mRNA_P-wetherbeei_contig17061.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: A0A835ZAR5_9STRA (Ribonuclease H-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAR5_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.310e-19 Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 4 ESVFIVDLLILGNSRHVAALDAALAPMLGCRETIKLGQSFDADLRQLRAGFPAIRAFRKVEGVVELNALHFHCHGGGGRGAGHGTWKRDMVGLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAMRLKIGE 444
E+VF++DLL L A+D+AL + +K+G D+R+L +P + AFR++ GV+E NA+H +M+ L L YL LSKG+Q+S+W RPL Q+ YA+ D LV+L L+D+M L+I E
Sbjct: 120 EAVFLIDLLAL-LPLCAEAMDSALYHCFRSEDILKVGHGLVQDVRELYMFYPQVAAFRRMNGVLEANAMHKQLD----------PEVVNMLSLKKLVLHYLNCSLSKGQQMSNWANRPLSSSQIHYAACDALVLLRLHDSMVLEIFE 255
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: A0A2D4BG54_PYTIN (3'-5' exonuclease domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG54_PYTIN) HSP 1 Score: 91.7 bits (226), Expect = 3.470e-19 Identity = 54/152 (35.53%), Postives = 80/152 (52.63%), Query Frame = 1
Query: 1 EESVFIVDLLILGNSRHVAALDAALAPMLGCRETIKLGQSFDADLRQLRAGFPAIRAFRKVEGVVELNALHFHCHGGGGRGAGHGTWKRDMVGLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAM--RLKIGEWH 450
+E VFI+DLL L + + L + + IKLGQS DL++L + +P FR + VVE+N + G + L L +YLG+RL+K +Q+S+W RPL Q+ YA+ D LV++HLYD + RLK + H
Sbjct: 82 KEEVFILDLLKLKPHMY----NKTLLGLFLSQSVIKLGQSLLGDLKELASSYPGASCFRVAKAVVEVNDMSISLMGA-----------HQALSLQKLVFLYLGKRLTKTQQMSNWNRRPLTTSQIHYAACDALVLIHLYDVLLERLKANKPH 218
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: D8LQB4_ECTSI (3\'-5\' exonuclease family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB4_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 3.650e-19 Identity = 56/148 (37.84%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 1 EESVFIVDLLILGNSRHVA-ALDAALAPMLGCRETIKLGQSFDADLRQLRAGFPAIRAFRKVEGVVELNALHFHCHGGGGRGAGHGTWKRDMVGLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAMRLKIG 441
EE V ++DLL L + + +L AL+ G +KLG DL ++ F +V GV+ LNAL+ GG G RD+ GL L ++YLGR LSK +Q+S W RPL+ Q+ YA+ D LV L ++DA+ L +G
Sbjct: 32 EEDVLVIDLLSLKDGLLLPESLSEALSGPFGSPNVVKLGVGLANDLDEMSFAFEETPFLEQVPGVLNLNALNTKLTGGACNDQGI---PRDL-GLRKLASMYLGRSLSKRQQMSRWARRPLQSAQVNYAACDALVALRVFDALLLALG 175
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: A0A2T7NMS5_POMCA (3'-5' exonuclease domain-containing protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NMS5_POMCA) HSP 1 Score: 74.7 bits (182), Expect = 1.130e-12 Identity = 54/165 (32.73%), Postives = 82/165 (49.70%), Query Frame = 1
Query: 4 ESVFIVDLLILGNSRHVAALDAALAPMLGCRET-IKLGQSFDADLRQLRAGFPAI-RAFRKVEGVVELNAL------HFHCHGGGGRG----AGHGTWKRDMV---GLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAMRLKIGEWHL 453
+ VF++D++ L + LA + C E+ + LG +DL+ L FP + ++ VV+L L +FH G G + DMV GL+ L YLG++LSKGEQ+S W RPLR Q YA+LD V+L +Y ++ K+ + L
Sbjct: 484 DHVFLIDVINLASILEEKEWKQ-LAAAIFCNESNVTLGYGLHSDLKMLLKSFPCMSEELFNLKRVVDLEQLAKQVSPNFHVEFPGNAGDTAFTSRDVKETDMVDQRGLSALVQQYLGKQLSKGEQMSDWERRPLRPTQKTYAALDAYVLLEIYKQLKTKVQHYGL 647
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: A0A7S4PRF6_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PRF6_GUITH) HSP 1 Score: 65.5 bits (158), Expect = 1.730e-9 Identity = 40/133 (30.08%), Postives = 66/133 (49.62%), Query Frame = 1
Query: 61 LDAALAPMLGCRETIKLGQSFDADLRQLRAGFPAIRAFRKVEGVVE-----LNALHFHCHGGGGRGAGHGTWKRDMVGLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAMRLKIGE 444
L+ L P L + +KLG SF+ D++ L + FP + ++++ +V+ ++ H G R GL+ LG LSK QVS+W RPL ++Q+RYA+ D ++ LY + +I E
Sbjct: 248 LEEILGPFLLREDILKLGFSFEMDMKMLLSSFPRLLFLQQLQRLVDDHHAFVDIKHMVM--------ASGRLSRQNFGLSAACKSLLGHPLSKEMQVSNWNLRPLADEQIRYAATDAQCLVLLYRVLGPEIAE 372
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: A0A6A3CVQ4_HIBSY (Polynucleotidyl transferase isoform 3 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CVQ4_HIBSY) HSP 1 Score: 65.1 bits (157), Expect = 2.340e-9 Identity = 43/143 (30.07%), Postives = 68/143 (47.55%), Query Frame = 1
Query: 1 EESVFIVDLLILGNSRHVAALDAALAPMLGCRETIKLGQSFDADLRQLRAGFPAIRAFRKVEGVVELNALHFHCHGGGGRGAGHGTWKRDMVGLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAMR 429
++ VFI DL+ L LD L +L +KLG SF D++QL + ++ F+ ++++ L +K GL+ L LG L+K + S+W RPL + QL YASLD V++ L+ +R
Sbjct: 405 DKKVFIFDLIKLYEDVP-DVLDNCLTRILQSPRILKLGYSFQCDIKQLAQSYGDLKCFKSYNMLLDIQKL----------------FKDPRGGLSGLAEKILGAGLNKTRRNSNWEQRPLTQNQLEYASLDAAVLVELFYRVR 530
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: A0A524NT85_9BACT (3'-5' exonuclease domain-containing protein 2 n=1 Tax=Bacteroidia bacterium TaxID=2044936 RepID=A0A524NT85_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 6.650e-9 Identity = 40/117 (34.19%), Postives = 59/117 (50.43%), Query Frame = 1
Query: 82 MLGCRETIKLGQSFDADLRQLRAGFP-AIRAFRKVEGVVELNALHFHCHGGGGRGAGHGTWKRDMVGLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAMR 429
+L +K+G S DLR+LR+ F + F ++ VE ++ + GL L+AI LGRR+SK +QVS+W A L E QLRYA+ D + L +Y +R
Sbjct: 91 LLSRENPLKVGVSLHDDLRRLRSDFQFEPQGFLDLQQYVE-------------------AFRIEEKGLKKLSAIVLGRRISKSQQVSNWDADLLTEAQLRYAATDAWICLKIYYKLR 188
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: A0A1Y4AKM2_9BACT (3'-5' exonuclease n=1 Tax=Alistipes sp. An31A TaxID=1965631 RepID=A0A1Y4AKM2_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 7.590e-9 Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 1
Query: 61 LDAALAPMLGCRETIKLGQSFDADLRQLRAGFPAIRAFRKVEGVVELNALHFHCHGGGGRGAGHGTWKRDMVGLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAMR 429
L A L +LG + K+G DLR LR +R FR G V+L A+ W + L L+AI LG+R+SK +++S+W A L +KQL YA+ D V +YD ++
Sbjct: 89 LAAPLLHLLGSAKVQKVGADVAGDLRSLRQ----LRHFRDG-GFVDLQAIA-------------PDWGIEEKSLRKLSAIVLGKRVSKAQRLSNWEAAQLTDKQLLYAATDAWVCTEIYDKLQ 193
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: A0A813M426_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813M426_9BILA) HSP 1 Score: 63.2 bits (152), Expect = 1.120e-8 Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = 1
Query: 10 VFIVDLLILGNSRHVAALDAALAPMLGCRETIKLGQSFDADLRQLRAGFPAIR-AFRKV-EGVVELNALHFHCHGGGGRGAGHGTWKRDMV-GLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAMRLKIGE 444
VF+VD L + +D +L + IKLG FD D ++L FP + F + + V+ +N + G K GL+ LT G+ L K E +S+W RPLR Q+RYASLD V++ ++D ++ +I E
Sbjct: 527 VFVVDSRFLVDQLEEVDIDRFGNLVLFSEKIIKLGYDFDQDSKKLFHSFPKFKHVFSEFSDHVINVNQVISDFEKKYPLFTGMDQSKPVKTKGLSKLTECVFGKPLDKSECMSNWQNRPLRNDQIRYASLDAYVLIEIHDFLQKRIKE 674
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Match: A0A7S0DV66_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DV66_9CRYP) HSP 1 Score: 62.0 bits (149), Expect = 2.300e-8 Identity = 40/133 (30.08%), Postives = 63/133 (47.37%), Query Frame = 1
Query: 61 LDAALAPMLGCRETIKLGQSFDADLRQLRAGFPAIRAFRKVEGVVE-----LNALHFHCHGGGGRGAGHGTWKRDMVGLAPLTAIYLGRRLSKGEQVSSWGARPLREKQLRYASLDVLVMLHLYDAMRLKIGE 444
LD L L + +KLG SF+ D++ L A FP + ++++ +V+ ++ H G GL+ LG LSK QVS+W RPL E+Q+RYA+ D ++ LY + + E
Sbjct: 194 LDEILGSFLVREDILKLGFSFEMDMKMLLASFPRLLFLQELQRLVDQHHAFVDIKHMVI--------ASGRMNNQGFGLSAACKNLLGNPLSKEMQVSNWKLRPLSEEQIRYAATDAQCLVLLYRCLGPDLAE 318 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17061.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17061.1.1 >prot_P-wetherbeei_contig17061.1.1 ID=prot_P-wetherbeei_contig17061.1.1|Name=mRNA_P-wetherbeei_contig17061.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp EESVFIVDLLILGNSRHVAALDAALAPMLGCRETIKLGQSFDADLRQLRAback to top mRNA from alignment at P-wetherbeei_contig17061:603..1397- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17061.1.1 ID=mRNA_P-wetherbeei_contig17061.1.1|Name=mRNA_P-wetherbeei_contig17061.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig17061:603..1397- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17061:603..1397- >mRNA_P-wetherbeei_contig17061.1.1 ID=mRNA_P-wetherbeei_contig17061.1.1|Name=mRNA_P-wetherbeei_contig17061.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig17061:603..1397- (Phaeothamnion wetherbeei SAG_119_79)back to top |