mRNA_P-wetherbeei_contig17059.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig17059.1.1 vs. uniprot
Match: A0A7X8XL73_9BURK (Peptidoglycan DD-metalloendopeptidase family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XL73_9BURK) HSP 1 Score: 249 bits (635), Expect = 3.700e-75 Identity = 147/386 (38.08%), Postives = 227/386 (58.81%), Query Frame = 1
Query: 70 KVPMVLKKLETRYNISGSMPTMTIPGTHAARDLADLVAIEQKYFPGACVTAGFYDWRTTSQYRSHAGLHLGYDIAMPYGCKFGAGWPGVVTAIAVWSGEEHGITVQSPDGTTVTYGHVSPRVTVGQQIVAGQPLGVIARDHVDVKMRDAAGNYQDYGGTGRVLPAPTWAAATWAPVAPSRETLMAEWLMASNNYDMAKQELDQFVHTNSQRKLEREQLLRRLPALKKSVAMMAQYVDQGLVARVTVEENRDELEKAKERLKKLDKDVSQDSGQLKTLQANVSAAQERLNTAKSQARTIGLSFGDVERFVNATINNDTSLRKNVEAYKRAAATKNASQLAKVESDLRENEKSLKSLEELYEIGGVAKNDLASAREKHRMLMSHMRAL 1227
+VP V+ L TR+ ++ T G A D+ LVA+++ P A +T+GFYDWRT S+YR + GLHLGYDIAMP G AGWPG V ++A W+ E G+TV+S GT VTYGH+ P ++ G + G +G I+ DHVDVKMRD+AGNY D+GG +AA A SRE M WL+A N+ + ++ EL+ + LER +L R L+++V +MA+YV++GLV+R E+ R +L + L +L K + ++ L+ V AA+ RL + +AR G+++ +V FVN + D LR V YKR ++ ++ ++R ++L LE LYE+GG+ + ++ +ARE+ ++L + +++L
Sbjct: 31 QVPAVIDALRTRFGVTD---LSTSEGKVA--DITGLVALQRTLCPEAVLTSGFYDWRTVSRYRRNPGLHLGYDIAMPAGTPVRAGWPGTVVSVAPWTEGEWGLTVRSASGTEVTYGHIRPSLSAGDPVQVGTIVGTISIDHVDVKMRDSAGNYVDFGGQASASATTPFAAFA----ADSREAQMVTWLVARNSLETSESELEGRRREKASAALERRRLESRRVELEQAVPLMARYVEEGLVSRAEAEKTRSDLATTLQALARLKKRQKEAPERIAELENQVRAARSRLAVVERRARQRGITWAEVTGFVNGVVARDARLRDQVLDYKRDKQETRTRRVGELRQEVRAGRQNLAELENLYEMGGLPRREIEAARERQQILEAELKSL 407
BLAST of mRNA_P-wetherbeei_contig17059.1.1 vs. uniprot
Match: A0A355TR23_9BACT (Uncharacterized protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TR23_9BACT) HSP 1 Score: 225 bits (574), Expect = 6.180e-66 Identity = 149/412 (36.17%), Postives = 227/412 (55.10%), Query Frame = 1
Query: 10 AMLAGTLLATAATAQEIPNRK-VPMVLKKLETRYNISGSMPTMTIPGTHAA---RDLADLVAIEQKYFPGACVTAGFYDWRTTSQYRSHAGLHLGYDIAMPYGCKFGAGWPGVVTAIAVWSGEEHGITVQSPDGTTVTYGHVSPRVTVGQQIVAGQPLGVIARDHVDVKMRDAAGNYQDYGGTGRVLPAPTWAAATWAPVAPSRETLMAEWLMASNNYDMAKQELDQFVHTNSQRKLEREQLLRRLPALKKSVAMMAQYVDQGLVARVTVEENRDELEKAKERLKKLDKDVSQDSGQLKTLQANVSAAQERLNTAKSQARTIGLSFGDVERFVNATINNDTSLRKNVEAYKRAAATKNASQLAKVESDLRENEKSLKSLEELYEIGGVAKNDLASAREKHRMLMSHMRALRA 1233
A+LA +AA A++ P+ VP V+K + +Y MP+ T P A L DLV ++++ ACVT+ FYD+R+ S YR AGLHLGYDIAM G AGWPG V +IA W+ E G+TV S +G VTYGH+ P +GQ I G +G IA +HVDVKMR A G Y +G + A A SRE LM WL A NN + K+E++ N ++ER++L R + ++ M +Y + GLV+R VE+ R L K+ ++ ++K LQ + +R A+ +A+ GLS+ DV+ FVN + D +L K V+ YK+ +L +V+S+L + E++L S EEL+E+GG+ + ++ + R++ + L ++ L++
Sbjct: 16 AVLACLFSPSAALAEKKPSSAAVPEVIKAAQKKYG----MPSATKPTPAAVPQITSLTDLVNLQRQSCSWACVTSTFYDYRSVSMYRRRAGLHLGYDIAMQAGTAARAGWPGTVVSIAPWADGEWGVTVASSNGIEVTYGHIVPVARLGQVINVGDTVGTIAVNHVDVKMRGADGAYIPFGEKDKQA---VMAGALQVQPVTSREQLMVAWLSAYNNEETVKEEVEARARENKLDQIERKKLEERYTEKRLALRNMEKYFEDGLVSRREVEQTRXXXXXXXXDLLKVKTSQKENPSRIKKLQKQLDLCHKRTLKAQQEAQKRGLSWQDVQNFVNNLVAKDQNLSKTVKNYKKDKQDAYIQELLQVKSELSQCERTLSSQEELFEVGGLPQKEIDATRQRQKALQQRLKELQS 420
BLAST of mRNA_P-wetherbeei_contig17059.1.1 vs. uniprot
Match: A0A1V5PNW2_9BACT (Peptidase family M23 n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PNW2_9BACT) HSP 1 Score: 139 bits (351), Expect = 2.280e-33 Identity = 70/160 (43.75%), Postives = 99/160 (61.88%), Query Frame = 1
Query: 91 KLETRYNISGS----MPTMTIPG-------THAARDLADLVAIEQKYFPGACVTAGFYDWRTTSQYRSHAGLHLGYDIAMPYGCKFGAGWPGVVTAIAVWSGEEHGITVQSPDGTTVTYGHVSPRVTVGQQIVAGQPLGVIARDHVDVKMRDAAGNYQDY 537
K++ + N++G+ + TIP T L D + + +KYFP A +T F +WR S+YR+ AGLH GYDI + G K AGWPG+VTA+ W GEE+GITV S DG ++TYGHV P V VGQ++ + + DHVD+KM+D+ GN+ D+
Sbjct: 49 KIKLKTNLAGARLKFLQLSTIPDHSTKITTTSTISPLMDYLNLTRKYFPAAEITGRFREWRNISKYRAQAGLHNGYDIYLEKGTKIPAGWPGIVTAVTPWYGEEYGITVLSHDGKSMTYGHVKPLVVVGQRVSRDYIIALCWSDHVDIKMKDSEGNFIDF 208
BLAST of mRNA_P-wetherbeei_contig17059.1.1 vs. uniprot
Match: A0A7Z9PU69_9BACT (M23 family metallopeptidase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PU69_9BACT) HSP 1 Score: 127 bits (318), Expect = 1.550e-30 Identity = 62/128 (48.44%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 154 AARDLADLVAIEQKYFPGACVTAGFYDWRTTSQYRSHAGLHLGYDIAMPYGCKFGAGWPGVVTAIAVWSGEEHGITVQSPDGTTVTYGHVSPRVTVGQQIVAGQPLGVIARDHVDVKMRDAAGNYQDY 537
A +L L+ ++ GA V++GF+DWRT S+YRS AG+H GYDIAM G + A W G V AI+ W G E+G+TV+S G TYGH+SP V VG+ + +G LG + DHVDVK+RD G+ D+
Sbjct: 16 AVAELERLLEFQKVGDTGAFVSSGFHDWRTVSKYRSRAGIHGGYDIAMLAGTEVRAAWSGEVVAISRWYGSEYGVTVRSSTGHEATYGHISPLVRVGEAVKSGDVLGTVVVDHVDVKVRDRFGSLVDF 143
BLAST of mRNA_P-wetherbeei_contig17059.1.1 vs. uniprot
Match: A0A1V5PAJ0_9BACT (Peptidase family M23 n=1 Tax=bacterium ADurb.Bin363 TaxID=1866927 RepID=A0A1V5PAJ0_9BACT) HSP 1 Score: 126 bits (317), Expect = 1.710e-28 Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = 1
Query: 163 DLADLVAIEQKYFPGACVTAGFYDWRTTSQYRSHAGLHLGYDIAMPYGCKFGAGWPGVVTAIAVWSGEEHGITVQSPDGTTVTYGHVSPRVTVGQQIVAGQPLGVIARDHVDVKMRDAAGNYQDYG 540
+L + I +K +P A ++ FY+WR S+YR AGLH GYDIA+P G AGW G V I W G+E+G+TV+S VTYGH+ P V GQ+I+ G +G + DHVD+KM+D+ NY D+G
Sbjct: 94 NLNQYMDIVKKIYPSAVISGTFYEWRDISKYRRVAGLHDGYDIALPSGTPVVAGWEGEVVDICPWYGQEYGVTVKSTGDIYVTYGHIVPMVKTGQKIMIGSIIGFVVIDHVDIKMKDSKNNYIDFG 219
BLAST of mRNA_P-wetherbeei_contig17059.1.1 vs. uniprot
Match: A0A7Z9UDN3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UDN3_9BACT) HSP 1 Score: 109 bits (272), Expect = 5.680e-25 Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 166 LADLVAIEQKYFPGACVTAGFYDWRTTSQYRSHAGLHLGYDIAMPYGCKFGAGWPGVVTAIAVWSGEEHGITVQSPDGTTVTYGH 420
L L+ ++QK +P A +++ FYD+RTTS+YR AGLHLGYDIA+P+G + GWPG V AI W+ E+G+TV S DGT VTYGH
Sbjct: 64 LGHLLGLQQKNWPAAWISSTFYDYRTTSKYRRQAGLHLGYDIALPFGARVSTGWPGRVVAIVPWTDTEYGVTVASADGTEVTYGH 148 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17059.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig17059.1.1 >prot_P-wetherbeei_contig17059.1.1 ID=prot_P-wetherbeei_contig17059.1.1|Name=mRNA_P-wetherbeei_contig17059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=412bp MLAGTLLATAATAQEIPNRKVPMVLKKLETRYNISGSMPTMTIPGTHAARback to top mRNA from alignment at P-wetherbeei_contig17059:136..1383+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig17059.1.1 ID=mRNA_P-wetherbeei_contig17059.1.1|Name=mRNA_P-wetherbeei_contig17059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1248bp|location=Sequence derived from alignment at P-wetherbeei_contig17059:136..1383+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig17059:136..1383+ >mRNA_P-wetherbeei_contig17059.1.1 ID=mRNA_P-wetherbeei_contig17059.1.1|Name=mRNA_P-wetherbeei_contig17059.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1236bp|location=Sequence derived from alignment at P-wetherbeei_contig17059:136..1383+ (Phaeothamnion wetherbeei SAG_119_79)back to top |