mRNA_P-wetherbeei_contig17054.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig17054.1.1
Unique NamemRNA_P-wetherbeei_contig17054.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A127EW47_9HYPH (ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EW47_9HYPH)

HSP 1 Score: 409 bits (1051), Expect = 2.940e-135
Identity = 213/251 (84.86%), Postives = 227/251 (90.44%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKRRSAPRRKPPG--SDGEPPPRGGS-VPKVPLVKA 744
            DQ+PH VLLLDEIEKAHPDLFNVLLQIMDHG+LTDHNGKQV FRNVILIMTTNAGA+DMAKAAFGFTRQKREG+DTEAINRLFAPEFRNRLDAT+TFAHLSP VIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRV+VVKDE G DKLGFEF++GP TP+PEK+P     KP+   + ++K  G   DG   PRGGS VPKVPLVKA
Sbjct:  566 DQYPHSVLLLDEIEKAHPDLFNVLLQIMDHGKLTDHNGKQVDFRNVILIMTTNAGAADMAKAAFGFTRQKREGEDTEAINRLFAPEFRNRLDATVTFAHLSPEVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVIVVKDEIGKDKLGFEFLDGPATPKPEKVPEKRARKPRPSGSRKKKSDGPKDDGSGGPRGGSTVPKVPLVKA 816          
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A1Q4DPA9_9HYPH (ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DPA9_9HYPH)

HSP 1 Score: 397 bits (1021), Expect = 7.210e-131
Identity = 205/249 (82.33%), Postives = 225/249 (90.36%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKRRSAPRRKPPGS-DGEPPPRGGSVPKVPLVKA 744
            DQHPH VLLLDEIEKAHPDLFNVLLQIMDHG+LTDHNGKQV FRNVILIMTTNAGASDM+KAA+GFTR KREGDD EAINRLFAPEFRNRLDA +TFAHLSPA+IA+VVEKFVLQLEAQLADR VTI LS+EASRWLIANGYDELMGARPMARVIQEHIKK LA+EVLFG+LK GGHVRVV++KD+ G +KLGFE+++GPV P+P+K+P     K KRRSAPRRKP G  DG+PP   GSVPKVPLVKA
Sbjct:  562 DQHPHSVLLLDEIEKAHPDLFNVLLQIMDHGKLTDHNGKQVDFRNVILIMTTNAGASDMSKAAYGFTRSKREGDDVEAINRLFAPEFRNRLDAIVTFAHLSPAIIAQVVEKFVLQLEAQLADRGVTISLSDEASRWLIANGYDELMGARPMARVIQEHIKKPLAEEVLFGRLKSGGHVRVVLIKDDAGREKLGFEYLDGPVKPKPDKLPEPG-VKAKRRSAPRRKPKGGGDGDPP--RGSVPKVPLVKA 807          
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A1W6ZVY1_9HYPH (ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZVY1_9HYPH)

HSP 1 Score: 392 bits (1007), Expect = 1.120e-128
Identity = 208/255 (81.57%), Postives = 222/255 (87.06%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKRRSAPRR-KPPGSDGEP-------PPRGGSVPKVPLVK 741
            DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHG+LTDHNGKQVSFRNVILIMTTNAGA+D+AK  +GFTR KREGDD EAINRLFAPEFRNRLDATITFAHLS  VI+KVVEKFVLQLEAQLADRNVTIELS+EASRWLIANGYDELMGARPMARVIQE+IKK LADEVLFGKLK GGHV+VVVVK+E G D LGFE+VEGPVTP+PEK+PA   AKPKR+   R+ KPP   G         P   GSVPKVPLVK
Sbjct:  562 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGKLTDHNGKQVSFRNVILIMTTNAGAADLAKGTYGFTRNKREGDDVEAINRLFAPEFRNRLDATITFAHLSQDVISKVVEKFVLQLEAQLADRNVTIELSDEASRWLIANGYDELMGARPMARVIQENIKKPLADEVLFGKLKDGGHVKVVVVKNEAGRDALGFEYVEGPVTPKPEKLPAAG-AKPKRKPPQRKPKPPSGSGXXXXXXGTDPSGRGSVPKVPLVK 815          
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A833LNK8_9HYPH (AAA domain-containing protein n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833LNK8_9HYPH)

HSP 1 Score: 382 bits (980), Expect = 4.170e-128
Identity = 206/252 (81.75%), Postives = 222/252 (88.10%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKR-RSAPRR-KPP-GSDGEPPPRG-GSVPKVPLVKA 744
            DQHPHCVLLLDEIEKAHPDL+NVLLQIMDHG+LTDHNGKQV FRNVILIMTTNAGA+D+AK  +GFTR +REGDD EAINRLFAPEFRNRLDA ITF HLS  VI+KVVEKFVLQLEAQLADRNVTIELS+EASRWLIANGYDELMGARPMARVIQE+IKK LADEVLFG+LKGGGHVRVVVVK+E G D LGFE+++GPVTP+PEKIP     KP+R RS PRR KPP GS       G GSVPKVPLVKA
Sbjct:  281 DQHPHCVLLLDEIEKAHPDLYNVLLQIMDHGKLTDHNGKQVVFRNVILIMTTNAGAADLAKGTYGFTRNRREGDDIEAINRLFAPEFRNRLDAIITFHHLSEEVISKVVEKFVLQLEAQLADRNVTIELSDEASRWLIANGYDELMGARPMARVIQENIKKPLADEVLFGRLKGGGHVRVVVVKNEQGRDVLGFEYLDGPVTPKPEKIPE---RKPRRKRSGPRRPKPPSGSXXXXXSSGRGSVPKVPLVKA 529          
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A0Q7TTB4_9HYPH (ATP-dependent Clp protease ATP-binding subunit ClpA n=4 Tax=Pseudolabrys TaxID=556257 RepID=A0A0Q7TTB4_9HYPH)

HSP 1 Score: 386 bits (991), Expect = 2.630e-126
Identity = 204/252 (80.95%), Postives = 222/252 (88.10%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKRRSAPR---RKPPGSD-GEPPPRGGSVPKVPLVKA 744
            DQHPH VLLLDEIEKAHPDLFNVLLQ+MDHG+LTDHNGKQV FRNVILIMTTNAGASDMAKAA+GFTR KREG+D +AINRLF PEFRNRLDATITF HL  AVI++VVEKFVLQLEAQL DRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKK LADEVLFG LK GGHVRVVV KDENG DKLGFEF++GPVTP+PEK+PA  + K KRR++P+    KP G + G+     GSVPKVPL+KA
Sbjct:  564 DQHPHSVLLLDEIEKAHPDLFNVLLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGASDMAKAAYGFTRTKREGEDQDAINRLFTPEFRNRLDATITFGHLPQAVISQVVEKFVLQLEAQLGDRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKPLADEVLFGHLKNGGHVRVVVEKDENGRDKLGFEFLDGPVTPKPEKLPAD-KPKAKRRASPKPRSNKPKGDNKGDGNGGKGSVPKVPLLKA 814          
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A537PLF1_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpA n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A537PLF1_9PROT)

HSP 1 Score: 382 bits (981), Expect = 6.550e-125
Identity = 198/247 (80.16%), Postives = 215/247 (87.04%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKRRSAPRRKPPGSDGEPPPRGGSVPKVPLVK 741
            DQHPHCVLLLDE+EKAHPDLFNVLLQIMDHG+LTDHNGKQV FRNVILIMTTNAGA+D+A+ A+GFTR KREGDD EAINRLFAPEFRNRLDA ITFAHL+P +IAKVV+KFVLQLEAQL DR  TIELSEEAS WLI +GYDE MGARPMAR+IQE IKK LADEVLFGKLK GGHVRVV+ KDE+G +KLGFE++EGPVTP+PEKIP   R   KRRS PRRKP G  G  P   GSVPKVPLVK
Sbjct:  562 DQHPHCVLLLDEVEKAHPDLFNVLLQIMDHGKLTDHNGKQVDFRNVILIMTTNAGAADLARQAYGFTRIKREGDDVEAINRLFAPEFRNRLDAIITFAHLTPEIIAKVVDKFVLQLEAQLGDRGATIELSEEASNWLIKHGYDEQMGARPMARLIQESIKKPLADEVLFGKLKAGGHVRVVMTKDESGVEKLGFEYLEGPVTPKPEKIPEAKR---KRRS-PRRKPSGPKGGGPSPRGSVPKVPLVK 804          
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A363TIU7_9BRAD (ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TIU7_9BRAD)

HSP 1 Score: 375 bits (963), Expect = 3.520e-122
Identity = 194/247 (78.54%), Postives = 216/247 (87.45%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKRRSAPRR--KPPGSDGEPPPRGGSVPKVPL 735
            DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHG+LTDHNGKQV FRNVILIMTTNAGA+D+AK AFGFTR KREGDD EAIN+LFAPEFRNRLDA ITFAHLS  VI++VVEKFVLQLEAQLADR+VTIEL++EASRWLIA+GYDE MGARPMAR IQEHIKK LADEVLFG+LK GGHVRV++VK E G +KLGFE++EG VTP+PE++P   +A+ K R  P+R  KPP  DG  P   GSVPKVPL
Sbjct:  562 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGKLTDHNGKQVDFRNVILIMTTNAGAADLAKQAFGFTRSKREGDDIEAINKLFAPEFRNRLDAIITFAHLSEEVISRVVEKFVLQLEAQLADRDVTIELTDEASRWLIAHGYDEQMGARPMARQIQEHIKKPLADEVLFGRLKSGGHVRVILVK-EGGAEKLGFEYLEGRVTPKPERLPEPRKARAKTRRTPQRRPKPPRGDGGKPSGRGSVPKVPL 807          
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A537QB42_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpA n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A537QB42_9PROT)

HSP 1 Score: 375 bits (962), Expect = 3.780e-122
Identity = 191/247 (77.33%), Postives = 215/247 (87.04%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKRRSAPRRKPPGSDGEPPPRGGSVPKVPLVK 741
            DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHG+LTDHNGKQV FRNV+LIMTTNAGAS++AK A+GFTR KREGDD EAINR+F PEFRNRLDA ITFAHL+PAVIA+VVEKFV+QLEAQLADR V+IELSEEAS+WLIA+G+DE MGARPMAR IQEHIKK LADEVLFGKLK GGHVRV+VVKDE+G +KL FE+++G VTP+PE++P   RAKP+         P  DG   PR GSVPKVPL+K
Sbjct:  562 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGKLTDHNGKQVDFRNVVLIMTTNAGASELAKQAYGFTRSKREGDDIEAINRMFMPEFRNRLDAIITFAHLTPAVIARVVEKFVMQLEAQLADRAVSIELSEEASQWLIAHGFDEQMGARPMARTIQEHIKKPLADEVLFGKLKTGGHVRVIVVKDEDGAEKLRFEYLDGRVTPKPERLPEPRRAKPEG--------PKGDG---PRRGSVPKVPLIK 797          
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A537L8D0_9PROT (ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L8D0_9PROT)

HSP 1 Score: 373 bits (958), Expect = 2.110e-121
Identity = 192/250 (76.80%), Postives = 216/250 (86.40%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKRRSAPRR-KPPG--SDGEPPPRGGSVPKVPLVK 741
            DQH HCVLLLDEIEKAHPDLFNVLLQIMDHG+LTDHNGKQV FRNVILIMTTNAGA+D+A++A+GFTR KREGDD EAINR+FAPEFRNRLDATITFAHLS  VIAKVV KFV+QLEAQLADRNVTIEL++EA++WL+  GYDE MGARPMARVIQEHIKK LAD VLFG LK GGHVRVVV KDE+G +KL FE+ EGP+TP+ EK+P   + + KRR+ PR+ +PPG    G PP   GSVPKVPLVK
Sbjct:  562 DQHLHCVLLLDEIEKAHPDLFNVLLQIMDHGKLTDHNGKQVDFRNVILIMTTNAGAADLARSAYGFTRTKREGDDVEAINRMFAPEFRNRLDATITFAHLSEEVIAKVVTKFVMQLEAQLADRNVTIELTDEAAKWLMTKGYDEQMGARPMARVIQEHIKKPLADVVLFGVLKTGGHVRVVVAKDEDGNEKLSFEYPEGPITPKQEKLPEPRKNRVKRRAGPRKPRPPGPKGGGTPPSGRGSVPKVPLVK 811          
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Match: A0A7C9VR45_9BRAD (AAA domain-containing protein (Fragment) n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7C9VR45_9BRAD)

HSP 1 Score: 361 bits (926), Expect = 6.720e-121
Identity = 188/247 (76.11%), Postives = 210/247 (85.02%), Query Frame = 1
Query:    1 DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIMTTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHLSPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGPVTPRPEKIPAVARAKPKRRSAPRRKPPGSDGEPPPRGGSVPKVPLVK 741
            DQHPHCV+LLDEIEKAHPDL+NVLLQIMDHG+LTDHNGKQV+FRNVILIMTTNAGA+D+A+ AFGFTR KREGDD EAINR FAPEFRNRLDA ++FAHL+  VI  VVEKFVLQLEAQLADR+VTIELSE    WLI +GYDE MGARPMAR+IQEH+KK LADEVLFGKLKGGGHVRVV+VKDE   DK+GFEFVEGPVTP+PEK+P       ++RSAPR KP G DG   P+G   P  PL+K
Sbjct:  223 DQHPHCVVLLDEIEKAHPDLYNVLLQIMDHGKLTDHNGKQVNFRNVILIMTTNAGAADLARQAFGFTRNKREGDDQEAINRQFAPEFRNRLDAIVSFAHLNTDVIGMVVEKFVLQLEAQLADRDVTIELSEPPKAWLIEHGYDEQMGARPMARIIQEHVKKPLADEVLFGKLKGGGHVRVVLVKDEQDVDKIGFEFVEGPVTPKPEKLPGS-----RKRSAPR-KPKGGDG---PKG---PTKPLMK 457          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17054.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EW47_9HYPH2.940e-13584.86ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A1Q4DPA9_9HYPH7.210e-13182.33ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A1W6ZVY1_9HYPH1.120e-12881.57ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A833LNK8_9HYPH4.170e-12881.75AAA domain-containing protein n=1 Tax=Pseudorhodop... [more]
A0A0Q7TTB4_9HYPH2.630e-12680.95ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A537PLF1_9PROT6.550e-12580.16ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A363TIU7_9BRAD3.520e-12278.54ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A537QB42_9PROT3.780e-12277.33ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A537L8D0_9PROT2.110e-12176.80ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A7C9VR45_9BRAD6.720e-12176.11AAA domain-containing protein (Fragment) n=2 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17054contigP-wetherbeei_contig17054:3..749 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1187851.A33M_2728
Preferred nameclpA
PFAMsAAA,AAA_2,ClpB_D2-small,Clp_N
Model size747
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03694
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043335,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564
Exons1
Evalue1.01e-121
EggNOG OGsCOG0542@1|root,COG0542@2|Bacteria,1MV8B@1224|Proteobacteria,2TQUZ@28211|Alphaproteobacteria,3FCND@34008|Rhodovulum
DescriptionC-terminal, D2-small domain, of ClpB protein
Cds size747
COG categoryO
BRITEko00000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186106.3488643-CDS-P-wetherbeei_contig17054:2..7491683186106.3488643-CDS-P-wetherbeei_contig17054:2..749Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig17054 3..749 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17054.1.1prot_P-wetherbeei_contig17054.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig17054 3..749 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig17054.1.1

>prot_P-wetherbeei_contig17054.1.1 ID=prot_P-wetherbeei_contig17054.1.1|Name=mRNA_P-wetherbeei_contig17054.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp
DQHPHCVLLLDEIEKAHPDLFNVLLQIMDHGRLTDHNGKQVSFRNVILIM
TTNAGASDMAKAAFGFTRQKREGDDTEAINRLFAPEFRNRLDATITFAHL
SPAVIAKVVEKFVLQLEAQLADRNVTIELSEEASRWLIANGYDELMGARP
MARVIQEHIKKGLADEVLFGKLKGGGHVRVVVVKDENGGDKLGFEFVEGP
VTPRPEKIPAVARAKPKRRSAPRRKPPGSDGEPPPRGGSVPKVPLVKA*
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mRNA from alignment at P-wetherbeei_contig17054:3..749+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig17054.1.1 ID=mRNA_P-wetherbeei_contig17054.1.1|Name=mRNA_P-wetherbeei_contig17054.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig17054:3..749+ (Phaeothamnion wetherbeei SAG_119_79)
GACCAGCATCCGCATTGCGTGCTCCTGCTCGACGAGATCGAGAAGGCGCA TCCGGATCTGTTCAACGTGCTGCTGCAGATCATGGATCATGGCCGGCTCA CCGACCACAACGGCAAGCAGGTCAGCTTCCGCAACGTGATCCTCATTATG ACCACGAACGCCGGCGCGTCCGACATGGCCAAGGCGGCGTTCGGCTTCAC CCGGCAGAAGCGTGAGGGCGACGACACCGAGGCGATCAATCGCTTGTTCG CGCCGGAGTTCCGCAACCGGCTCGATGCGACGATCACCTTCGCGCATCTG TCGCCGGCGGTCATCGCCAAGGTGGTCGAGAAGTTCGTCCTCCAGCTTGA GGCGCAACTCGCCGACCGCAACGTCACGATCGAGCTGTCGGAAGAGGCCT CGCGCTGGCTGATCGCCAACGGTTACGACGAACTGATGGGTGCCCGGCCG ATGGCGCGGGTGATCCAGGAGCACATCAAGAAGGGACTGGCCGACGAGGT TCTGTTCGGCAAGCTCAAGGGTGGCGGCCACGTCCGGGTCGTCGTGGTCA AGGACGAGAACGGCGGCGACAAGCTCGGCTTCGAGTTCGTCGAGGGGCCG GTCACGCCGAGACCCGAGAAAATCCCGGCTGTGGCGCGCGCCAAGCCGAA GCGCCGTTCCGCGCCGCGGCGCAAGCCGCCCGGCAGCGACGGCGAACCGC CGCCGCGCGGGGGCTCGGTGCCCAAGGTGCCGCTGGTCAAAGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig17054:3..749+

>mRNA_P-wetherbeei_contig17054.1.1 ID=mRNA_P-wetherbeei_contig17054.1.1|Name=mRNA_P-wetherbeei_contig17054.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig17054:3..749+ (Phaeothamnion wetherbeei SAG_119_79)
GACCAGCATCCGCATTGCGTGCTCCTGCTCGACGAGATCGAGAAGGCGCA
TCCGGATCTGTTCAACGTGCTGCTGCAGATCATGGATCATGGCCGGCTCA
CCGACCACAACGGCAAGCAGGTCAGCTTCCGCAACGTGATCCTCATTATG
ACCACGAACGCCGGCGCGTCCGACATGGCCAAGGCGGCGTTCGGCTTCAC
CCGGCAGAAGCGTGAGGGCGACGACACCGAGGCGATCAATCGCTTGTTCG
CGCCGGAGTTCCGCAACCGGCTCGATGCGACGATCACCTTCGCGCATCTG
TCGCCGGCGGTCATCGCCAAGGTGGTCGAGAAGTTCGTCCTCCAGCTTGA
GGCGCAACTCGCCGACCGCAACGTCACGATCGAGCTGTCGGAAGAGGCCT
CGCGCTGGCTGATCGCCAACGGTTACGACGAACTGATGGGTGCCCGGCCG
ATGGCGCGGGTGATCCAGGAGCACATCAAGAAGGGACTGGCCGACGAGGT
TCTGTTCGGCAAGCTCAAGGGTGGCGGCCACGTCCGGGTCGTCGTGGTCA
AGGACGAGAACGGCGGCGACAAGCTCGGCTTCGAGTTCGTCGAGGGGCCG
GTCACGCCGAGACCCGAGAAAATCCCGGCTGTGGCGCGCGCCAAGCCGAA
GCGCCGTTCCGCGCCGCGGCGCAAGCCGCCCGGCAGCGACGGCGAACCGC
CGCCGCGCGGGGGCTCGGTGCCCAAGGTGCCGCTGGTCAAAGCCTGA
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