGATGCTAGCGACGTACGAGACGCTCGGCTT
CGAAAAGCGTGACCGCTCGCAGCTCTTCCAGCACGAACTCGAGGACTTCA
TCGTCGAGGATACGCGCGCCTACTTCAGCCGGCGGGGGTGCCACATCCTC
CAGTACATGCCCGTGCCGCGGTACCTGCAGGAGGTGGAGCGCTACCTGAC
GGAGGAGGCGTCGCGCTGCGCGTCCTTCGTCGGTAGCTACACCGCACGCC
GCATCCTCGTCGCAGCACAGGAGGCACTGATCGCAGCGCACGCGGAGCGG
CTGGTGGACGAGGCTCGCGCGATGTTGTCGGCGCGGCCGGAGCAGCGTGC
CGACCTGCTGCGTCTCTTCACGCTCATCAGTTACCTCGACGACGGCGATA
CCCAGGCGGGCGAGACCACCAACCCCTCCATGCTCGCGCTGCAGCAGGTG
GTACGGGATCACATCCGCAGCGAGGGGCTGCGGGTGGTGCGCGACCTGCA
GGCGGCGGGCGGCGGGATGGACGTTGCTGACGAGGATTCGTTGACGCCGC
CGGCGCACCCGCTGCCGCCGCTGGCCGCTGCCGCCGCAGATGTCCTGGCG
GCGGGGGGCGGCGGCGGCGGCGGCGGCGGGCCGGGCGGGAGCGGCGTCGG
TGGGCGGGTCACCAGCGACGATGTCGTCGACGCTATGCTCAAGGTGTACG
AGCACTATAAGTGCCTGGTCGCCGAGTCCTTCCCGGACTCGGCGGGCTTC
CGGCTTGTCCTGGACGAGGCCTGCAAAGCCTTTGTCAACGCCGTGCCGCG
CGCGCCCGAGTGGCTGGCGCGCTACGCGCATTGCCTGCTCGACCGCGGCT
TCAAGGAATCCAAGCTCGACGATGGCGCGCGGGAGGCGGCGCTGGACCGG
GTCGGCTTTCTGTTCACGTACATTGCCGACAAAGACATCTTCCACAGGTA
TTACAGCAAGCTGCTGTCGAAGCGCATCATCCAGCTGACGTCCGTCTCGG
ACGAGGCGGAGGAGCGCATGCTGGCCAACATGCGGCGTGTGTCGGGCTTC
GAGTTCACGTCCAAGCTGCAGCGCATGTTCGTCGACAAGGCGCTCTCGAC
GCACCTCCACACGGGCTACGTCGAGTGGCAGGAGCGC
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